RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 C22orf24Q9Y442 160 aa12.56□□□□□ -0.4
RCCD1-205ENST00000556333 FAT1Q14517 4588 aa12.55□□□□□ -0.4
RCCD1-205ENST00000556333 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
RCCD1-205ENST00000556333 ATOH7Q8N100 152 aa12.55□□□□□ -0.4
RCCD1-205ENST00000556333 NKAPP1Q8N9T2 125 aa12.54□□□□□ -0.4
RCCD1-205ENST00000556333 C5orf52A6NGY3 159 aa12.53□□□□□ -0.4
RCCD1-205ENST00000556333 AKR1D1P51857 326 aa12.53□□□□□ -0.4
RCCD1-205ENST00000556333 PLA2G2DQ9UNK4 145 aa12.53□□□□□ -0.4
RCCD1-205ENST00000556333 LBHQ53QV2 105 aaPredicted RBP12.52□□□□□ -0.41
RCCD1-205ENST00000556333 MRPL55Q7Z7F7 128 aaKnown RBP12.52□□□□□ -0.41
RCCD1-205ENST00000556333 MIR7-3HGQ8N6C7 128 aa12.52□□□□□ -0.41
RCCD1-205ENST00000556333 PSORS1C2Q9UIG4 136 aa12.52□□□□□ -0.41
RCCD1-205ENST00000556333 HNRNPA3P51991 378 aaKnown RBP12.51□□□□□ -0.41
RCCD1-205ENST00000556333 C1orf137Q5JT78 98 aa12.51□□□□□ -0.41
RCCD1-205ENST00000556333 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
RCCD1-205ENST00000556333 TP73-AS1Q9UF72 201 aa12.5□□□□□ -0.41
RCCD1-205ENST00000556333 MYCBP2O75592 4640 aa12.49□□□□□ -0.41
RCCD1-205ENST00000556333 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
RCCD1-205ENST00000556333 GAGE10A6NGK3 116 aa12.48□□□□□ -0.41
RCCD1-205ENST00000556333 KRTAP11-1Q8IUC1 163 aa12.48□□□□□ -0.41
RCCD1-205ENST00000556333 DAND5Q8N907 189 aa12.48□□□□□ -0.41
RCCD1-205ENST00000556333 IGLV5-37A0A075B6J1 123 aa12.47□□□□□ -0.41
RCCD1-205ENST00000556333 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
RCCD1-205ENST00000556333 LINC00167Q96N53 147 aa12.47□□□□□ -0.41
RCCD1-205ENST00000556333 A0A0J9YXY3 114 aa12.46□□□□□ -0.41
RCCD1-205ENST00000556333 RPL37AP8A6NKH3 93 aa12.46□□□□□ -0.41
RCCD1-205ENST00000556333 VPREB1P12018 145 aa12.46□□□□□ -0.41
RCCD1-205ENST00000556333 ANKRD39Q53RE8 183 aa12.46□□□□□ -0.41
RCCD1-205ENST00000556333 TTTY13Q9BZ97 58 aa12.46□□□□□ -0.41
RCCD1-205ENST00000556333 SCGB1D1O95968 90 aa12.45□□□□□ -0.42
RCCD1-205ENST00000556333 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
RCCD1-205ENST00000556333 MIEN1Q9BRT3 115 aa12.44□□□□□ -0.42
RCCD1-205ENST00000556333 FLG2Q5D862 2391 aaPredicted RBP12.44□□□□□ -0.42
RCCD1-205ENST00000556333 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
RCCD1-205ENST00000556333 TMA7Q9Y2S6 64 aaKnown RBP12.43□□□□□ -0.42
RCCD1-205ENST00000556333 Q8NDZ9 215 aa12.42□□□□□ -0.42
RCCD1-205ENST00000556333 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
RCCD1-205ENST00000556333 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
RCCD1-205ENST00000556333 IGLV7-43P04211 117 aa12.41□□□□□ -0.42
RCCD1-205ENST00000556333 NPC2P61916 151 aa12.41□□□□□ -0.42
RCCD1-205ENST00000556333 SPINK6Q6UWN8 80 aa12.4□□□□□ -0.42
RCCD1-205ENST00000556333 SCGB1D4Q6XE38 83 aa12.4□□□□□ -0.42
RCCD1-205ENST00000556333 NCR3O14931 201 aa12.39□□□□□ -0.43
RCCD1-205ENST00000556333 ADAMTSL4-AS1Q5T5F5 129 aa12.39□□□□□ -0.43
RCCD1-205ENST00000556333 M0R378 163 aa12.37□□□□□ -0.43
RCCD1-205ENST00000556333 SRSF9Q13242 221 aaKnown RBP eCLIP12.37□□□□□ -0.43
RCCD1-205ENST00000556333 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
RCCD1-205ENST00000556333 TIMM17BO60830 172 aa12.36□□□□□ -0.43
RCCD1-205ENST00000556333 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
RCCD1-205ENST00000556333 PKHD1L1Q86WI1 4243 aa12.35□□□□□ -0.43
RCCD1-205ENST00000556333 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
RCCD1-205ENST00000556333 J3QL48 77 aa12.35□□□□□ -0.43
RCCD1-205ENST00000556333 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
RCCD1-205ENST00000556333 LITAFQ99732 161 aa12.34□□□□□ -0.43
RCCD1-205ENST00000556333 TMEM238C9JI98 176 aa12.33□□□□□ -0.44
RCCD1-205ENST00000556333 BCE1O60756 84 aa12.33□□□□□ -0.44
RCCD1-205ENST00000556333 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
RCCD1-205ENST00000556333 OXTP01178 125 aa12.32□□□□□ -0.44
RCCD1-205ENST00000556333 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
RCCD1-205ENST00000556333 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
RCCD1-205ENST00000556333 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
RCCD1-205ENST00000556333 LINC00308Q8TCZ7 52 aa12.31□□□□□ -0.44
RCCD1-205ENST00000556333 DIRC1Q969H9 104 aa12.31□□□□□ -0.44
RCCD1-205ENST00000556333 NDUFC2O95298 119 aa12.3□□□□□ -0.44
RCCD1-205ENST00000556333 UBE2AP49459 152 aa12.3□□□□□ -0.44
RCCD1-205ENST00000556333 TMEM126AQ9H061 195 aa12.3□□□□□ -0.44
RCCD1-205ENST00000556333 SPANXB1Q9NS25 103 aaPredicted RBP12.3□□□□□ -0.44
RCCD1-205ENST00000556333 ZNF861PO60384 105 aa12.29□□□□□ -0.44
RCCD1-205ENST00000556333 EIF4EBP3O60516 100 aaPredicted RBP12.29□□□□□ -0.44
RCCD1-205ENST00000556333 RPL28P46779 137 aaKnown RBP12.29□□□□□ -0.44
RCCD1-205ENST00000556333 S100A12P80511 92 aa12.28□□□□□ -0.44
RCCD1-205ENST00000556333 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
RCCD1-205ENST00000556333 FAM19A1Q7Z5A9 133 aa12.28□□□□□ -0.44
RCCD1-205ENST00000556333 SPANXDQ9BXN6 97 aa12.28□□□□□ -0.44
RCCD1-205ENST00000556333 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
RCCD1-205ENST00000556333 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.45
RCCD1-205ENST00000556333 H0Y9J4 135 aa12.27□□□□□ -0.45
RCCD1-205ENST00000556333 JOSD1Q15040 202 aaPredicted RBP12.27□□□□□ -0.45
RCCD1-205ENST00000556333 TRBV10-3A0A0K0K1G6 114 aa12.26□□□□□ -0.45
RCCD1-205ENST00000556333 DDTP30046 118 aa12.26□□□□□ -0.45
RCCD1-205ENST00000556333 PRYO14603 147 aa12.25□□□□□ -0.45
RCCD1-205ENST00000556333 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
RCCD1-205ENST00000556333 PRLHP81277 87 aa12.24□□□□□ -0.45
RCCD1-205ENST00000556333 VAMP8Q9BV40 100 aa12.24□□□□□ -0.45
RCCD1-205ENST00000556333 PAM16Q9Y3D7 125 aa12.24□□□□□ -0.45
RCCD1-205ENST00000556333 IFITM1P13164 125 aa12.22□□□□□ -0.45
RCCD1-205ENST00000556333 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
RCCD1-205ENST00000556333 Q6ZVH6 145 aa12.22□□□□□ -0.45
RCCD1-205ENST00000556333 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
RCCD1-205ENST00000556333 KCNQ1DNQ9H478 68 aa12.22□□□□□ -0.45
RCCD1-205ENST00000556333 MUSTN1Q8IVN3 82 aa12.21□□□□□ -0.45
RCCD1-205ENST00000556333 COX8AP10176 69 aa12.2□□□□□ -0.46
RCCD1-205ENST00000556333 LINC01600Q96MT4 127 aa12.2□□□□□ -0.46
RCCD1-205ENST00000556333 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
RCCD1-205ENST00000556333 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
RCCD1-205ENST00000556333 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
RCCD1-205ENST00000556333 C14orf144Q96I85 54 aa12.18□□□□□ -0.46
RCCD1-205ENST00000556333 IGLV6-57P01721 117 aa12.17□□□□□ -0.46
RCCD1-205ENST00000556333 PYY3Q5JQD4 70 aa12.17□□□□□ -0.46
RCCD1-205ENST00000556333 TRAV23DV6A0A075B6W5 121 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms