RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TLX1NBP0CAT3 122 aa13.03□□□□□ -0.32
FOXN3-209ENST00000555353 SMIM13P0DJ93 91 aa13.03□□□□□ -0.32
FOXN3-209ENST00000555353 PRO1933Q9H354 126 aa13.03□□□□□ -0.32
FOXN3-209ENST00000555353 A0A0U1RRA0 63 aa13.03□□□□□ -0.32
FOXN3-209ENST00000555353 RPL18AQ02543 176 aaKnown RBP13.02□□□□□ -0.33
FOXN3-209ENST00000555353 GAGE2BQ13066 116 aa13.02□□□□□ -0.33
FOXN3-209ENST00000555353 PLA2G1BP04054 148 aaKnown RBP13.01□□□□□ -0.33
FOXN3-209ENST00000555353 PTTG1IPP53801 180 aa13.01□□□□□ -0.33
FOXN3-209ENST00000555353 MIEN1Q9BRT3 115 aa13□□□□□ -0.33
FOXN3-209ENST00000555353 TP73-AS1Q9UF72 201 aa13□□□□□ -0.33
FOXN3-209ENST00000555353 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
FOXN3-209ENST00000555353 PLAC8Q9NZF1 115 aa12.99□□□□□ -0.33
FOXN3-209ENST00000555353 HIGD1BQ9P298 99 aa12.99□□□□□ -0.33
FOXN3-209ENST00000555353 Q6ZVH6 145 aa12.98□□□□□ -0.33
FOXN3-209ENST00000555353 SRSF9Q13242 221 aaKnown RBP eCLIP12.98□□□□□ -0.333e-8■■■■□ 26.7
FOXN3-209ENST00000555353 LITAFQ99732 161 aa12.98□□□□□ -0.33
FOXN3-209ENST00000555353 HNRNPA3P51991 378 aaKnown RBP12.97□□□□□ -0.33
FOXN3-209ENST00000555353 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 Q6ZRP5 223 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 SPANXDQ9BXN6 97 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 SPANXB1Q9NS25 103 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-209ENST00000555353 SPANXCQ9NY87 97 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
FOXN3-209ENST00000555353 ADAMTSL4-AS1Q5T5F5 129 aa12.96□□□□□ -0.33
FOXN3-209ENST00000555353 ABCA13Q86UQ4 5058 aa12.96□□□□□ -0.34
FOXN3-209ENST00000555353 DAND5Q8N907 189 aa12.95□□□□□ -0.34
FOXN3-209ENST00000555353 SRRM2Q9UQ35 2752 aaKnown RBP12.95□□□□□ -0.34
FOXN3-209ENST00000555353 C2orf91Q6ZV80 131 aa12.94□□□□□ -0.34
FOXN3-209ENST00000555353 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
FOXN3-209ENST00000555353 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
FOXN3-209ENST00000555353 INAFM2P0DMQ5 153 aa12.93□□□□□ -0.34
FOXN3-209ENST00000555353 IFITM1P13164 125 aa12.93□□□□□ -0.34
FOXN3-209ENST00000555353 RPL37AP61513 92 aaKnown RBP12.93□□□□□ -0.34
FOXN3-209ENST00000555353 C7orf33Q8WU49 177 aa12.93□□□□□ -0.34
FOXN3-209ENST00000555353 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
FOXN3-209ENST00000555353 TAL2Q16559 108 aa12.91□□□□□ -0.34
FOXN3-209ENST00000555353 LINC00308Q8TCZ7 52 aa12.9□□□□□ -0.34
FOXN3-209ENST00000555353 NPC2P61916 151 aa12.9□□□□□ -0.35
FOXN3-209ENST00000555353 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
FOXN3-209ENST00000555353 VPS13BQ7Z7G8 4022 aa12.88□□□□□ -0.35
FOXN3-209ENST00000555353 LOC107984156A0A0G2JMH3 177 aa12.88□□□□□ -0.35
FOXN3-209ENST00000555353 HSD52Q0P140 79 aa12.88□□□□□ -0.35
FOXN3-209ENST00000555353 ARL17AQ8IVW1 177 aa12.88□□□□□ -0.35
FOXN3-209ENST00000555353 A0A1W2PNN7 141 aa12.87□□□□□ -0.35
FOXN3-209ENST00000555353 C9orf129Q5T035 196 aaKnown RBP12.87□□□□□ -0.35
FOXN3-209ENST00000555353 MUSTN1Q8IVN3 82 aa12.87□□□□□ -0.35
FOXN3-209ENST00000555353 KRTAP10-4P60372 401 aaPredicted RBP12.86□□□□□ -0.35
FOXN3-209ENST00000555353 RPL24P83731 157 aaKnown RBP12.86□□□□□ -0.35
FOXN3-209ENST00000555353 DDTP30046 118 aa12.85□□□□□ -0.35
FOXN3-209ENST00000555353 SOSTDC1Q6X4U4 206 aa12.85□□□□□ -0.35
FOXN3-209ENST00000555353 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-209ENST00000555353 CEND1Q8N111 149 aa12.83□□□□□ -0.36
FOXN3-209ENST00000555353 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
FOXN3-209ENST00000555353 FAM168BA1KXE4 195 aa12.82□□□□□ -0.36
FOXN3-209ENST00000555353 NDUFC2O95298 119 aa12.82□□□□□ -0.36
FOXN3-209ENST00000555353 CTAG1AP78358 180 aa12.81□□□□□ -0.36
FOXN3-209ENST00000555353 FAM19A5Q7Z5A7 132 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-209ENST00000555353 TMEM238LA0A1B0GVL6 79 aa12.81□□□□□ -0.36
FOXN3-209ENST00000555353 A6NJY4 79 aa12.81□□□□□ -0.36
FOXN3-209ENST00000555353 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
FOXN3-209ENST00000555353 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
FOXN3-209ENST00000555353 M0R143 59 aa12.79□□□□□ -0.36
FOXN3-209ENST00000555353 VPREB1P12018 145 aa12.78□□□□□ -0.36
FOXN3-209ENST00000555353 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
FOXN3-209ENST00000555353 A4D1N5 150 aa12.77□□□□□ -0.36
FOXN3-209ENST00000555353 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.36
FOXN3-209ENST00000555353 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.36
FOXN3-209ENST00000555353 IGLV5-37A0A075B6J1 123 aa12.77□□□□□ -0.37
FOXN3-209ENST00000555353 M0QXV9 152 aa12.76□□□□□ -0.37
FOXN3-209ENST00000555353 TRBV10-2A0A0K0K1G8 114 aa12.75□□□□□ -0.37
FOXN3-209ENST00000555353 PCP4L1A6NKN8 68 aa12.75□□□□□ -0.37
FOXN3-209ENST00000555353 M0R378 163 aa12.74□□□□□ -0.37
FOXN3-209ENST00000555353 NCR3O14931 201 aa12.74□□□□□ -0.37
FOXN3-209ENST00000555353 KRTAP7-1Q8IUC3 87 aa12.74□□□□□ -0.37
FOXN3-209ENST00000555353 C22orf24Q9Y442 160 aa12.74□□□□□ -0.37
FOXN3-209ENST00000555353 HINT1P49773 126 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-209ENST00000555353 FXYD2P54710 66 aa12.73□□□□□ -0.37
FOXN3-209ENST00000555353 LBHQ53QV2 105 aaPredicted RBP12.73□□□□□ -0.37
FOXN3-209ENST00000555353 Q8NDZ9 215 aa12.73□□□□□ -0.37
FOXN3-209ENST00000555353 BVES-AS1Q5T3Y7 98 aa12.73□□□□□ -0.37
FOXN3-209ENST00000555353 MRPL55Q7Z7F7 128 aaKnown RBP12.72□□□□□ -0.37
FOXN3-209ENST00000555353 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
FOXN3-209ENST00000555353 S100A7L2Q5SY68 101 aa12.71□□□□□ -0.37
FOXN3-209ENST00000555353 UBE2BP63146 152 aa12.7□□□□□ -0.38
FOXN3-209ENST00000555353 OR13C6PQ8NH95 151 aa12.7□□□□□ -0.38
FOXN3-209ENST00000555353 RAB37Q96AX2 223 aa12.7□□□□□ -0.38
FOXN3-209ENST00000555353 PSORS1C2Q9UIG4 136 aa12.7□□□□□ -0.38
FOXN3-209ENST00000555353 MYCBP2O75592 4640 aa12.7□□□□□ -0.38
FOXN3-209ENST00000555353 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
FOXN3-209ENST00000555353 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
FOXN3-209ENST00000555353 A0A0B4J2C4 111 aa12.69□□□□□ -0.38
FOXN3-209ENST00000555353 NHP2Q9NX24 153 aaKnown RBP12.69□□□□□ -0.38
FOXN3-209ENST00000555353 A6NDN8 102 aa12.68□□□□□ -0.38
FOXN3-209ENST00000555353 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
FOXN3-209ENST00000555353 CFC1P0CG37 223 aa12.68□□□□□ -0.38
FOXN3-209ENST00000555353 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
FOXN3-209ENST00000555353 CBY1Q9Y3M2 126 aa12.68□□□□□ -0.38
FOXN3-209ENST00000555353 GAGE10A6NGK3 116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms