RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
ACTN1-213ENST00000554508 FAM19A5Q7Z5A7 132 aaPredicted RBP5.36□□□□□ -1.55
ACTN1-213ENST00000554508 HMCN2Q8NDA2 5059 aa5.35□□□□□ -1.55
ACTN1-213ENST00000554508 LEPROTO15243 131 aa5.35□□□□□ -1.55
ACTN1-213ENST00000554508 KRTAP10-8P60410 259 aa5.35□□□□□ -1.55
ACTN1-213ENST00000554508 JOSD1Q15040 202 aaPredicted RBP5.35□□□□□ -1.55
ACTN1-213ENST00000554508 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
ACTN1-213ENST00000554508 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
ACTN1-213ENST00000554508 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
ACTN1-213ENST00000554508 ZNF625Q96I27 306 aaPredicted RBP5.35□□□□□ -1.55
ACTN1-213ENST00000554508 J3QQQ9 107 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 M0QXV9 152 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 LGALS3P17931 250 aaKnown RBP5.34□□□□□ -1.55
ACTN1-213ENST00000554508 PFN2P35080 140 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 UBE2BP63146 152 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 KRTAP7-1Q8IUC3 87 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 C12orf57Q99622 126 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
ACTN1-213ENST00000554508 E9PLD3 99 aa5.33□□□□□ -1.56
ACTN1-213ENST00000554508 TSPEAR-AS2P59090 65 aa5.33□□□□□ -1.56
ACTN1-213ENST00000554508 DIRC1Q969H9 104 aa5.33□□□□□ -1.56
ACTN1-213ENST00000554508 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
ACTN1-213ENST00000554508 MYMXA0A1B0GTQ4 84 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 HERV-K104P63124 156 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 LBHQ53QV2 105 aaPredicted RBP5.32□□□□□ -1.56
ACTN1-213ENST00000554508 PYY3Q5JQD4 70 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 MEIG1Q5JSS6 88 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 ERG28Q9UKR5 140 aa5.32□□□□□ -1.56
ACTN1-213ENST00000554508 A0A0U1RRA0 63 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 NMUP48645 174 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 LINC00158P58513 81 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 COX17Q14061 63 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 XAGE1AQ9HD64 81 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 TP73-AS1Q9UF72 201 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 C22orf24Q9Y442 160 aa5.31□□□□□ -1.56
ACTN1-213ENST00000554508 IGKV2D-26A0A0A0MRZ7 120 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 H0Y9J4 135 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 ANKRD39Q53RE8 183 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 LINC00518Q8N0U6 118 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 PAM16Q9Y3D7 125 aa5.3□□□□□ -1.56
ACTN1-213ENST00000554508 LINC00587B1AMM8 73 aa5.29□□□□□ -1.56
ACTN1-213ENST00000554508 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
ACTN1-213ENST00000554508 A0A0J9YXY3 114 aa5.28□□□□□ -1.56
ACTN1-213ENST00000554508 ZNF815PA8K554 130 aa5.28□□□□□ -1.56
ACTN1-213ENST00000554508 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
ACTN1-213ENST00000554508 TTTY13Q9BZ97 58 aa5.28□□□□□ -1.56
ACTN1-213ENST00000554508 SND1-IT1Q9HBX3 110 aa5.28□□□□□ -1.56
ACTN1-213ENST00000554508 IGLV1-50A0A075B6I6 118 aa5.27□□□□□ -1.57
ACTN1-213ENST00000554508 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
ACTN1-213ENST00000554508 ZNF861PO60384 105 aa5.27□□□□□ -1.57
ACTN1-213ENST00000554508 MIR7-3HGQ8N6C7 128 aa5.27□□□□□ -1.57
ACTN1-213ENST00000554508 SCGB1D4Q6XE38 83 aa5.26□□□□□ -1.57
ACTN1-213ENST00000554508 PCP2Q8IVA1 136 aa5.26□□□□□ -1.57
ACTN1-213ENST00000554508 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
ACTN1-213ENST00000554508 DAND5Q8N907 189 aa5.26□□□□□ -1.57
ACTN1-213ENST00000554508 LINC00167Q96N53 147 aa5.26□□□□□ -1.57
ACTN1-213ENST00000554508 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
ACTN1-213ENST00000554508 BCE1O60756 84 aa5.25□□□□□ -1.57
ACTN1-213ENST00000554508 KRTAP1-4P0C5Y4 121 aa5.25□□□□□ -1.57
ACTN1-213ENST00000554508 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
ACTN1-213ENST00000554508 NKAPP1Q8N9T2 125 aa5.25□□□□□ -1.57
ACTN1-213ENST00000554508 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
ACTN1-213ENST00000554508 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
ACTN1-213ENST00000554508 NPC2P61916 151 aa5.24□□□□□ -1.57
ACTN1-213ENST00000554508 RPL24P83731 157 aaKnown RBP5.24□□□□□ -1.57
ACTN1-213ENST00000554508 BOD1L2Q8IYS8 172 aa5.24□□□□□ -1.57
ACTN1-213ENST00000554508 MIEN1Q9BRT3 115 aa5.24□□□□□ -1.57
ACTN1-213ENST00000554508 UQCR10Q9UDW1 63 aa5.24□□□□□ -1.57
ACTN1-213ENST00000554508 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
ACTN1-213ENST00000554508 LRP2P98164 4655 aa5.23□□□□□ -1.57
ACTN1-213ENST00000554508 GAGE10A6NGK3 116 aa5.23□□□□□ -1.57
ACTN1-213ENST00000554508 RPL37AP8A6NKH3 93 aa5.23□□□□□ -1.57
ACTN1-213ENST00000554508 ADAMTSL4-AS1Q5T5F5 129 aa5.23□□□□□ -1.57
ACTN1-213ENST00000554508 SLC25A34Q6PIV7 304 aa5.23□□□□□ -1.57
ACTN1-213ENST00000554508 TMEM238C9JI98 176 aa5.22□□□□□ -1.57
ACTN1-213ENST00000554508 TIMM17BO60830 172 aa5.22□□□□□ -1.57
ACTN1-213ENST00000554508 VPREB1P12018 145 aa5.22□□□□□ -1.57
ACTN1-213ENST00000554508 C14orf144Q96I85 54 aa5.22□□□□□ -1.57
ACTN1-213ENST00000554508 LITAFQ99732 161 aa5.22□□□□□ -1.57
ACTN1-213ENST00000554508 NCR3O14931 201 aa5.21□□□□□ -1.58
ACTN1-213ENST00000554508 COX8AP10176 69 aa5.21□□□□□ -1.58
ACTN1-213ENST00000554508 Q8NDZ9 215 aa5.21□□□□□ -1.58
ACTN1-213ENST00000554508 LOC107984156A0A0G2JMH3 177 aa5.2□□□□□ -1.58
ACTN1-213ENST00000554508 UBE2AP49459 152 aa5.2□□□□□ -1.58
ACTN1-213ENST00000554508 SOSTDC1Q6X4U4 206 aa5.2□□□□□ -1.58
ACTN1-213ENST00000554508 ARL17AQ8IVW1 177 aa5.2□□□□□ -1.58
ACTN1-213ENST00000554508 LINC00308Q8TCZ7 52 aa5.2□□□□□ -1.58
ACTN1-213ENST00000554508 IGKV2-28A0A075B6P5 120 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 M0R378 163 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 EIF4EBP3O60516 100 aaPredicted RBP5.19□□□□□ -1.58
ACTN1-213ENST00000554508 IGKV2D-28P01615 120 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 DDTP30046 118 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
ACTN1-213ENST00000554508 KRTAP13-1Q8IUC0 172 aa5.19□□□□□ -1.58
ACTN1-213ENST00000554508 SPANXDQ9BXN6 97 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms