RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 HIST1H4GQ99525 98 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
ACTN1-215ENST00000555616 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
ACTN1-215ENST00000555616 A0A0J9YXY3 114 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 A6NDN8 102 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 TIMM17BO60830 172 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 Q6ZRU5 148 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 CEND1Q8N111 149 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 LINC00528Q8N1L1 170 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 C9orf163Q8N9P6 203 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 ERG28Q9UKR5 140 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
ACTN1-215ENST00000555616 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
ACTN1-215ENST00000555616 COX17Q14061 63 aa6.18□□□□□ -1.42
ACTN1-215ENST00000555616 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
ACTN1-215ENST00000555616 C10orf25Q5T742 122 aa6.18□□□□□ -1.42
ACTN1-215ENST00000555616 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
ACTN1-215ENST00000555616 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
ACTN1-215ENST00000555616 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
ACTN1-215ENST00000555616 PTTG1IPP53801 180 aa6.17□□□□□ -1.42
ACTN1-215ENST00000555616 LINC00158P58513 81 aa6.17□□□□□ -1.42
ACTN1-215ENST00000555616 Q6ZVH6 145 aa6.17□□□□□ -1.42
ACTN1-215ENST00000555616 SLPIP03973 132 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 PFN2P35080 140 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 FXYD2P54710 66 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 SDIM1Q6ZPB5 146 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 LITAFQ99732 161 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 SPANXCQ9NY87 97 aa6.16□□□□□ -1.42
ACTN1-215ENST00000555616 FLG2Q5D862 2391 aaPredicted RBP6.15□□□□□ -1.42
ACTN1-215ENST00000555616 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
ACTN1-215ENST00000555616 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.42
ACTN1-215ENST00000555616 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
ACTN1-215ENST00000555616 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
ACTN1-215ENST00000555616 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
ACTN1-215ENST00000555616 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
ACTN1-215ENST00000555616 HERC1Q15751 4861 aa6.15□□□□□ -1.43
ACTN1-215ENST00000555616 LOC107984640A0A0U1RRK4 108 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 PANO1I0J062 215 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 TLX1NBP0CAT3 122 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 IFITM1P13164 125 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 C21orf62-AS1Q17RA5 79 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
ACTN1-215ENST00000555616 A0A1B0GWB2 263 aa6.13□□□□□ -1.43
ACTN1-215ENST00000555616 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
ACTN1-215ENST00000555616 RPL24P83731 157 aaKnown RBP6.13□□□□□ -1.43
ACTN1-215ENST00000555616 RPL18AQ02543 176 aaKnown RBP6.13□□□□□ -1.43
ACTN1-215ENST00000555616 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
ACTN1-215ENST00000555616 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
ACTN1-215ENST00000555616 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
ACTN1-215ENST00000555616 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
ACTN1-215ENST00000555616 DAND5Q8N907 189 aa6.12□□□□□ -1.43
ACTN1-215ENST00000555616 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
ACTN1-215ENST00000555616 SND1-IT1Q9HBX3 110 aa6.12□□□□□ -1.43
ACTN1-215ENST00000555616 A0A1B0GV90 55 aa6.11□□□□□ -1.43
ACTN1-215ENST00000555616 GAGE2EQ4V326 116 aa6.11□□□□□ -1.43
ACTN1-215ENST00000555616 Q6ZRP5 223 aa6.11□□□□□ -1.43
ACTN1-215ENST00000555616 LINC00474Q9P2X8 69 aa6.11□□□□□ -1.43
ACTN1-215ENST00000555616 GAGE2DQ9UEU5 116 aa6.11□□□□□ -1.43
ACTN1-215ENST00000555616 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
ACTN1-215ENST00000555616 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
ACTN1-215ENST00000555616 GAGE2BQ13066 116 aa6.1□□□□□ -1.43
ACTN1-215ENST00000555616 LINC00308Q8TCZ7 52 aa6.1□□□□□ -1.43
ACTN1-215ENST00000555616 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
ACTN1-215ENST00000555616 A0A0B4J2C4 111 aa6.09□□□□□ -1.43
ACTN1-215ENST00000555616 A4D1N5 150 aa6.09□□□□□ -1.43
ACTN1-215ENST00000555616 K7ERJ3 54 aa6.09□□□□□ -1.43
ACTN1-215ENST00000555616 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
ACTN1-215ENST00000555616 NPC2P61916 151 aa6.09□□□□□ -1.43
ACTN1-215ENST00000555616 A0A087WYN8 130 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 A0A096LNI7 61 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 IGKV2-24A0A0C4DH68 120 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 RAB37Q96AX2 223 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
ACTN1-215ENST00000555616 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
ACTN1-215ENST00000555616 CFC1BP0CG36 223 aa6.07□□□□□ -1.44
ACTN1-215ENST00000555616 CFC1P0CG37 223 aa6.07□□□□□ -1.44
ACTN1-215ENST00000555616 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
ACTN1-215ENST00000555616 H3BUT2 72 aa6.06□□□□□ -1.44
ACTN1-215ENST00000555616 NDUFC2O95298 119 aa6.06□□□□□ -1.44
ACTN1-215ENST00000555616 C9orf129Q5T035 196 aaKnown RBP6.06□□□□□ -1.44
ACTN1-215ENST00000555616 DPH3Q96FX2 82 aa6.06□□□□□ -1.44
ACTN1-215ENST00000555616 PRO1854Q9UHT4 67 aa6.06□□□□□ -1.44
ACTN1-215ENST00000555616 PLA2G2DQ9UNK4 145 aa6.06□□□□□ -1.44
ACTN1-215ENST00000555616 EIF4EBP3O60516 100 aaPredicted RBP6.05□□□□□ -1.44
ACTN1-215ENST00000555616 VAMP3Q15836 100 aa6.05□□□□□ -1.44
ACTN1-215ENST00000555616 NKAPP1Q8N9T2 125 aa6.05□□□□□ -1.44
ACTN1-215ENST00000555616 A0A1W2PPM0 123 aa6.04□□□□□ -1.44
ACTN1-215ENST00000555616 J3QL48 77 aa6.04□□□□□ -1.44
ACTN1-215ENST00000555616 FABP2P12104 132 aa6.04□□□□□ -1.44
ACTN1-215ENST00000555616 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
ACTN1-215ENST00000555616 TSPAN13O95857 204 aa6.03□□□□□ -1.44
ACTN1-215ENST00000555616 OXTP01178 125 aa6.03□□□□□ -1.44
ACTN1-215ENST00000555616 VPREB1P12018 145 aa6.03□□□□□ -1.44
ACTN1-215ENST00000555616 LYRM7Q5U5X0 104 aa6.03□□□□□ -1.44
ACTN1-215ENST00000555616 FAM19A5Q7Z5A7 132 aaPredicted RBP6.03□□□□□ -1.44
ACTN1-215ENST00000555616 C7orf33Q8WU49 177 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms