RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NDUFC2O95298 119 aa16.27■□□□□ 0.2
TMEM260-207ENST00000555497 SS18L2Q9UHA2 77 aa16.27■□□□□ 0.2
TMEM260-207ENST00000555497 FAM240AA0A1B0GVK7 77 aa16.27■□□□□ 0.19
TMEM260-207ENST00000555497 B5MCH6 92 aa16.27■□□□□ 0.19
TMEM260-207ENST00000555497 H0YGX0 51 aa16.25■□□□□ 0.19
TMEM260-207ENST00000555497 K7EIL1 84 aa16.23■□□□□ 0.19
TMEM260-207ENST00000555497 C6orf48Q9UBA6 75 aa16.22■□□□□ 0.19
TMEM260-207ENST00000555497 NCR3O14931 201 aa16.22■□□□□ 0.19
TMEM260-207ENST00000555497 CCDC179H3BU77 68 aa16.21■□□□□ 0.18
TMEM260-207ENST00000555497 HIGD2BQ4VC39 106 aa16.21■□□□□ 0.18
TMEM260-207ENST00000555497 MRAPQ8TCY5 172 aa16.21■□□□□ 0.18
TMEM260-207ENST00000555497 GVQW2A0A096LPI5 108 aaPredicted RBP16.2■□□□□ 0.18
TMEM260-207ENST00000555497 TM2D3Q9BRN9 247 aa16.2■□□□□ 0.18
TMEM260-207ENST00000555497 LECT2O14960 151 aa16.19■□□□□ 0.18
TMEM260-207ENST00000555497 LINC01556Q5JQF7 62 aa16.19■□□□□ 0.18
TMEM260-207ENST00000555497 TMEM126AQ9H061 195 aa16.18■□□□□ 0.18
TMEM260-207ENST00000555497 C15orf56Q8N910 161 aa16.17■□□□□ 0.18
TMEM260-207ENST00000555497 DNAL4O96015 105 aa16.16■□□□□ 0.18
TMEM260-207ENST00000555497 MUC7Q8TAX7 377 aa16.16■□□□□ 0.18
TMEM260-207ENST00000555497 HUWE1Q7Z6Z7 4374 aaKnown RBP16.15■□□□□ 0.18
TMEM260-207ENST00000555497 SLPIP03973 132 aa16.15■□□□□ 0.18
TMEM260-207ENST00000555497 TRBV7-7A0A0K0K1E9 115 aa16.14■□□□□ 0.17
TMEM260-207ENST00000555497 ZNF561-AS1K7EIQ3 104 aa16.14■□□□□ 0.17
TMEM260-207ENST00000555497 TRAV10A0A0B4J240 114 aa16.13■□□□□ 0.17
TMEM260-207ENST00000555497 C9orf129Q5T035 196 aaKnown RBP16.13■□□□□ 0.17
TMEM260-207ENST00000555497 XAGE1AQ9HD64 81 aa16.13■□□□□ 0.17
TMEM260-207ENST00000555497 CAMK2N2Q96S95 79 aa16.12■□□□□ 0.17
TMEM260-207ENST00000555497 C1orf43Q9BWL3 253 aa16.12■□□□□ 0.17
TMEM260-207ENST00000555497 MGAM2Q2M2H8 2515 aa16.11■□□□□ 0.17
TMEM260-207ENST00000555497 ACYP1P07311 99 aa16.11■□□□□ 0.17
TMEM260-207ENST00000555497 IGKV2D-24A0A075B6R9 120 aa16.1■□□□□ 0.17
TMEM260-207ENST00000555497 DNAH10OSP0CZ25 163 aa16.1■□□□□ 0.17
TMEM260-207ENST00000555497 S100A7L2Q5SY68 101 aa16.1■□□□□ 0.17
TMEM260-207ENST00000555497 Q6ZRU5 148 aa16.1■□□□□ 0.17
TMEM260-207ENST00000555497 RPL18AQ02543 176 aaKnown RBP16.09■□□□□ 0.17
TMEM260-207ENST00000555497 C6orf99Q4VX62 202 aa16.09■□□□□ 0.17
TMEM260-207ENST00000555497 LINC00588Q9Y4M8 146 aa16.09■□□□□ 0.17
TMEM260-207ENST00000555497 IGLV6-57P01721 117 aa16.06■□□□□ 0.16
TMEM260-207ENST00000555497 LINC00167Q96N53 147 aa16.06■□□□□ 0.16
TMEM260-207ENST00000555497 Q8N814 137 aa16.06■□□□□ 0.16
TMEM260-207ENST00000555497 IMUPQ9GZP8 106 aa16.05■□□□□ 0.16
TMEM260-207ENST00000555497 C2orf48Q96LS8 159 aa16.04■□□□□ 0.16
TMEM260-207ENST00000555497 ORMDL1Q9P0S3 153 aa16.03■□□□□ 0.16
TMEM260-207ENST00000555497 OBSCN-AS1Q96MR7 158 aa16.02■□□□□ 0.16
TMEM260-207ENST00000555497 A0A1B0GX51 115 aa16.01■□□□□ 0.15
TMEM260-207ENST00000555497 INAFM2P0DMQ5 153 aa16.01■□□□□ 0.15
TMEM260-207ENST00000555497 TRBV10-3A0A0K0K1G6 114 aa16■□□□□ 0.15
TMEM260-207ENST00000555497 SMCR5Q8TEV8 140 aa15.99■□□□□ 0.15
TMEM260-207ENST00000555497 C14orf132Q9NPU4 83 aa15.99■□□□□ 0.15
TMEM260-207ENST00000555497 SDIM1Q6ZPB5 146 aa15.99■□□□□ 0.15
TMEM260-207ENST00000555497 LINC00643Q86TS7 51 aa15.99■□□□□ 0.15
TMEM260-207ENST00000555497 NDUFC2-KCTD14E9PQ53 114 aa15.98■□□□□ 0.15
TMEM260-207ENST00000555497 VPREB1P12018 145 aa15.98■□□□□ 0.15
TMEM260-207ENST00000555497 LINC00575Q6W349 94 aa15.98■□□□□ 0.15
TMEM260-207ENST00000555497 MDFIQ99750 246 aa15.98■□□□□ 0.15
TMEM260-207ENST00000555497 CASC10Q5T4H9 136 aa15.96■□□□□ 0.15
TMEM260-207ENST00000555497 FAM236AA0A1B0GUQ0 79 aa15.96■□□□□ 0.15
TMEM260-207ENST00000555497 FAM236BA0A1B0GV22 79 aa15.96■□□□□ 0.15
TMEM260-207ENST00000555497 GAGE2AQ6NT46 116 aa15.96■□□□□ 0.15
TMEM260-207ENST00000555497 Q6ZRP5 223 aa15.96■□□□□ 0.15
TMEM260-207ENST00000555497 COL7A1Q02388 2944 aa15.95■□□□□ 0.14
TMEM260-207ENST00000555497 SYCNQ0VAF6 134 aa15.95■□□□□ 0.14
TMEM260-207ENST00000555497 TRAV23DV6A0A075B6W5 121 aa15.92■□□□□ 0.14
TMEM260-207ENST00000555497 DNAH1Q9P2D7 4330 aa15.92■□□□□ 0.14
TMEM260-207ENST00000555497 SMIM20Q8N5G0 67 aa15.91■□□□□ 0.14
TMEM260-207ENST00000555497 F8WDY8 70 aa15.91■□□□□ 0.14
TMEM260-207ENST00000555497 hADV29S1A0JD25 119 aa15.9■□□□□ 0.14
TMEM260-207ENST00000555497 STAB2Q8WWQ8 2551 aa15.89■□□□□ 0.14
TMEM260-207ENST00000555497 TMEM256-PLSCR3K7ERE1 68 aa15.88■□□□□ 0.13
TMEM260-207ENST00000555497 USP17L23D6RBM5 183 aa15.87■□□□□ 0.13
TMEM260-207ENST00000555497 M0R378 163 aa15.87■□□□□ 0.13
TMEM260-207ENST00000555497 DIRC1Q969H9 104 aa15.87■□□□□ 0.13
TMEM260-207ENST00000555497 UPK3BQ9BT76 320 aa15.87■□□□□ 0.13
TMEM260-207ENST00000555497 ZNF73O43830 326 aaPredicted RBP15.87■□□□□ 0.13
TMEM260-207ENST00000555497 DNAH9Q9NYC9 4486 aa15.86■□□□□ 0.13
TMEM260-207ENST00000555497 C3orf22Q8N5N4 141 aa15.82■□□□□ 0.12
TMEM260-207ENST00000555497 Q6ZQY7 126 aa15.81■□□□□ 0.12
TMEM260-207ENST00000555497 JMJD7-PLA2G4BH0Y9G9 81 aa15.8■□□□□ 0.12
TMEM260-207ENST00000555497 COX7BP24311 80 aa15.8■□□□□ 0.12
TMEM260-207ENST00000555497 SERTAD4-AS1Q5TG53 156 aa15.8■□□□□ 0.12
TMEM260-207ENST00000555497 UQCRQO14949 82 aa15.8■□□□□ 0.12
TMEM260-207ENST00000555497 ELOF1P60002 83 aaKnown RBP15.8■□□□□ 0.12
TMEM260-207ENST00000555497 LINC00846Q9NV44 126 aa15.8■□□□□ 0.12
TMEM260-207ENST00000555497 CCKP06307 115 aa15.78■□□□□ 0.12
TMEM260-207ENST00000555497 TLX1NBP0CAT3 122 aa15.78■□□□□ 0.12
TMEM260-207ENST00000555497 RMI2Q96E14 147 aa15.78■□□□□ 0.12
TMEM260-207ENST00000555497 C9orf153Q5TBE3 101 aa15.78■□□□□ 0.12
TMEM260-207ENST00000555497 KRTAP1-5Q9BYS1 174 aa15.78■□□□□ 0.12
TMEM260-207ENST00000555497 TRBV7-6A0A0J9YX20 115 aa15.76■□□□□ 0.11
TMEM260-207ENST00000555497 LYSTQ99698 3801 aa15.76■□□□□ 0.11
TMEM260-207ENST00000555497 HIST1H4AP62805 103 aaKnown RBP15.75■□□□□ 0.11
TMEM260-207ENST00000555497 C7orf33Q8WU49 177 aa15.73■□□□□ 0.11
TMEM260-207ENST00000555497 B9D2Q9BPU9 175 aa15.73■□□□□ 0.11
TMEM260-207ENST00000555497 FAM168BA1KXE4 195 aa15.72■□□□□ 0.11
TMEM260-207ENST00000555497 LINC00528Q8N1L1 170 aa15.72■□□□□ 0.11
TMEM260-207ENST00000555497 APLNQ9ULZ1 77 aa15.72■□□□□ 0.11
TMEM260-207ENST00000555497 NKAPP1Q8N9T2 125 aa15.71■□□□□ 0.11
TMEM260-207ENST00000555497 COX7CP15954 63 aa15.71■□□□□ 0.1
TMEM260-207ENST00000555497 LAMTOR3Q9UHA4 124 aa15.71■□□□□ 0.1
TMEM260-207ENST00000555497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms