RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 FAM30AQ9NZY2 134 aa4.86□□□□□ -1.63
PCNX4-211ENST00000555929 ERG28Q9UKR5 140 aa4.86□□□□□ -1.63
PCNX4-211ENST00000555929 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
PCNX4-211ENST00000555929 BIRC6Q9NR09 4857 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 NDUFC2-KCTD14E9PQ53 114 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 SPATA45Q537H7 98 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 PCP2Q8IVA1 136 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 XAGE1AQ9HD64 81 aa4.85□□□□□ -1.63
PCNX4-211ENST00000555929 A0A0J9YXY3 114 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 LINC00587B1AMM8 73 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 PANO1I0J062 215 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 CIRBPQ14011 172 aaKnown RBP4.84□□□□□ -1.63
PCNX4-211ENST00000555929 DAND5Q8N907 189 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
PCNX4-211ENST00000555929 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 LOC105371267A0A1B0GV96 52 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 NPC2P61916 151 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 S100A12P80511 92 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 COX17Q14061 63 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 FAM19A5Q7Z5A7 132 aaPredicted RBP4.83□□□□□ -1.64
PCNX4-211ENST00000555929 MIR7-3HGQ8N6C7 128 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
PCNX4-211ENST00000555929 A0A087WYN8 130 aa4.82□□□□□ -1.64
PCNX4-211ENST00000555929 FAM168BA1KXE4 195 aa4.82□□□□□ -1.64
PCNX4-211ENST00000555929 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
PCNX4-211ENST00000555929 SPACA4Q8TDM5 124 aa4.82□□□□□ -1.64
PCNX4-211ENST00000555929 RYR1P21817 5038 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
PCNX4-211ENST00000555929 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 SCXQ7RTU7 201 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 CIRBP-AS1Q8TBR5 109 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
PCNX4-211ENST00000555929 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 COX8AP10176 69 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 XGP55808 180 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 SRSF9Q13242 221 aaKnown RBP eCLIP4.8□□□□□ -1.64
PCNX4-211ENST00000555929 SLC25A34Q6PIV7 304 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 Q6ZSA8 131 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 BOD1L2Q8IYS8 172 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 MIEN1Q9BRT3 115 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
PCNX4-211ENST00000555929 KIAA1109Q2LD37 5005 aa4.79□□□□□ -1.64
PCNX4-211ENST00000555929 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
PCNX4-211ENST00000555929 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
PCNX4-211ENST00000555929 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
PCNX4-211ENST00000555929 GAGE10A6NGK3 116 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 M0QXV9 152 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 NCR3O14931 201 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 TIMM17BO60830 172 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 CDK2AP2O75956 126 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 SMIM6P0DI80 62 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 UBE2BP63146 152 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
PCNX4-211ENST00000555929 RPL24P83731 157 aaKnown RBP4.78□□□□□ -1.64
PCNX4-211ENST00000555929 LITAFQ99732 161 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 PRO1933Q9H354 126 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
PCNX4-211ENST00000555929 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
PCNX4-211ENST00000555929 MUSTN1Q8IVN3 82 aa4.77□□□□□ -1.65
PCNX4-211ENST00000555929 LINC00308Q8TCZ7 52 aa4.77□□□□□ -1.65
PCNX4-211ENST00000555929 C7orf33Q8WU49 177 aa4.77□□□□□ -1.65
PCNX4-211ENST00000555929 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
PCNX4-211ENST00000555929 C12orf57Q99622 126 aa4.77□□□□□ -1.65
PCNX4-211ENST00000555929 RPL37AP8A6NKH3 93 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 DLEU1O43261 78 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 PLA2G1BP04054 148 aaKnown RBP4.76□□□□□ -1.65
PCNX4-211ENST00000555929 LBHQ53QV2 105 aaPredicted RBP4.76□□□□□ -1.65
PCNX4-211ENST00000555929 SOSTDC1Q6X4U4 206 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 Q8NDZ9 215 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 COPS9Q8WXC6 57 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 SPANXDQ9BXN6 97 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 SPANXCQ9NY87 97 aa4.76□□□□□ -1.65
PCNX4-211ENST00000555929 IGKV2-28A0A075B6P5 120 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 IGKV2D-28P01615 120 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 VPREB1P12018 145 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 IFITM1P13164 125 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 Q6ZVH6 145 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
PCNX4-211ENST00000555929 OR13C6PQ8NH95 151 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 LINC00167Q96N53 147 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 UQCR10Q9UDW1 63 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 PLA2G2DQ9UNK4 145 aa4.75□□□□□ -1.65
PCNX4-211ENST00000555929 M0R378 163 aa4.74□□□□□ -1.65
PCNX4-211ENST00000555929 S100A7L2Q5SY68 101 aa4.74□□□□□ -1.65
PCNX4-211ENST00000555929 SPANXB1Q9NS25 103 aaPredicted RBP4.74□□□□□ -1.65
PCNX4-211ENST00000555929 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
PCNX4-211ENST00000555929 LOC107984156A0A0G2JMH3 177 aa4.73□□□□□ -1.65
PCNX4-211ENST00000555929 HNRNPA3P51991 378 aaKnown RBP4.73□□□□□ -1.65
PCNX4-211ENST00000555929 RPL37AP61513 92 aaKnown RBP4.73□□□□□ -1.65
PCNX4-211ENST00000555929 C2orf91Q6ZV80 131 aa4.73□□□□□ -1.65
PCNX4-211ENST00000555929 ARL17AQ8IVW1 177 aa4.73□□□□□ -1.65
PCNX4-211ENST00000555929 HIGD1BQ9P298 99 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms