RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 RPL39LQ96EH5 51 aaKnown RBP1.64□□□□□ -2.15
GPHN-212ENST00000556240 CARD19Q96LW7 228 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 C20orf78Q9BR46 151 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 C8orf17Q9NRJ1 99 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 CDC42SE2Q9NRR3 84 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 PLAC8Q9NZF1 115 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 V9GYV3 84 aa1.64□□□□□ -2.15
GPHN-212ENST00000556240 DMBT1Q9UGM3 2413 aaPredicted RBP1.64□□□□□ -2.15
GPHN-212ENST00000556240 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 TRAV26-2A0A0B4J265 109 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 LOC107984640A0A0U1RRK4 108 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 COX7A2LO14548 114 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 CKS2P33552 79 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 IFI27P40305 119 aaPredicted RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 RPL23P62829 140 aaKnown RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 SEC11AP67812 179 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 HAMPP81172 84 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 MRPS36P82909 103 aaKnown RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 ADIRFQ15847 76 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 RNASE13Q5GAN3 156 aaKnown RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 FAM104BQ5XKR9 115 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 MRPL55Q7Z7F7 128 aaKnown RBP1.63□□□□□ -2.15
GPHN-212ENST00000556240 AMN1Q8IY45 258 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 ZNF664Q8N3J9 261 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 NUP35Q8NFH5 326 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 SMIM2Q9BVW6 85 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 SPANXA1Q9NS26 97 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 TMEM242Q9NWH2 141 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 UBE2D4Q9Y2X8 147 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 MYCBP2O75592 4640 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 FAT3Q8TDW7 4589 aa1.63□□□□□ -2.15
GPHN-212ENST00000556240 FAT1Q14517 4588 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 TRAV9-1A0A075B6T8 112 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 TGIF2-C20orf24A0A0A6YYL0 155 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 IGKV3OR2-268A0A0C4DH90 116 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 A0A1B0GXF2 115 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 NDUFA1O15239 70 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 MT-ND4LP03901 98 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 RAB5AP20339 215 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 XCL1P47992 114 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 RAB14P61106 215 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 CTAG1AP78358 180 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 PRR3P79522 188 aaKnown RBP1.62□□□□□ -2.15
GPHN-212ENST00000556240 COX6A2Q02221 97 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 MAJINQ3KP22 176 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 MRPL51Q4U2R6 128 aaKnown RBP1.62□□□□□ -2.15
GPHN-212ENST00000556240 SPINK6Q6UWN8 80 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 ORMDL3Q8N138 153 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 DPH3Q96FX2 82 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 IMMP2LQ96T52 175 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 C2orf88Q9BSF0 95 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 MAP1LC3AQ9H492 121 aa1.62□□□□□ -2.15
GPHN-212ENST00000556240 MRPL35Q9NZE8 188 aaKnown RBP1.62□□□□□ -2.15
GPHN-212ENST00000556240 A0A096LNI7 61 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 TRBV30A0A0K0K1B3 111 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 D6R8Y8 96 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 SPAG11BQ08648 103 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 Q6ZUT4 128 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 FAM19A3Q7Z5A8 133 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 ZCCHC13Q8WW36 166 aaKnown RBP1.61□□□□□ -2.15
GPHN-212ENST00000556240 TMEM141Q96I45 108 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 LINC01600Q96MT4 127 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 PRELID3AQ96N28 172 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 NXT2Q9NPJ8 142 aaKnown RBP1.61□□□□□ -2.15
GPHN-212ENST00000556240 CYSLTR1Q9Y271 337 aa1.61□□□□□ -2.15
GPHN-212ENST00000556240 HERC1Q15751 4861 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 TRAV13-1A0A0B4J241 112 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 IGHV3OR16-9A0A0B4J2B5 98 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 A0A0J9YXV3 536 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 NDUFC2-KCTD14E9PQ53 114 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 SMKR1H3BMG3 65 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.6□□□□□ -2.15
GPHN-212ENST00000556240 NUPR1O60356 82 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 NPYP01303 97 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 MT-ND6P03923 174 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 S100PP25815 95 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 HERVK_113P63121 156 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 RPL18AQ02543 176 aaKnown RBP1.6□□□□□ -2.15
GPHN-212ENST00000556240 MRPL54Q6P161 138 aaKnown RBP1.6□□□□□ -2.15
GPHN-212ENST00000556240 SFTA2Q6UW10 78 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 TMEM136Q6ZRR5 245 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 Q8IZM0 81 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 Q8N8P6 123 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 ORAOV1Q8WV07 137 aa1.6□□□□□ -2.15
GPHN-212ENST00000556240 PACRGQ96M98 296 aaPredicted RBP1.6□□□□□ -2.15
GPHN-212ENST00000556240 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
GPHN-212ENST00000556240 C9JQL5 133 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 MT1HL1P0DM35 61 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 UBE2D1P51668 147 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 CKS1BP61024 79 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 RPL39P62891 51 aaKnown RBP1.59□□□□□ -2.15
GPHN-212ENST00000556240 C9orf116Q5BN46 136 aaPredicted RBP1.59□□□□□ -2.15
GPHN-212ENST00000556240 CLLU1Q5K131 121 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 C5orf38Q86SI9 138 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 DIRC1Q969H9 104 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 AMELXQ99217 191 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 SEC11CQ9BY50 192 aa1.59□□□□□ -2.15
GPHN-212ENST00000556240 TP73-AS1Q9UF72 201 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms