RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
SHMT2-209ENST00000553949 ADAMTSL4-AS1Q5T5F5 129 aa7.7□□□□□ -1.18
SHMT2-209ENST00000553949 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
SHMT2-209ENST00000553949 HERC2O95714 4834 aa7.7□□□□□ -1.18
SHMT2-209ENST00000553949 COX8AP10176 69 aa7.69□□□□□ -1.18
SHMT2-209ENST00000553949 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
SHMT2-209ENST00000553949 SMR3BP02814 79 aaPredicted RBP7.68□□□□□ -1.18
SHMT2-209ENST00000553949 BOD1L2Q8IYS8 172 aa7.68□□□□□ -1.18
SHMT2-209ENST00000553949 C14orf144Q96I85 54 aa7.68□□□□□ -1.18
SHMT2-209ENST00000553949 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
SHMT2-209ENST00000553949 TMEM238C9JI98 176 aa7.67□□□□□ -1.18
SHMT2-209ENST00000553949 M0QXV9 152 aa7.67□□□□□ -1.18
SHMT2-209ENST00000553949 DLEU1O43261 78 aa7.67□□□□□ -1.18
SHMT2-209ENST00000553949 PHF5AQ7RTV0 110 aaKnown RBP7.67□□□□□ -1.18
SHMT2-209ENST00000553949 C22orf24Q9Y442 160 aa7.67□□□□□ -1.18
SHMT2-209ENST00000553949 IGLV5-37A0A075B6J1 123 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 VPREB1P12018 145 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 NPC2P61916 151 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
SHMT2-209ENST00000553949 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 Q8NDZ9 215 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 MIEN1Q9BRT3 115 aa7.66□□□□□ -1.18
SHMT2-209ENST00000553949 EIF4EBP3O60516 100 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-209ENST00000553949 SMIM6P0DI80 62 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 S100A12P80511 92 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 SOSTDC1Q6X4U4 206 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 NKAPP1Q8N9T2 125 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 LINC00308Q8TCZ7 52 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 SPANXDQ9BXN6 97 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
SHMT2-209ENST00000553949 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-209ENST00000553949 SLC25A34Q6PIV7 304 aa7.64□□□□□ -1.19
SHMT2-209ENST00000553949 Q6ZVH6 145 aa7.64□□□□□ -1.19
SHMT2-209ENST00000553949 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
SHMT2-209ENST00000553949 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
SHMT2-209ENST00000553949 SPANXB1Q9NS25 103 aaPredicted RBP7.63□□□□□ -1.19
SHMT2-209ENST00000553949 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
SHMT2-209ENST00000553949 PRR3P79522 188 aaKnown RBP7.62□□□□□ -1.19
SHMT2-209ENST00000553949 Q8N1X5 172 aa7.62□□□□□ -1.19
SHMT2-209ENST00000553949 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
SHMT2-209ENST00000553949 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 NCR3O14931 201 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 NDUFC2O95298 119 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 IFITM1P13164 125 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 UBE2BP63146 152 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 SRSF9Q13242 221 aaKnown RBP eCLIP7.61□□□□□ -1.19
SHMT2-209ENST00000553949 Q5VSD8 79 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
SHMT2-209ENST00000553949 RPL37AP8A6NKH3 93 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 M0R378 163 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
SHMT2-209ENST00000553949 C2orf91Q6ZV80 131 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 MUSTN1Q8IVN3 82 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 HIGD1BQ9P298 99 aa7.6□□□□□ -1.19
SHMT2-209ENST00000553949 PSORS1C2Q9UIG4 136 aa7.59□□□□□ -1.19
SHMT2-209ENST00000553949 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
SHMT2-209ENST00000553949 PLA2G1BP04054 148 aaKnown RBP7.58□□□□□ -1.2
SHMT2-209ENST00000553949 HIST1H4GQ99525 98 aa7.58□□□□□ -1.2
SHMT2-209ENST00000553949 UQCR10Q9UDW1 63 aa7.58□□□□□ -1.2
SHMT2-209ENST00000553949 IGLV1-50A0A075B6I6 118 aa7.57□□□□□ -1.2
SHMT2-209ENST00000553949 IGKV2-28A0A075B6P5 120 aa7.57□□□□□ -1.2
SHMT2-209ENST00000553949 IGKV2D-28P01615 120 aa7.57□□□□□ -1.2
SHMT2-209ENST00000553949 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
SHMT2-209ENST00000553949 C12orf57Q99622 126 aa7.56□□□□□ -1.2
SHMT2-209ENST00000553949 PRO1933Q9H354 126 aa7.56□□□□□ -1.2
SHMT2-209ENST00000553949 TRBV10-3A0A0K0K1G6 114 aa7.55□□□□□ -1.2
SHMT2-209ENST00000553949 C1orf137Q5JT78 98 aa7.55□□□□□ -1.2
SHMT2-209ENST00000553949 LINC00518Q8N0U6 118 aa7.55□□□□□ -1.2
SHMT2-209ENST00000553949 DDTP30046 118 aa7.54□□□□□ -1.2
SHMT2-209ENST00000553949 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
SHMT2-209ENST00000553949 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
SHMT2-209ENST00000553949 A4D1N5 150 aa7.53□□□□□ -1.2
SHMT2-209ENST00000553949 IGLV6-57P01721 117 aa7.53□□□□□ -1.2
SHMT2-209ENST00000553949 TAL2Q16559 108 aa7.53□□□□□ -1.2
SHMT2-209ENST00000553949 LINC00337Q8N6G1 96 aa7.53□□□□□ -1.2
SHMT2-209ENST00000553949 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
SHMT2-209ENST00000553949 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 PRYO14603 147 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 BCE1O60756 84 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 HNRNPA3P51991 378 aaKnown RBP7.52□□□□□ -1.21
SHMT2-209ENST00000553949 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 CEND1Q8N111 149 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 TMEM126AQ9H061 195 aa7.52□□□□□ -1.21
SHMT2-209ENST00000553949 IGLV7-43P04211 117 aa7.51□□□□□ -1.21
SHMT2-209ENST00000553949 A6NDN8 102 aa7.5□□□□□ -1.21
SHMT2-209ENST00000553949 HSD52Q0P140 79 aa7.5□□□□□ -1.21
SHMT2-209ENST00000553949 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
SHMT2-209ENST00000553949 TRAV23DV6A0A075B6W5 121 aa7.49□□□□□ -1.21
SHMT2-209ENST00000553949 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
SHMT2-209ENST00000553949 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
SHMT2-209ENST00000553949 SPRR1AP35321 89 aa7.49□□□□□ -1.21
SHMT2-209ENST00000553949 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
SHMT2-209ENST00000553949 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms