RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 NOTCH1P46531 2555 aa6.73□□□□□ -1.33
TMEM260-211ENST00000556648 GVQW2A0A096LPI5 108 aaPredicted RBP6.72□□□□□ -1.33
TMEM260-211ENST00000556648 TRAV10A0A0B4J240 114 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 H0YGX0 51 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 LINC00588Q9Y4M8 146 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 COL6A5A8TX70 2615 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 Q6ZRU5 148 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 C15orf53Q8NAA6 179 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
TMEM260-211ENST00000556648 DNAL4O96015 105 aa6.71□□□□□ -1.33
TMEM260-211ENST00000556648 RPL18AQ02543 176 aaKnown RBP6.71□□□□□ -1.33
TMEM260-211ENST00000556648 C1orf43Q9BWL3 253 aa6.71□□□□□ -1.33
TMEM260-211ENST00000556648 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
TMEM260-211ENST00000556648 TMEM126AQ9H061 195 aa6.71□□□□□ -1.34
TMEM260-211ENST00000556648 HUWE1Q7Z6Z7 4374 aaKnown RBP6.7□□□□□ -1.34
TMEM260-211ENST00000556648 DNAH10OSP0CZ25 163 aa6.7□□□□□ -1.34
TMEM260-211ENST00000556648 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
TMEM260-211ENST00000556648 S100A7L2Q5SY68 101 aa6.7□□□□□ -1.34
TMEM260-211ENST00000556648 A0A1B0GV72 72 aa6.69□□□□□ -1.34
TMEM260-211ENST00000556648 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
TMEM260-211ENST00000556648 CASC10Q5T4H9 136 aa6.69□□□□□ -1.34
TMEM260-211ENST00000556648 MDFIQ99750 246 aa6.69□□□□□ -1.34
TMEM260-211ENST00000556648 TTC32Q5I0X7 151 aa6.69□□□□□ -1.34
TMEM260-211ENST00000556648 IGLV6-57P01721 117 aa6.68□□□□□ -1.34
TMEM260-211ENST00000556648 MUC7Q8TAX7 377 aa6.68□□□□□ -1.34
TMEM260-211ENST00000556648 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
TMEM260-211ENST00000556648 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
TMEM260-211ENST00000556648 FAM240AA0A1B0GVK7 77 aa6.67□□□□□ -1.34
TMEM260-211ENST00000556648 Q8N814 137 aa6.67□□□□□ -1.34
TMEM260-211ENST00000556648 VPREB1P12018 145 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 GAGE2EQ4V326 116 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 SMCR5Q8TEV8 140 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 C14orf132Q9NPU4 83 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 GAGE2DQ9UEU5 116 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 NBEAL1Q6ZS30 2694 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 Q6ZRP5 223 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
TMEM260-211ENST00000556648 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.35
TMEM260-211ENST00000556648 SNCGO76070 127 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 GAGE2AQ6NT46 116 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 LINC00575Q6W349 94 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 NDUFC2-KCTD14E9PQ53 114 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 SYCNQ0VAF6 134 aa6.64□□□□□ -1.35
TMEM260-211ENST00000556648 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
TMEM260-211ENST00000556648 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
TMEM260-211ENST00000556648 A0A1B0GX51 115 aa6.62□□□□□ -1.35
TMEM260-211ENST00000556648 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
TMEM260-211ENST00000556648 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
TMEM260-211ENST00000556648 hADV29S1A0JD25 119 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 DIRC1Q969H9 104 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 M0R378 163 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 ZNF73O43830 326 aaPredicted RBP6.6□□□□□ -1.35
TMEM260-211ENST00000556648 ACYP1P07311 99 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 MGAM2Q2M2H8 2515 aa6.6□□□□□ -1.35
TMEM260-211ENST00000556648 F8WDY8 70 aa6.59□□□□□ -1.36
TMEM260-211ENST00000556648 COX7BP24311 80 aa6.59□□□□□ -1.36
TMEM260-211ENST00000556648 SDIM1Q6ZPB5 146 aa6.59□□□□□ -1.36
TMEM260-211ENST00000556648 COL7A1Q02388 2944 aa6.58□□□□□ -1.36
TMEM260-211ENST00000556648 FAM168BA1KXE4 195 aa6.58□□□□□ -1.36
TMEM260-211ENST00000556648 Q6ZQY7 126 aa6.58□□□□□ -1.36
TMEM260-211ENST00000556648 TMEM256-PLSCR3K7ERE1 68 aa6.57□□□□□ -1.36
TMEM260-211ENST00000556648 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
TMEM260-211ENST00000556648 Q6Q795 121 aa6.57□□□□□ -1.36
TMEM260-211ENST00000556648 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
TMEM260-211ENST00000556648 TRBV7-7A0A0K0K1E9 115 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 RMI2Q96E14 147 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 B9D2Q9BPU9 175 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 APLNQ9ULZ1 77 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 DNAH9Q9NYC9 4486 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 LYSTQ99698 3801 aa6.56□□□□□ -1.36
TMEM260-211ENST00000556648 LINC00643Q86TS7 51 aa6.55□□□□□ -1.36
TMEM260-211ENST00000556648 KRTAP7-1Q8IUC3 87 aa6.55□□□□□ -1.36
TMEM260-211ENST00000556648 CCKP06307 115 aa6.55□□□□□ -1.36
TMEM260-211ENST00000556648 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
TMEM260-211ENST00000556648 NHLRC4P0CG21 123 aaPredicted RBP6.55□□□□□ -1.36
TMEM260-211ENST00000556648 NDUFV3P56181 108 aaKnown RBP6.55□□□□□ -1.36
TMEM260-211ENST00000556648 J3QL48 77 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 LINC00528Q8N1L1 170 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 NKAPP1Q8N9T2 125 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
TMEM260-211ENST00000556648 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
TMEM260-211ENST00000556648 M0R2N4 97 aa6.53□□□□□ -1.36
TMEM260-211ENST00000556648 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
TMEM260-211ENST00000556648 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
TMEM260-211ENST00000556648 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
TMEM260-211ENST00000556648 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.52□□□□□ -1.37
TMEM260-211ENST00000556648 FAM19A5Q7Z5A7 132 aaPredicted RBP6.52□□□□□ -1.37
TMEM260-211ENST00000556648 STAB2Q8WWQ8 2551 aa6.52□□□□□ -1.37
TMEM260-211ENST00000556648 Q6ZQT0 140 aa6.51□□□□□ -1.37
TMEM260-211ENST00000556648 KCNQ1DNQ9H478 68 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms