RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 M0QXV9 152 aa6.75□□□□□ -1.33
TPM1-217ENST00000559108 COX17Q14061 63 aa6.75□□□□□ -1.33
TPM1-217ENST00000559108 MEIG1Q5JSS6 88 aa6.75□□□□□ -1.33
TPM1-217ENST00000559108 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
TPM1-217ENST00000559108 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
TPM1-217ENST00000559108 VPREB1P12018 145 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 NMUP48645 174 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 LINC00158P58513 81 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 HERV-K104P63124 156 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 PRR3P79522 188 aaKnown RBP6.74□□□□□ -1.33
TPM1-217ENST00000559108 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
TPM1-217ENST00000559108 SCGB1D1O95968 90 aa6.73□□□□□ -1.33
TPM1-217ENST00000559108 RPL37AP61513 92 aaKnown RBP6.73□□□□□ -1.33
TPM1-217ENST00000559108 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
TPM1-217ENST00000559108 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
TPM1-217ENST00000559108 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
TPM1-217ENST00000559108 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
TPM1-217ENST00000559108 C7orf33Q8WU49 177 aa6.72□□□□□ -1.33
TPM1-217ENST00000559108 GAGE10A6NGK3 116 aa6.71□□□□□ -1.34
TPM1-217ENST00000559108 FAM229AH3BQW9 127 aa6.71□□□□□ -1.34
TPM1-217ENST00000559108 NPC2P61916 151 aa6.71□□□□□ -1.34
TPM1-217ENST00000559108 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
TPM1-217ENST00000559108 PSORS1C2Q9UIG4 136 aa6.71□□□□□ -1.34
TPM1-217ENST00000559108 FLG2Q5D862 2391 aaPredicted RBP6.71□□□□□ -1.34
TPM1-217ENST00000559108 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
TPM1-217ENST00000559108 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
TPM1-217ENST00000559108 RPL37AP8A6NKH3 93 aa6.69□□□□□ -1.34
TPM1-217ENST00000559108 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
TPM1-217ENST00000559108 MRPL55Q7Z7F7 128 aaKnown RBP6.69□□□□□ -1.34
TPM1-217ENST00000559108 ARL17AQ8IVW1 177 aa6.69□□□□□ -1.34
TPM1-217ENST00000559108 BOD1L2Q8IYS8 172 aa6.68□□□□□ -1.34
TPM1-217ENST00000559108 NCR3O14931 201 aa6.67□□□□□ -1.34
TPM1-217ENST00000559108 TIMM17BO60830 172 aa6.67□□□□□ -1.34
TPM1-217ENST00000559108 INAFM2P0DMQ5 153 aa6.67□□□□□ -1.34
TPM1-217ENST00000559108 PAM16Q9Y3D7 125 aa6.67□□□□□ -1.34
TPM1-217ENST00000559108 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
TPM1-217ENST00000559108 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
TPM1-217ENST00000559108 AKR1D1P51857 326 aa6.66□□□□□ -1.34
TPM1-217ENST00000559108 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.34
TPM1-217ENST00000559108 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
TPM1-217ENST00000559108 LINC00308Q8TCZ7 52 aa6.66□□□□□ -1.34
TPM1-217ENST00000559108 IGLV1-50A0A075B6I6 118 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 IGKV2-28A0A075B6P5 120 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 LINC00587B1AMM8 73 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 TMEM238C9JI98 176 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 IGKV2D-28P01615 120 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 UBE2BP63146 152 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
TPM1-217ENST00000559108 COX8AP10176 69 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 SPATA45Q537H7 98 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 SCGB1D4Q6XE38 83 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 C14orf144Q96I85 54 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 SPANXCQ9NY87 97 aa6.64□□□□□ -1.35
TPM1-217ENST00000559108 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 M0R378 163 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 RPL24P83731 157 aaKnown RBP6.63□□□□□ -1.35
TPM1-217ENST00000559108 LBHQ53QV2 105 aaPredicted RBP6.63□□□□□ -1.35
TPM1-217ENST00000559108 C2orf91Q6ZV80 131 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 VAMP8Q9BV40 100 aa6.63□□□□□ -1.35
TPM1-217ENST00000559108 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
TPM1-217ENST00000559108 LOC105371267A0A1B0GV96 52 aa6.62□□□□□ -1.35
TPM1-217ENST00000559108 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
TPM1-217ENST00000559108 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
TPM1-217ENST00000559108 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
TPM1-217ENST00000559108 KRTAP4-16G5E9R7 235 aaPredicted RBP6.6□□□□□ -1.35
TPM1-217ENST00000559108 DLEU1O43261 78 aa6.6□□□□□ -1.35
TPM1-217ENST00000559108 BCE1O60756 84 aa6.6□□□□□ -1.35
TPM1-217ENST00000559108 NDUFC2O95298 119 aa6.6□□□□□ -1.35
TPM1-217ENST00000559108 PRLHP81277 87 aa6.6□□□□□ -1.35
TPM1-217ENST00000559108 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
TPM1-217ENST00000559108 TRBV10-2A0A0K0K1G8 114 aa6.59□□□□□ -1.35
TPM1-217ENST00000559108 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
TPM1-217ENST00000559108 MIEN1Q9BRT3 115 aa6.59□□□□□ -1.35
TPM1-217ENST00000559108 SPANXB1Q9NS25 103 aaPredicted RBP6.59□□□□□ -1.35
TPM1-217ENST00000559108 SPRR1AP35321 89 aa6.58□□□□□ -1.36
TPM1-217ENST00000559108 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
TPM1-217ENST00000559108 MT1HL1P0DM35 61 aa6.57□□□□□ -1.36
TPM1-217ENST00000559108 DDTP30046 118 aa6.57□□□□□ -1.36
TPM1-217ENST00000559108 SPINK6Q6UWN8 80 aa6.57□□□□□ -1.36
TPM1-217ENST00000559108 KCNQ1DNQ9H478 68 aa6.57□□□□□ -1.36
TPM1-217ENST00000559108 PRYO14603 147 aa6.56□□□□□ -1.36
TPM1-217ENST00000559108 ZNF861PO60384 105 aa6.56□□□□□ -1.36
TPM1-217ENST00000559108 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
TPM1-217ENST00000559108 IFITM1P13164 125 aa6.56□□□□□ -1.36
TPM1-217ENST00000559108 PPDPFQ9H3Y8 114 aa6.56□□□□□ -1.36
TPM1-217ENST00000559108 A4D1N5 150 aa6.55□□□□□ -1.36
TPM1-217ENST00000559108 H0Y9J4 135 aa6.55□□□□□ -1.36
TPM1-217ENST00000559108 SLC25A34Q6PIV7 304 aa6.55□□□□□ -1.36
TPM1-217ENST00000559108 Q6ZVH6 145 aa6.55□□□□□ -1.36
TPM1-217ENST00000559108 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
TPM1-217ENST00000559108 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
TPM1-217ENST00000559108 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
TPM1-217ENST00000559108 C12orf57Q99622 126 aa6.53□□□□□ -1.36
TPM1-217ENST00000559108 TNXBP22105 4242 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms