RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TRBV6-5A0A0K0K1A5 114 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 IGKCP01834 107 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
PSEN1-216ENST00000556066 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 OR5A1Q8NGJ0 315 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 C7orf33Q8WU49 177 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 LINC00526Q96FQ7 95 aa4.24□□□□□ -1.73
PSEN1-216ENST00000556066 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
PSEN1-216ENST00000556066 GVQW2A0A096LPI5 108 aaPredicted RBP4.23□□□□□ -1.73
PSEN1-216ENST00000556066 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 LINC00959A0A1B0GUT2 108 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.23□□□□□ -1.73
PSEN1-216ENST00000556066 K7EMI3 77 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 CCL25O15444 150 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 DPM2O94777 84 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 TSHBP01222 138 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 RPL39P62891 51 aaKnown RBP4.23□□□□□ -1.73
PSEN1-216ENST00000556066 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
PSEN1-216ENST00000556066 SS18Q15532 418 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 C2orf91Q6ZV80 131 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 PLAC8Q9NZF1 115 aa4.23□□□□□ -1.73
PSEN1-216ENST00000556066 A0A096LNI7 61 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 TRBV27A0A0K0K1C4 114 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 NMUP48645 174 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 COL5A1-AS1Q5SY13 56 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 BVES-AS1Q5T3Y7 98 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 Q6ZRU5 148 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 Q6ZVH6 145 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
PSEN1-216ENST00000556066 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 CYSLTR1Q9Y271 337 aa4.22□□□□□ -1.73
PSEN1-216ENST00000556066 A0A087WZ39 114 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 IGHV1-58A0A0C4DH39 117 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 IGIPA6NJ69 53 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 F8VRH5 84 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
PSEN1-216ENST00000556066 Q6ZVQ6 151 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
PSEN1-216ENST00000556066 DLEU1O43261 78 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 MT1HL1P0DM35 61 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 SYCNQ0VAF6 134 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 PMVKQ15126 192 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 LINC00474Q9P2X8 69 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
PSEN1-216ENST00000556066 TNXBP22105 4242 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 IGLV4-69A0A075B6H9 119 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 TRAV13-1A0A0B4J241 112 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 C11orf86A6NJI1 115 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 COX7A2LO14548 114 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 PLNP26678 52 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
PSEN1-216ENST00000556066 RPL18AQ02543 176 aaKnown RBP4.19□□□□□ -1.74
PSEN1-216ENST00000556066 SMAGPQ0VAQ4 97 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 FAM104AQ969W3 186 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 TIMM17AQ99595 171 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 SIGMAR1Q99720 223 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 CST9LQ9H4G1 147 aa4.19□□□□□ -1.74
PSEN1-216ENST00000556066 IGLV4-3A0A075B6K6 122 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 A6NDN8 102 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 LINC01549A6NIU2 74 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 Q6ZUT4 128 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 PPDPFQ9H3Y8 114 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 UBE2D4Q9Y2X8 147 aa4.18□□□□□ -1.74
PSEN1-216ENST00000556066 LOC107984640A0A0U1RRK4 108 aa4.17□□□□□ -1.74
PSEN1-216ENST00000556066 HSD52Q0P140 79 aa4.17□□□□□ -1.74
PSEN1-216ENST00000556066 CAMK2N2Q96S95 79 aa4.17□□□□□ -1.74
PSEN1-216ENST00000556066 HIGD1BQ9P298 99 aa4.17□□□□□ -1.74
PSEN1-216ENST00000556066 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 E9PLD3 99 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 APOMO95445 188 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 SPAG11BQ08648 103 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 Q6ZRP5 223 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 OR13C6PQ8NH95 151 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 PLEKHB2Q96CS7 222 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 LINC01600Q96MT4 127 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
PSEN1-216ENST00000556066 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 A0A1W2PNN7 141 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 FXYD2P54710 66 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 TSPEAR-AS2P59090 65 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 SEC11AP67812 179 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 TMEM170BQ5T4T1 132 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 REG3GQ6UW15 175 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 SPINK6Q6UWN8 80 aa4.15□□□□□ -1.75
PSEN1-216ENST00000556066 C2orf48Q96LS8 159 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms