RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	NUP35	Q8NFH5	326 aa		2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	MUC2	Q02817	5179 aa		2.94	□□□□□ -1.94
PSMC6-208	ENST00000554956	TRAV13-1	A0A0B4J241	112 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	TRBV27	A0A0K0K1C4	114 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	EIF5A	P63241	154 aa	Known RBP	2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	SS18	Q15532	418 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	COX19	Q49B96	90 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	PDZD11	Q5EBL8	140 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	C1orf137	Q5JT78	98 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	PP632	Q6XCG6	107 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956		Q6ZUT4	128 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	KRTAP5-2	Q701N4	177 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	ST20	Q9HBF5	79 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	BIN3	Q9NQY0	253 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	SPANXB1	Q9NS25	103 aa	Predicted RBP	2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	LINC00474	Q9P2X8	69 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	UBE2D4	Q9Y2X8	147 aa		2.93	□□□□□ -1.94
PSMC6-208	ENST00000554956	LOC107984640	A0A0U1RRK4	108 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	C7orf77	A4D0Y5	90 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	HIGD1C	A8MV81	97 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	COX7A2L	O14548	114 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	APOM	O95445	188 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	IGLV7-43	P04211	117 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	C4orf26	Q17RF5	130 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	LCE1C	Q5T751	118 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	ORMDL3	Q8N138	153 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	BTF3L4	Q96K17	158 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	ANAPC13	Q9BS18	74 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956	TMEM191A	Q9H0A3	160 aa		2.92	□□□□□ -1.94
PSMC6-208	ENST00000554956		A0A1B0GUT8	65 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	TINCR	A0A1B0GVN0	87 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956		A8MWL6	223 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	C1orf196	B1AJZ1	125 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	C8orf87	E5RJ46	101 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	MT-ND6	P03923	174 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	CEBPG	P53567	150 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	RPL39	P62891	51 aa	Known RBP	2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	SPAG11B	Q08648	103 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	LUZP6	Q538Z0	58 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956		Q5W150	140 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	EIF5AL1	Q6IS14	154 aa	Known RBP	2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	TEX261	Q6UWH6	196 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	ALKAL2	Q6UX46	152 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	SMIM15	Q7Z3B0	74 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	SLC51B	Q86UW2	128 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	TSKU	Q8WUA8	353 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	YPEL4	Q96NS1	127 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	SND1-IT1	Q9HBX3	110 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956	ZNF706	Q9Y5V0	76 aa	Predicted RBP	2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956		V9GYV3	84 aa		2.91	□□□□□ -1.94
PSMC6-208	ENST00000554956		C9JQL5	133 aa		2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	TMEM250	H0YL14	139 aa		2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	MRPL51	Q4U2R6	128 aa	Known RBP	2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	FA2H	Q7L5A8	372 aa		2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	TCTE3	Q8IZS6	198 aa		2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	C6orf48	Q9UBA6	75 aa		2.9	□□□□□ -1.95
PSMC6-208	ENST00000554956	SRP19	P09132	144 aa	Known RBP	2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	SCGB1C2	P0DMR2	95 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	FCER1G	P30273	86 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	SMAGP	Q0VAQ4	97 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	DIRC1	Q969H9	104 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	TIMM21	Q9BVV7	248 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	OSTC	Q9NRP0	149 aa		2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	MRPL35	Q9NZE8	188 aa	Known RBP	2.89	□□□□□ -1.95
PSMC6-208	ENST00000554956	ZNF727	A8MUV8	499 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	NPY	P01303	97 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	FAM104B	Q5XKR9	115 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	C2orf82	Q6UX34	121 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	SMIM7	Q9BQ49	75 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	SMDT1	Q9H4I9	107 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	PKIG	Q9Y2B9	76 aa		2.88	□□□□□ -1.95
PSMC6-208	ENST00000554956	TRBV24-1	A0A075B6N3	115 aa		2.87	□□□□□ -1.95
PSMC6-208	ENST00000554956	NDUFA1	O15239	70 aa		2.87	□□□□□ -1.95
PSMC6-208	ENST00000554956	TMEM241	Q24JQ0	296 aa		2.87	□□□□□ -1.95
PSMC6-208	ENST00000554956	OR10D4P	Q8NGN7	298 aa		2.87	□□□□□ -1.95
PSMC6-208	ENST00000554956	BORCS7	Q96B45	105 aa		2.87	□□□□□ -1.95
PSMC6-208	ENST00000554956		A0A1B0GVG6	124 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	SMIM27	A0A1W2PRY6	76 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956		D6R8Y8	96 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	MRPS36	P82909	103 aa	Known RBP	2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	MRPL54	Q6P161	138 aa	Known RBP	2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	FAM19A3	Q7Z5A8	133 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	IMMP2L	Q96T52	175 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	C20orf78	Q9BR46	151 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	SMIM2	Q9BVW6	85 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	EIF5A2	Q9GZV4	153 aa	Known RBP	2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	SPANXA1	Q9NS26	97 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	NAT8B	Q9UHF3	227 aa		2.86	□□□□□ -1.95
PSMC6-208	ENST00000554956	LINC00862	A6NCI5	91 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	PPP1R17	O96001	155 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	CKS2	P33552	79 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	UBE2B	P63146	152 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	HBB	P68871	147 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	ADIRF	Q15847	76 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	PACRG	Q96M98	296 aa	Predicted RBP	2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	MAP1LC3A	Q9H492	121 aa		2.85	□□□□□ -1.95
PSMC6-208	ENST00000554956	XAGE1A	Q9HD64	81 aa		2.85	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms