RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
TSPAN3-207ENST00000559494 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
TSPAN3-207ENST00000559494 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
TSPAN3-207ENST00000559494 LGALS3P17931 250 aaKnown RBP12.56□□□□□ -0.4
TSPAN3-207ENST00000559494 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
TSPAN3-207ENST00000559494 PSORS1C2Q9UIG4 136 aa12.55□□□□□ -0.4
TSPAN3-207ENST00000559494 MYCBP2O75592 4640 aa12.54□□□□□ -0.4
TSPAN3-207ENST00000559494 NMUP48645 174 aa12.54□□□□□ -0.4
TSPAN3-207ENST00000559494 ANKRD39Q53RE8 183 aa12.54□□□□□ -0.4
TSPAN3-207ENST00000559494 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
TSPAN3-207ENST00000559494 TP73-AS1Q9UF72 201 aa12.53□□□□□ -0.4
TSPAN3-207ENST00000559494 IGLV5-37A0A075B6J1 123 aa12.52□□□□□ -0.41
TSPAN3-207ENST00000559494 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
TSPAN3-207ENST00000559494 SCGB1D1O95968 90 aa12.52□□□□□ -0.41
TSPAN3-207ENST00000559494 AKR1D1P51857 326 aa12.51□□□□□ -0.41
TSPAN3-207ENST00000559494 VPREB1P12018 145 aa12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 UBE2BP63146 152 aa12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 LBHQ53QV2 105 aaPredicted RBP12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 Q8NDZ9 215 aa12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
TSPAN3-207ENST00000559494 LINC00167Q96N53 147 aa12.49□□□□□ -0.41
TSPAN3-207ENST00000559494 LRP1Q07954 4544 aaKnown RBP12.48□□□□□ -0.41
TSPAN3-207ENST00000559494 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
TSPAN3-207ENST00000559494 A0A0J9YXY3 114 aa12.47□□□□□ -0.41
TSPAN3-207ENST00000559494 SRSF9Q13242 221 aaKnown RBP eCLIP12.47□□□□□ -0.41
TSPAN3-207ENST00000559494 C1orf137Q5JT78 98 aa12.47□□□□□ -0.41
TSPAN3-207ENST00000559494 RPL24P83731 157 aaKnown RBP12.46□□□□□ -0.41
TSPAN3-207ENST00000559494 DAND5Q8N907 189 aa12.46□□□□□ -0.41
TSPAN3-207ENST00000559494 NKAPP1Q8N9T2 125 aa12.46□□□□□ -0.41
TSPAN3-207ENST00000559494 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
TSPAN3-207ENST00000559494 RPL37AP8A6NKH3 93 aa12.44□□□□□ -0.42
TSPAN3-207ENST00000559494 JOSD1Q15040 202 aaPredicted RBP12.44□□□□□ -0.42
TSPAN3-207ENST00000559494 ZNF815PA8K554 130 aa12.43□□□□□ -0.42
TSPAN3-207ENST00000559494 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
TSPAN3-207ENST00000559494 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
TSPAN3-207ENST00000559494 PCP2Q8IVA1 136 aa12.42□□□□□ -0.42
TSPAN3-207ENST00000559494 BOD1L2Q8IYS8 172 aa12.42□□□□□ -0.42
TSPAN3-207ENST00000559494 LOC107984156A0A0G2JMH3 177 aa12.41□□□□□ -0.42
TSPAN3-207ENST00000559494 HSBP1L1C9JCN9 74 aa12.41□□□□□ -0.42
TSPAN3-207ENST00000559494 ARL17AQ8IVW1 177 aa12.41□□□□□ -0.42
TSPAN3-207ENST00000559494 SPINK6Q6UWN8 80 aa12.4□□□□□ -0.42
TSPAN3-207ENST00000559494 PYY3Q5JQD4 70 aa12.39□□□□□ -0.43
TSPAN3-207ENST00000559494 LITAFQ99732 161 aa12.39□□□□□ -0.43
TSPAN3-207ENST00000559494 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 KRTAP29-1A8MX34 341 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 EIF4EBP3O60516 100 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 IGKV2-28A0A075B6P5 120 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 M0R378 163 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 TIMM17BO60830 172 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 IGKV2D-28P01615 120 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
TSPAN3-207ENST00000559494 OXTP01178 125 aa12.36□□□□□ -0.43
TSPAN3-207ENST00000559494 DMBT1Q9UGM3 2413 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-207ENST00000559494 NCR3O14931 201 aa12.35□□□□□ -0.43
TSPAN3-207ENST00000559494 NPC2P61916 151 aa12.35□□□□□ -0.43
TSPAN3-207ENST00000559494 BCE1O60756 84 aa12.34□□□□□ -0.43
TSPAN3-207ENST00000559494 PAM16Q9Y3D7 125 aa12.34□□□□□ -0.43
TSPAN3-207ENST00000559494 MIEN1Q9BRT3 115 aa12.33□□□□□ -0.44
TSPAN3-207ENST00000559494 SPATA45Q537H7 98 aa12.32□□□□□ -0.44
TSPAN3-207ENST00000559494 SCGB1D4Q6XE38 83 aa12.32□□□□□ -0.44
TSPAN3-207ENST00000559494 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
TSPAN3-207ENST00000559494 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
TSPAN3-207ENST00000559494 ZNF861PO60384 105 aa12.31□□□□□ -0.44
TSPAN3-207ENST00000559494 LINC00308Q8TCZ7 52 aa12.31□□□□□ -0.44
TSPAN3-207ENST00000559494 NDUFC2O95298 119 aa12.3□□□□□ -0.44
TSPAN3-207ENST00000559494 DIRC1Q969H9 104 aa12.3□□□□□ -0.44
TSPAN3-207ENST00000559494 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
TSPAN3-207ENST00000559494 J3QL48 77 aa12.29□□□□□ -0.44
TSPAN3-207ENST00000559494 COX8AP10176 69 aa12.29□□□□□ -0.44
TSPAN3-207ENST00000559494 REG3GQ6UW15 175 aa12.29□□□□□ -0.44
TSPAN3-207ENST00000559494 TRBV10-2A0A0K0K1G8 114 aa12.28□□□□□ -0.44
TSPAN3-207ENST00000559494 H0Y9J4 135 aa12.28□□□□□ -0.44
TSPAN3-207ENST00000559494 C14orf144Q96I85 54 aa12.27□□□□□ -0.45
TSPAN3-207ENST00000559494 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.45
TSPAN3-207ENST00000559494 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
TSPAN3-207ENST00000559494 SPANXCQ9NY87 97 aa12.27□□□□□ -0.45
TSPAN3-207ENST00000559494 HERC1Q15751 4861 aa12.26□□□□□ -0.45
TSPAN3-207ENST00000559494 TRBV10-3A0A0K0K1G6 114 aa12.26□□□□□ -0.45
TSPAN3-207ENST00000559494 KRTAP13-1Q8IUC0 172 aa12.26□□□□□ -0.45
TSPAN3-207ENST00000559494 LINC01600Q96MT4 127 aa12.26□□□□□ -0.45
TSPAN3-207ENST00000559494 TNXBP22105 4242 aa12.25□□□□□ -0.45
TSPAN3-207ENST00000559494 MT1HL1P0DM35 61 aa12.25□□□□□ -0.45
TSPAN3-207ENST00000559494 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
TSPAN3-207ENST00000559494 KCNQ1DNQ9H478 68 aa12.25□□□□□ -0.45
TSPAN3-207ENST00000559494 LOC105371267A0A1B0GV96 52 aa12.24□□□□□ -0.45
TSPAN3-207ENST00000559494 UBE2AP49459 152 aa12.24□□□□□ -0.45
TSPAN3-207ENST00000559494 DDTP30046 118 aa12.23□□□□□ -0.45
TSPAN3-207ENST00000559494 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
TSPAN3-207ENST00000559494 PRYO14603 147 aa12.22□□□□□ -0.45
TSPAN3-207ENST00000559494 DLEU1O43261 78 aa12.22□□□□□ -0.45
TSPAN3-207ENST00000559494 SPRR1AP35321 89 aa12.21□□□□□ -0.45
TSPAN3-207ENST00000559494 Q6ZVH6 145 aa12.21□□□□□ -0.45
TSPAN3-207ENST00000559494 IGLV6-57P01721 117 aa12.2□□□□□ -0.46
TSPAN3-207ENST00000559494 IFITM1P13164 125 aa12.2□□□□□ -0.46
TSPAN3-207ENST00000559494 PRLHP81277 87 aa12.2□□□□□ -0.46
TSPAN3-207ENST00000559494 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
TSPAN3-207ENST00000559494 KRTAP1-4P0C5Y4 121 aa12.19□□□□□ -0.46
TSPAN3-207ENST00000559494 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms