RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
PSEN1-208ENST00000553719 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
PSEN1-208ENST00000553719 S100A12P80511 92 aa11.37□□□□□ -0.59
PSEN1-208ENST00000553719 LOC107984156A0A0G2JMH3 177 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 DLEU1O43261 78 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 SMIM6P0DI80 62 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 ARL17AQ8IVW1 177 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 DAND5Q8N907 189 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 PLA2G2DQ9UNK4 145 aa11.36□□□□□ -0.59
PSEN1-208ENST00000553719 SERTAD4-AS1Q5TG53 156 aa11.35□□□□□ -0.59
PSEN1-208ENST00000553719 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
PSEN1-208ENST00000553719 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
PSEN1-208ENST00000553719 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
PSEN1-208ENST00000553719 Q8NDZ9 215 aa11.34□□□□□ -0.59
PSEN1-208ENST00000553719 C14orf144Q96I85 54 aa11.33□□□□□ -0.6
PSEN1-208ENST00000553719 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
PSEN1-208ENST00000553719 EIF4EBP3O60516 100 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-208ENST00000553719 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
PSEN1-208ENST00000553719 SPANXDQ9BXN6 97 aa11.32□□□□□ -0.6
PSEN1-208ENST00000553719 SPANXCQ9NY87 97 aa11.32□□□□□ -0.6
PSEN1-208ENST00000553719 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
PSEN1-208ENST00000553719 VPREB1P12018 145 aa11.31□□□□□ -0.6
PSEN1-208ENST00000553719 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-208ENST00000553719 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
PSEN1-208ENST00000553719 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
PSEN1-208ENST00000553719 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
PSEN1-208ENST00000553719 M0QXV9 152 aa11.28□□□□□ -0.6
PSEN1-208ENST00000553719 C2orf91Q6ZV80 131 aa11.28□□□□□ -0.6
PSEN1-208ENST00000553719 Q6ZVH6 145 aa11.28□□□□□ -0.6
PSEN1-208ENST00000553719 KRTAP17-1Q9BYP8 105 aa11.28□□□□□ -0.6
PSEN1-208ENST00000553719 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
PSEN1-208ENST00000553719 HIGD1BQ9P298 99 aa11.27□□□□□ -0.61
PSEN1-208ENST00000553719 C22orf24Q9Y442 160 aa11.27□□□□□ -0.61
PSEN1-208ENST00000553719 NPC2P61916 151 aa11.26□□□□□ -0.61
PSEN1-208ENST00000553719 PHF5AQ7RTV0 110 aaKnown RBP11.26□□□□□ -0.61
PSEN1-208ENST00000553719 RPL24P83731 157 aaKnown RBP11.25□□□□□ -0.61
PSEN1-208ENST00000553719 NDUFC2O95298 119 aa11.24□□□□□ -0.61
PSEN1-208ENST00000553719 IFITM1P13164 125 aa11.24□□□□□ -0.61
PSEN1-208ENST00000553719 MIEN1Q9BRT3 115 aa11.24□□□□□ -0.61
PSEN1-208ENST00000553719 SMR3BP02814 79 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-208ENST00000553719 MRPL55Q7Z7F7 128 aaKnown RBP11.23□□□□□ -0.61
PSEN1-208ENST00000553719 KRTAP11-1Q8IUC1 163 aa11.23□□□□□ -0.61
PSEN1-208ENST00000553719 C12orf57Q99622 126 aa11.23□□□□□ -0.61
PSEN1-208ENST00000553719 LINC00528Q8N1L1 170 aa11.22□□□□□ -0.61
PSEN1-208ENST00000553719 C7orf33Q8WU49 177 aa11.22□□□□□ -0.61
PSEN1-208ENST00000553719 PRR3P79522 188 aaKnown RBP11.21□□□□□ -0.61
PSEN1-208ENST00000553719 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.61
PSEN1-208ENST00000553719 MUSTN1Q8IVN3 82 aa11.21□□□□□ -0.61
PSEN1-208ENST00000553719 NKAPP1Q8N9T2 125 aa11.21□□□□□ -0.61
PSEN1-208ENST00000553719 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
PSEN1-208ENST00000553719 PRO1933Q9H354 126 aa11.21□□□□□ -0.61
PSEN1-208ENST00000553719 UQCR10Q9UDW1 63 aa11.21□□□□□ -0.61
PSEN1-208ENST00000553719 PKHD1L1Q86WI1 4243 aa11.19□□□□□ -0.62
PSEN1-208ENST00000553719 TRBV10-2A0A0K0K1G8 114 aa11.19□□□□□ -0.62
PSEN1-208ENST00000553719 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-208ENST00000553719 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-208ENST00000553719 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
PSEN1-208ENST00000553719 Q8N1X5 172 aa11.19□□□□□ -0.62
PSEN1-208ENST00000553719 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
PSEN1-208ENST00000553719 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
PSEN1-208ENST00000553719 M0R378 163 aa11.18□□□□□ -0.62
PSEN1-208ENST00000553719 NCR3O14931 201 aa11.18□□□□□ -0.62
PSEN1-208ENST00000553719 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
PSEN1-208ENST00000553719 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
PSEN1-208ENST00000553719 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
PSEN1-208ENST00000553719 GAGE10A6NGK3 116 aa11.16□□□□□ -0.62
PSEN1-208ENST00000553719 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
PSEN1-208ENST00000553719 RPL37AP8A6NKH3 93 aa11.14□□□□□ -0.63
PSEN1-208ENST00000553719 UBE2BP63146 152 aa11.14□□□□□ -0.63
PSEN1-208ENST00000553719 TAL2Q16559 108 aa11.14□□□□□ -0.63
PSEN1-208ENST00000553719 Q5VSD8 79 aa11.14□□□□□ -0.63
PSEN1-208ENST00000553719 SRRM2Q9UQ35 2752 aaKnown RBP11.13□□□□□ -0.63
PSEN1-208ENST00000553719 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
PSEN1-208ENST00000553719 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
PSEN1-208ENST00000553719 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
PSEN1-208ENST00000553719 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
PSEN1-208ENST00000553719 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
PSEN1-208ENST00000553719 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
PSEN1-208ENST00000553719 A4D1N5 150 aa11.12□□□□□ -0.63
PSEN1-208ENST00000553719 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
PSEN1-208ENST00000553719 FAM229AH3BQW9 127 aa11.1□□□□□ -0.63
PSEN1-208ENST00000553719 DDTP30046 118 aa11.1□□□□□ -0.63
PSEN1-208ENST00000553719 HSD52Q0P140 79 aa11.1□□□□□ -0.63
PSEN1-208ENST00000553719 CEND1Q8N111 149 aa11.1□□□□□ -0.63
PSEN1-208ENST00000553719 KCNQ1DNQ9H478 68 aa11.1□□□□□ -0.63
PSEN1-208ENST00000553719 PLA2G1BP04054 148 aaKnown RBP11.08□□□□□ -0.64
PSEN1-208ENST00000553719 TMEM126AQ9H061 195 aa11.08□□□□□ -0.64
PSEN1-208ENST00000553719 PRYO14603 147 aa11.07□□□□□ -0.64
PSEN1-208ENST00000553719 SPRR1AP35321 89 aa11.07□□□□□ -0.64
PSEN1-208ENST00000553719 KRTAP4-5Q9BYR2 181 aa11.07□□□□□ -0.64
PSEN1-208ENST00000553719 FXYD2P54710 66 aa11.06□□□□□ -0.64
PSEN1-208ENST00000553719 C1orf137Q5JT78 98 aa11.06□□□□□ -0.64
PSEN1-208ENST00000553719 S100A7L2Q5SY68 101 aa11.06□□□□□ -0.64
PSEN1-208ENST00000553719 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-208ENST00000553719 BCE1O60756 84 aa11.05□□□□□ -0.64
PSEN1-208ENST00000553719 REG3GQ6UW15 175 aa11.05□□□□□ -0.64
PSEN1-208ENST00000553719 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
PSEN1-208ENST00000553719 KRTAP13-1Q8IUC0 172 aa11.04□□□□□ -0.64
PSEN1-208ENST00000553719 TRAV23DV6A0A075B6W5 121 aa11.03□□□□□ -0.64
PSEN1-208ENST00000553719 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms