RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 IAH1Q2TAA2 248 aaPredicted RBP0.59□□□□□ -2.31
PRPF39-208ENST00000554785 UNQ6190/PRO20217Q6UXQ8 127 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 ATP5L2Q7Z4Y8 100 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 S100A7AQ86SG5 101 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 OR2D3Q8NGH3 330 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 NPCDR1Q9BY65 106 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 SMIM3Q9BZL3 60 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 UQCC1Q9NVA1 299 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 TOMM7Q9P0U1 55 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 TPRKBQ9Y3C4 175 aa0.59□□□□□ -2.31
PRPF39-208ENST00000554785 IGHV1-58A0A0C4DH39 117 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 LINC00959A0A1B0GUT2 108 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 DISC1C4P0D8 188 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 H3BPC8 53 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 MT2AP02795 61 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 TCRAP04437 139 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 RPL28P46779 137 aaKnown RBP0.59□□□□□ -2.32
PRPF39-208ENST00000554785 TAS2R45P59539 299 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 KRTAP12-1P59990 96 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 PDE6HQ13956 83 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 COTL1Q14019 142 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 SPCS2Q15005 226 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 FAM74A1Q5RGS3 127 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 RPL39LQ96EH5 51 aaKnown RBP0.59□□□□□ -2.32
PRPF39-208ENST00000554785 BTF3L4Q96K17 158 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 FAM167A-AS1Q96KT0 104 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 RNASE7Q9H1E1 156 aaKnown RBP0.59□□□□□ -2.32
PRPF39-208ENST00000554785 MED9Q9NWA0 146 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 C6orf48Q9UBA6 75 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 ANAPC10Q9UM13 185 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 PRELID1Q9Y255 219 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 ARL2-SNX15V9GYD0 113 aa0.59□□□□□ -2.32
PRPF39-208ENST00000554785 A0A1B0GVG6 124 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM238C9JI98 176 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 COX7A2LO14548 114 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 NMBP08949 121 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 AKAIN1P0CW23 69 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TAS2R30P59541 319 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 RAB5BP61020 215 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 IQCJQ1A5X6 159 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 KHDC3LQ587J8 217 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM128Q5BJH2 165 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C9orf153Q5TBE3 101 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM14EPQ6UXP3 125 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C2orf91Q6ZV80 131 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 STX12Q86Y82 276 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C12orf45Q8N5I9 185 aaPredicted RBP0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SFRP2Q96HF1 295 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 PRRT1Q99946 306 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 NKX6-2Q9C056 277 aaPredicted RBP0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SPANXB1Q9NS25 103 aaPredicted RBP0.58□□□□□ -2.32
PRPF39-208ENST00000554785 NDUFA12Q9UI09 145 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SCP2D1Q9UJQ7 156 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C22orf24Q9Y442 160 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 FAM236DA0A1B0GTK5 79 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TINCRA0A1B0GVN0 87 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C11orf86A6NJI1 115 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 FABP5P3A8MUU1 101 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 NDUFA1O15239 70 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 FAM236CP0DP71 79 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SPRR2EP22531 72 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SPRR2BP35325 72 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 SPRR2AP35326 72 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 CRIP1P50238 77 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 RAB4BP61018 213 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 UBE2G1P62253 170 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 Q6ZUT4 128 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM229BQ8NBD8 167 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 AP1S3Q96PC3 154 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 IMMP2LQ96T52 175 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 Q9BRP9 147 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 MIEN1Q9BRT3 115 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM242Q9NWH2 141 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 TMEM14CQ9P0S9 112 aa0.58□□□□□ -2.32
PRPF39-208ENST00000554785 C9orf170A2RU37 121 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 INMT-MINDY4F8WBC2 141 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 M0QY20 66 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 BCE1O60756 84 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 SIX6O95475 246 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 SFT2D2O95562 160 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 NCR2O95944 276 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 HINT1P49773 126 aaPredicted RBP0.57□□□□□ -2.32
PRPF39-208ENST00000554785 SULT1A1P50225 295 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 FOXA3P55318 350 aaPredicted RBP0.57□□□□□ -2.32
PRPF39-208ENST00000554785 PKIAP61925 76 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 KRTAP19-6Q3LI70 58 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 FP248Q71RG6 208 aaPredicted RBP0.57□□□□□ -2.32
PRPF39-208ENST00000554785 TOMM5Q8N4H5 51 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 C5orf17Q8NAS9 161 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 SMIM4Q8WVI0 70 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 PACRGQ96M98 296 aaPredicted RBP0.57□□□□□ -2.32
PRPF39-208ENST00000554785 SPRR2FQ96RM1 72 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 OTORQ9NRC9 128 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 LENEPQ9Y5L5 61 aa0.57□□□□□ -2.32
PRPF39-208ENST00000554785 A0A0G2JQZ4 141 aa0.56□□□□□ -2.32
PRPF39-208ENST00000554785 A6NN06 94 aa0.56□□□□□ -2.32
PRPF39-208ENST00000554785 C17orf112F2Z3M2 114 aa0.56□□□□□ -2.32
PRPF39-208ENST00000554785 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
PRPF39-208ENST00000554785 S100A11P31949 105 aa0.56□□□□□ -2.32
PRPF39-208ENST00000554785 CDC34P49427 236 aaPredicted RBP0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms