RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 FAM19A5Q7Z5A7 132 aaPredicted RBP9.63□□□□□ -0.87
LINC01220-201ENST00000558575 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
LINC01220-201ENST00000558575 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
LINC01220-201ENST00000558575 RPL37AP61513 92 aaKnown RBP9.62□□□□□ -0.87
LINC01220-201ENST00000558575 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
LINC01220-201ENST00000558575 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
LINC01220-201ENST00000558575 MYMXA0A1B0GTQ4 84 aa9.61□□□□□ -0.87
LINC01220-201ENST00000558575 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
LINC01220-201ENST00000558575 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
LINC01220-201ENST00000558575 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
LINC01220-201ENST00000558575 HERV-K104P63124 156 aa9.6□□□□□ -0.87
LINC01220-201ENST00000558575 ATOH7Q8N100 152 aa9.6□□□□□ -0.87
LINC01220-201ENST00000558575 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
LINC01220-201ENST00000558575 C20orf202A1L168 122 aa9.59□□□□□ -0.87
LINC01220-201ENST00000558575 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
LINC01220-201ENST00000558575 LINC00158P58513 81 aa9.59□□□□□ -0.87
LINC01220-201ENST00000558575 Q8NDZ9 215 aa9.59□□□□□ -0.87
LINC01220-201ENST00000558575 C22orf24Q9Y442 160 aa9.59□□□□□ -0.87
LINC01220-201ENST00000558575 M0QXV9 152 aa9.58□□□□□ -0.88
LINC01220-201ENST00000558575 ANKRD39Q53RE8 183 aa9.58□□□□□ -0.88
LINC01220-201ENST00000558575 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
LINC01220-201ENST00000558575 NMUP48645 174 aa9.57□□□□□ -0.88
LINC01220-201ENST00000558575 IGLV5-37A0A075B6J1 123 aa9.56□□□□□ -0.88
LINC01220-201ENST00000558575 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
LINC01220-201ENST00000558575 MEIG1Q5JSS6 88 aa9.56□□□□□ -0.88
LINC01220-201ENST00000558575 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
LINC01220-201ENST00000558575 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
LINC01220-201ENST00000558575 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
LINC01220-201ENST00000558575 VPREB1P12018 145 aa9.55□□□□□ -0.88
LINC01220-201ENST00000558575 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
LINC01220-201ENST00000558575 TP73-AS1Q9UF72 201 aa9.54□□□□□ -0.88
LINC01220-201ENST00000558575 LINC00587B1AMM8 73 aa9.53□□□□□ -0.88
LINC01220-201ENST00000558575 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
LINC01220-201ENST00000558575 DAND5Q8N907 189 aa9.53□□□□□ -0.88
LINC01220-201ENST00000558575 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
LINC01220-201ENST00000558575 KRTAP9-6A0A140TA67 174 aa9.52□□□□□ -0.89
LINC01220-201ENST00000558575 AKR1D1P51857 326 aa9.52□□□□□ -0.89
LINC01220-201ENST00000558575 LITAFQ99732 161 aa9.52□□□□□ -0.89
LINC01220-201ENST00000558575 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
LINC01220-201ENST00000558575 SRSF9Q13242 221 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC01220-201ENST00000558575 LBHQ53QV2 105 aaPredicted RBP9.51□□□□□ -0.89
LINC01220-201ENST00000558575 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
LINC01220-201ENST00000558575 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 ZNF815PA8K554 130 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
LINC01220-201ENST00000558575 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
LINC01220-201ENST00000558575 UBE2BP63146 152 aa9.49□□□□□ -0.89
LINC01220-201ENST00000558575 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
LINC01220-201ENST00000558575 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
LINC01220-201ENST00000558575 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
LINC01220-201ENST00000558575 BOD1L2Q8IYS8 172 aa9.48□□□□□ -0.89
LINC01220-201ENST00000558575 NKAPP1Q8N9T2 125 aa9.48□□□□□ -0.89
LINC01220-201ENST00000558575 TIMM17BO60830 172 aa9.46□□□□□ -0.9
LINC01220-201ENST00000558575 IGLV7-43P04211 117 aa9.46□□□□□ -0.9
LINC01220-201ENST00000558575 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
LINC01220-201ENST00000558575 M0R378 163 aa9.44□□□□□ -0.9
LINC01220-201ENST00000558575 NPC2P61916 151 aa9.44□□□□□ -0.9
LINC01220-201ENST00000558575 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
LINC01220-201ENST00000558575 IGKV2-28A0A075B6P5 120 aa9.43□□□□□ -0.9
LINC01220-201ENST00000558575 IGKV2D-28P01615 120 aa9.43□□□□□ -0.9
LINC01220-201ENST00000558575 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
LINC01220-201ENST00000558575 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
LINC01220-201ENST00000558575 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
LINC01220-201ENST00000558575 NCR3O14931 201 aa9.42□□□□□ -0.9
LINC01220-201ENST00000558575 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
LINC01220-201ENST00000558575 NDUFC2O95298 119 aa9.4□□□□□ -0.9
LINC01220-201ENST00000558575 SCGB1D4Q6XE38 83 aa9.4□□□□□ -0.9
LINC01220-201ENST00000558575 BCE1O60756 84 aa9.39□□□□□ -0.91
LINC01220-201ENST00000558575 PYY3Q5JQD4 70 aa9.39□□□□□ -0.91
LINC01220-201ENST00000558575 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
LINC01220-201ENST00000558575 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
LINC01220-201ENST00000558575 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 TRBV10-2A0A0K0K1G8 114 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 KRTAP13-1Q8IUC0 172 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 TMEM126AQ9H061 195 aa9.38□□□□□ -0.91
LINC01220-201ENST00000558575 ZNF861PO60384 105 aa9.37□□□□□ -0.91
LINC01220-201ENST00000558575 LPAP08519 4548 aa9.36□□□□□ -0.91
LINC01220-201ENST00000558575 COX8AP10176 69 aa9.36□□□□□ -0.91
LINC01220-201ENST00000558575 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
LINC01220-201ENST00000558575 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
LINC01220-201ENST00000558575 MUSTN1Q8IVN3 82 aa9.35□□□□□ -0.91
LINC01220-201ENST00000558575 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
LINC01220-201ENST00000558575 PAM16Q9Y3D7 125 aa9.35□□□□□ -0.91
LINC01220-201ENST00000558575 H0Y9J4 135 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 SPRR1AP35321 89 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 SPATA45Q537H7 98 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 C14orf144Q96I85 54 aa9.34□□□□□ -0.91
LINC01220-201ENST00000558575 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
LINC01220-201ENST00000558575 DLEU1O43261 78 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 IFITM1P13164 125 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 DDTP30046 118 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 Q6ZVH6 145 aa9.33□□□□□ -0.92
LINC01220-201ENST00000558575 VAMP8Q9BV40 100 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms