RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PLA2G2DQ9UNK4 145 aa15.9■□□□□ 0.14
SMAD6-202ENST00000557916 C22orf24Q9Y442 160 aa15.9■□□□□ 0.14
SMAD6-202ENST00000557916 INAFM2P0DMQ5 153 aa15.89■□□□□ 0.13
SMAD6-202ENST00000557916 IGKV2D-26A0A0A0MRZ7 120 aa15.88■□□□□ 0.13
SMAD6-202ENST00000557916 PRR3P79522 188 aaKnown RBP15.86■□□□□ 0.13
SMAD6-202ENST00000557916 MIR7-3HGQ8N6C7 128 aa15.86■□□□□ 0.13
SMAD6-202ENST00000557916 ANKRD39Q53RE8 183 aa15.85■□□□□ 0.13
SMAD6-202ENST00000557916 UBE2BP63146 152 aa15.85■□□□□ 0.13
SMAD6-202ENST00000557916 LBHQ53QV2 105 aaPredicted RBP15.85■□□□□ 0.13
SMAD6-202ENST00000557916 TP73-AS1Q9UF72 201 aa15.85■□□□□ 0.13
SMAD6-202ENST00000557916 A0A0J9YXY3 114 aa15.84■□□□□ 0.13
SMAD6-202ENST00000557916 TMA7Q9Y2S6 64 aaKnown RBP15.84■□□□□ 0.13
SMAD6-202ENST00000557916 IGLV5-37A0A075B6J1 123 aa15.83■□□□□ 0.12
SMAD6-202ENST00000557916 SCGB1D1O95968 90 aa15.83■□□□□ 0.12
SMAD6-202ENST00000557916 MRPL55Q7Z7F7 128 aaKnown RBP15.83■□□□□ 0.12
SMAD6-202ENST00000557916 NKAPP1Q8N9T2 125 aa15.83■□□□□ 0.12
SMAD6-202ENST00000557916 PSORS1C2Q9UIG4 136 aa15.83■□□□□ 0.12
SMAD6-202ENST00000557916 ZNF815PA8K554 130 aa15.82■□□□□ 0.12
SMAD6-202ENST00000557916 KRTAP11-1Q8IUC1 163 aa15.82■□□□□ 0.12
SMAD6-202ENST00000557916 TTTY13Q9BZ97 58 aa15.82■□□□□ 0.12
SMAD6-202ENST00000557916 RPL24P83731 157 aaKnown RBP15.81■□□□□ 0.12
SMAD6-202ENST00000557916 VPREB1P12018 145 aa15.8■□□□□ 0.12
SMAD6-202ENST00000557916 DAND5Q8N907 189 aa15.8■□□□□ 0.12
SMAD6-202ENST00000557916 HNRNPA3P51991 378 aaKnown RBP15.79■□□□□ 0.12
SMAD6-202ENST00000557916 Q8NDZ9 215 aa15.78■□□□□ 0.12
SMAD6-202ENST00000557916 C1orf137Q5JT78 98 aa15.77■□□□□ 0.12
SMAD6-202ENST00000557916 LINC00167Q96N53 147 aa15.77■□□□□ 0.12
SMAD6-202ENST00000557916 GAGE10A6NGK3 116 aa15.77■□□□□ 0.11
SMAD6-202ENST00000557916 HSBP1L1C9JCN9 74 aa15.77■□□□□ 0.11
SMAD6-202ENST00000557916 BOD1L2Q8IYS8 172 aa15.77■□□□□ 0.11
SMAD6-202ENST00000557916 ADAMTSL4-AS1Q5T5F5 129 aa15.75■□□□□ 0.11
SMAD6-202ENST00000557916 RPL37AP8A6NKH3 93 aa15.74■□□□□ 0.11
SMAD6-202ENST00000557916 LOC107984156A0A0G2JMH3 177 aa15.73■□□□□ 0.11
SMAD6-202ENST00000557916 PCP2Q8IVA1 136 aa15.73■□□□□ 0.11
SMAD6-202ENST00000557916 ARL17AQ8IVW1 177 aa15.73■□□□□ 0.11
SMAD6-202ENST00000557916 TIMM17BO60830 172 aa15.72■□□□□ 0.11
SMAD6-202ENST00000557916 LITAFQ99732 161 aa15.72■□□□□ 0.11
SMAD6-202ENST00000557916 FLG2Q5D862 2391 aaPredicted RBP15.71■□□□□ 0.11
SMAD6-202ENST00000557916 MIEN1Q9BRT3 115 aa15.71■□□□□ 0.11
SMAD6-202ENST00000557916 PKHD1L1Q86WI1 4243 aa15.71■□□□□ 0.11
SMAD6-202ENST00000557916 SCGB1D4Q6XE38 83 aa15.7■□□□□ 0.1
SMAD6-202ENST00000557916 NPC2P61916 151 aa15.68■□□□□ 0.1
SMAD6-202ENST00000557916 IGKV2-28A0A075B6P5 120 aa15.68■□□□□ 0.1
SMAD6-202ENST00000557916 M0R378 163 aa15.68■□□□□ 0.1
SMAD6-202ENST00000557916 IGKV2D-28P01615 120 aa15.68■□□□□ 0.1
SMAD6-202ENST00000557916 IGLV7-43P04211 117 aa15.67■□□□□ 0.1
SMAD6-202ENST00000557916 JOSD1Q15040 202 aaPredicted RBP15.67■□□□□ 0.1
SMAD6-202ENST00000557916 MYCBP2O75592 4640 aa15.67■□□□□ 0.1
SMAD6-202ENST00000557916 IGLV1-50A0A075B6I6 118 aa15.66■□□□□ 0.1
SMAD6-202ENST00000557916 SRSF9Q13242 221 aaKnown RBP eCLIP15.66■□□□□ 0.1
SMAD6-202ENST00000557916 SOSTDC1Q6X4U4 206 aa15.66■□□□□ 0.1
SMAD6-202ENST00000557916 NCR3O14931 201 aa15.65■□□□□ 0.1
SMAD6-202ENST00000557916 SPINK6Q6UWN8 80 aa15.65■□□□□ 0.1
SMAD6-202ENST00000557916 EIF4EBP3O60516 100 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-202ENST00000557916 LINC00308Q8TCZ7 52 aa15.64■□□□□ 0.09
SMAD6-202ENST00000557916 TMEM238C9JI98 176 aa15.63■□□□□ 0.09
SMAD6-202ENST00000557916 NDUFC2O95298 119 aa15.61■□□□□ 0.09
SMAD6-202ENST00000557916 BCE1O60756 84 aa15.6■□□□□ 0.09
SMAD6-202ENST00000557916 SPANXDQ9BXN6 97 aa15.6■□□□□ 0.09
SMAD6-202ENST00000557916 SPANXB1Q9NS25 103 aaPredicted RBP15.6■□□□□ 0.09
SMAD6-202ENST00000557916 SPANXCQ9NY87 97 aa15.6■□□□□ 0.09
SMAD6-202ENST00000557916 TRBV10-2A0A0K0K1G8 114 aa15.59■□□□□ 0.09
SMAD6-202ENST00000557916 REG3GQ6UW15 175 aa15.57■□□□□ 0.08
SMAD6-202ENST00000557916 TMEM126AQ9H061 195 aa15.57■□□□□ 0.08
SMAD6-202ENST00000557916 PAM16Q9Y3D7 125 aa15.57■□□□□ 0.08
SMAD6-202ENST00000557916 VAMP8Q9BV40 100 aa15.56■□□□□ 0.08
SMAD6-202ENST00000557916 TRBV10-3A0A0K0K1G6 114 aa15.55■□□□□ 0.08
SMAD6-202ENST00000557916 ZNF861PO60384 105 aa15.55■□□□□ 0.08
SMAD6-202ENST00000557916 SPATA45Q537H7 98 aa15.55■□□□□ 0.08
SMAD6-202ENST00000557916 Q6ZVH6 145 aa15.55■□□□□ 0.08
SMAD6-202ENST00000557916 LRP1Q07954 4544 aaKnown RBP15.55■□□□□ 0.08
SMAD6-202ENST00000557916 COX8AP10176 69 aa15.54■□□□□ 0.08
SMAD6-202ENST00000557916 PYY3Q5JQD4 70 aa15.54■□□□□ 0.08
SMAD6-202ENST00000557916 DIRC1Q969H9 104 aa15.54■□□□□ 0.08
SMAD6-202ENST00000557916 FAT3Q8TDW7 4589 aa15.53■□□□□ 0.08
SMAD6-202ENST00000557916 IFITM1P13164 125 aa15.53■□□□□ 0.08
SMAD6-202ENST00000557916 KRTAP29-1A8MX34 341 aaPredicted RBP15.52■□□□□ 0.08
SMAD6-202ENST00000557916 OXTP01178 125 aa15.52■□□□□ 0.08
SMAD6-202ENST00000557916 DDTP30046 118 aa15.52■□□□□ 0.08
SMAD6-202ENST00000557916 COPS9Q8WXC6 57 aa15.52■□□□□ 0.08
SMAD6-202ENST00000557916 RPL28P46779 137 aaKnown RBP15.51■□□□□ 0.07
SMAD6-202ENST00000557916 S100A7L2Q5SY68 101 aa15.51■□□□□ 0.07
SMAD6-202ENST00000557916 H0Y9J4 135 aa15.51■□□□□ 0.07
SMAD6-202ENST00000557916 PRYO14603 147 aa15.51■□□□□ 0.07
SMAD6-202ENST00000557916 UBE2AP49459 152 aa15.51■□□□□ 0.07
SMAD6-202ENST00000557916 KCNQ1DNQ9H478 68 aa15.51■□□□□ 0.07
SMAD6-202ENST00000557916 MUSTN1Q8IVN3 82 aa15.5■□□□□ 0.07
SMAD6-202ENST00000557916 S100A12P80511 92 aa15.49■□□□□ 0.07
SMAD6-202ENST00000557916 FAM19A1Q7Z5A9 133 aa15.49■□□□□ 0.07
SMAD6-202ENST00000557916 C14orf144Q96I85 54 aa15.49■□□□□ 0.07
SMAD6-202ENST00000557916 PPDPFQ9H3Y8 114 aa15.49■□□□□ 0.07
SMAD6-202ENST00000557916 DLEU1O43261 78 aa15.48■□□□□ 0.07
SMAD6-202ENST00000557916 IGLV6-57P01721 117 aa15.47■□□□□ 0.07
SMAD6-202ENST00000557916 KRTAP13-1Q8IUC0 172 aa15.47■□□□□ 0.07
SMAD6-202ENST00000557916 J3QL48 77 aa15.46■□□□□ 0.07
SMAD6-202ENST00000557916 PRLHP81277 87 aa15.46■□□□□ 0.07
SMAD6-202ENST00000557916 LINC00518Q8N0U6 118 aa15.45■□□□□ 0.06
SMAD6-202ENST00000557916 SPRR1AP35321 89 aa15.43■□□□□ 0.06
SMAD6-202ENST00000557916 OR13C6PQ8NH95 151 aa15.43■□□□□ 0.06
SMAD6-202ENST00000557916 SLC25A34Q6PIV7 304 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms