RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NANOS2P60321 138 aaKnown RBP8.01□□□□□ -1.13
SHMT2-212ENST00000554467 TMEM258P61165 79 aa8.01□□□□□ -1.13
SHMT2-212ENST00000554467 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
SHMT2-212ENST00000554467 COX7B2Q8TF08 81 aa8□□□□□ -1.13
SHMT2-212ENST00000554467 TIMM17BO60830 172 aa7.99□□□□□ -1.13
SHMT2-212ENST00000554467 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
SHMT2-212ENST00000554467 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
SHMT2-212ENST00000554467 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
SHMT2-212ENST00000554467 HUWE1Q7Z6Z7 4374 aaKnown RBP7.98□□□□□ -1.13
SHMT2-212ENST00000554467 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
SHMT2-212ENST00000554467 CRPP02741 224 aa7.98□□□□□ -1.13
SHMT2-212ENST00000554467 SS18Q15532 418 aa7.97□□□□□ -1.13
SHMT2-212ENST00000554467 A0A087WZ39 114 aa7.97□□□□□ -1.13
SHMT2-212ENST00000554467 REG3AQ06141 175 aa7.97□□□□□ -1.13
SHMT2-212ENST00000554467 KPRPQ5T749 579 aaPredicted RBP7.97□□□□□ -1.13
SHMT2-212ENST00000554467 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
SHMT2-212ENST00000554467 KLK12Q9UKR0 248 aa7.97□□□□□ -1.13
SHMT2-212ENST00000554467 MALP21145 153 aa7.96□□□□□ -1.13
SHMT2-212ENST00000554467 MDFIQ99750 246 aa7.96□□□□□ -1.13
SHMT2-212ENST00000554467 C6orf226Q5I0X4 101 aa7.96□□□□□ -1.14
SHMT2-212ENST00000554467 CHCHD10Q8WYQ3 142 aaPredicted RBP7.96□□□□□ -1.14
SHMT2-212ENST00000554467 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.14
SHMT2-212ENST00000554467 LYPD5Q6UWN5 251 aa7.96□□□□□ -1.14
SHMT2-212ENST00000554467 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
SHMT2-212ENST00000554467 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
SHMT2-212ENST00000554467 K7EIL1 84 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 LELP1Q5T871 98 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 DNAL4O96015 105 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 C11orf45Q8TAV5 145 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 LYSTQ99698 3801 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 A0A087WYN8 130 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 INAFM2P0DMQ5 153 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
SHMT2-212ENST00000554467 DEFB131BA0A096LNP1 70 aa7.93□□□□□ -1.14
SHMT2-212ENST00000554467 Q6JHZ5 121 aa7.93□□□□□ -1.14
SHMT2-212ENST00000554467 SLPIP03973 132 aa7.92□□□□□ -1.14
SHMT2-212ENST00000554467 OBSCN-AS1Q96MR7 158 aa7.92□□□□□ -1.14
SHMT2-212ENST00000554467 LINC00336Q6ZUF6 198 aa7.92□□□□□ -1.14
SHMT2-212ENST00000554467 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
SHMT2-212ENST00000554467 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
SHMT2-212ENST00000554467 ESRGQ1W209 222 aa7.91□□□□□ -1.14
SHMT2-212ENST00000554467 CCL18P55774 89 aa7.91□□□□□ -1.14
SHMT2-212ENST00000554467 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
SHMT2-212ENST00000554467 C6orf223Q8N319 242 aa7.91□□□□□ -1.14
SHMT2-212ENST00000554467 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
SHMT2-212ENST00000554467 ENHOQ6UWT2 76 aa7.9□□□□□ -1.14
SHMT2-212ENST00000554467 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
SHMT2-212ENST00000554467 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
SHMT2-212ENST00000554467 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
SHMT2-212ENST00000554467 NCR3O14931 201 aa7.89□□□□□ -1.15
SHMT2-212ENST00000554467 LECT2O14960 151 aa7.89□□□□□ -1.15
SHMT2-212ENST00000554467 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
SHMT2-212ENST00000554467 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
SHMT2-212ENST00000554467 KIAA0087Q14695 138 aa7.87□□□□□ -1.15
SHMT2-212ENST00000554467 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
SHMT2-212ENST00000554467 Q8IZM0 81 aa7.87□□□□□ -1.15
SHMT2-212ENST00000554467 DNAH9Q9NYC9 4486 aa7.87□□□□□ -1.15
SHMT2-212ENST00000554467 FAM19A1Q7Z5A9 133 aa7.86□□□□□ -1.15
SHMT2-212ENST00000554467 TRAV23DV6A0A075B6W5 121 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 PRR34Q9NV39 138 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 IBA57-AS1B1ANH7 110 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 GHRHP01286 108 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 TM2D3Q9BRN9 247 aa7.85□□□□□ -1.15
SHMT2-212ENST00000554467 SPAG11BQ08648 103 aa7.84□□□□□ -1.15
SHMT2-212ENST00000554467 HIGD2BQ4VC39 106 aa7.84□□□□□ -1.15
SHMT2-212ENST00000554467 PRO0628Q9UI54 55 aa7.84□□□□□ -1.15
SHMT2-212ENST00000554467 DNHD1Q96M86 4753 aa7.84□□□□□ -1.15
SHMT2-212ENST00000554467 C20orf197Q8N268 126 aa7.84□□□□□ -1.16
SHMT2-212ENST00000554467 CSMD3Q7Z407 3707 aa7.83□□□□□ -1.16
SHMT2-212ENST00000554467 MEGF8Q7Z7M0 2845 aa7.83□□□□□ -1.16
SHMT2-212ENST00000554467 H3BNG1 76 aa7.82□□□□□ -1.16
SHMT2-212ENST00000554467 H7BZZ5 65 aa7.82□□□□□ -1.16
SHMT2-212ENST00000554467 FP248Q71RG6 208 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-212ENST00000554467 NDUFC2O95298 119 aa7.82□□□□□ -1.16
SHMT2-212ENST00000554467 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
SHMT2-212ENST00000554467 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
SHMT2-212ENST00000554467 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 TRAV10A0A0B4J240 114 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 FAM236DA0A1B0GTK5 79 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 CCKP06307 115 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 FAM236CP0DP71 79 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 Q8NDZ9 215 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 PKIGQ9Y2B9 76 aa7.8□□□□□ -1.16
SHMT2-212ENST00000554467 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
SHMT2-212ENST00000554467 C1orf43Q9BWL3 253 aa7.79□□□□□ -1.16
SHMT2-212ENST00000554467 LINC00588Q9Y4M8 146 aa7.79□□□□□ -1.16
SHMT2-212ENST00000554467 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
SHMT2-212ENST00000554467 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
SHMT2-212ENST00000554467 XAGE1AQ9HD64 81 aa7.78□□□□□ -1.16
SHMT2-212ENST00000554467 SERP1Q9Y6X1 66 aa7.78□□□□□ -1.16
SHMT2-212ENST00000554467 H0YGX0 51 aa7.77□□□□□ -1.17
SHMT2-212ENST00000554467 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
SHMT2-212ENST00000554467 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.17
SHMT2-212ENST00000554467 ORMDL1Q9P0S3 153 aa7.77□□□□□ -1.17
SHMT2-212ENST00000554467 LINC01556Q5JQF7 62 aa7.76□□□□□ -1.17
SHMT2-212ENST00000554467 C6orf48Q9UBA6 75 aa7.76□□□□□ -1.17
SHMT2-212ENST00000554467 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
SHMT2-212ENST00000554467 F8WDY8 70 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms