RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 FAT1Q14517 4588 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 RPL24P83731 157 aaKnown RBP8.65□□□□□ -1.02
TUBB3-202ENST00000553656 MIR7-3HGQ8N6C7 128 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
TUBB3-202ENST00000553656 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
TUBB3-202ENST00000553656 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
TUBB3-202ENST00000553656 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 MRPL55Q7Z7F7 128 aaKnown RBP8.63□□□□□ -1.03
TUBB3-202ENST00000553656 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
TUBB3-202ENST00000553656 INAFM2P0DMQ5 153 aa8.62□□□□□ -1.03
TUBB3-202ENST00000553656 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
TUBB3-202ENST00000553656 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
TUBB3-202ENST00000553656 VPREB1P12018 145 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 BOD1L2Q8IYS8 172 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 DAND5Q8N907 189 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 PSORS1C2Q9UIG4 136 aa8.6□□□□□ -1.03
TUBB3-202ENST00000553656 GAGE10A6NGK3 116 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 TIMM17BO60830 172 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
TUBB3-202ENST00000553656 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
TUBB3-202ENST00000553656 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
TUBB3-202ENST00000553656 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
TUBB3-202ENST00000553656 RPL37AP8A6NKH3 93 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 JOSD1Q15040 202 aaPredicted RBP8.56□□□□□ -1.04
TUBB3-202ENST00000553656 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
TUBB3-202ENST00000553656 M0R378 163 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 NCR3O14931 201 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 NPC2P61916 151 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
TUBB3-202ENST00000553656 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 Q8NDZ9 215 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 LITAFQ99732 161 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
TUBB3-202ENST00000553656 NDUFC2O95298 119 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 HNRNPA3P51991 378 aaKnown RBP8.52□□□□□ -1.05
TUBB3-202ENST00000553656 S100A12P80511 92 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 LINC00308Q8TCZ7 52 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
TUBB3-202ENST00000553656 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 PAM16Q9Y3D7 125 aa8.52□□□□□ -1.05
TUBB3-202ENST00000553656 VPS13BQ7Z7G8 4022 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 TRBV10-2A0A0K0K1G8 114 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SPINK6Q6UWN8 80 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 Q6ZVH6 145 aa8.51□□□□□ -1.05
TUBB3-202ENST00000553656 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
TUBB3-202ENST00000553656 ABCA13Q86UQ4 5058 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 BCE1O60756 84 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
TUBB3-202ENST00000553656 COX8AP10176 69 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 IFITM1P13164 125 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
TUBB3-202ENST00000553656 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
TUBB3-202ENST00000553656 UBE2AP49459 152 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 SRSF9Q13242 221 aaKnown RBP eCLIP8.48□□□□□ -1.05
TUBB3-202ENST00000553656 PYY3Q5JQD4 70 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
TUBB3-202ENST00000553656 TRBV10-3A0A0K0K1G6 114 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 PRYO14603 147 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
TUBB3-202ENST00000553656 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 DDTP30046 118 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
TUBB3-202ENST00000553656 DLEU1O43261 78 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 ZNF861PO60384 105 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 C14orf144Q96I85 54 aa8.46□□□□□ -1.06
TUBB3-202ENST00000553656 PCLOQ9Y6V0 5065 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 OR13C6PQ8NH95 151 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 PPDPFQ9H3Y8 114 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
TUBB3-202ENST00000553656 SLC25A34Q6PIV7 304 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
TUBB3-202ENST00000553656 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
TUBB3-202ENST00000553656 H0Y9J4 135 aa8.43□□□□□ -1.06
TUBB3-202ENST00000553656 OXTP01178 125 aa8.43□□□□□ -1.06
TUBB3-202ENST00000553656 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 J3QL48 77 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 IGLV6-57P01721 117 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 PRLHP81277 87 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 HIST1H4GQ99525 98 aa8.42□□□□□ -1.06
TUBB3-202ENST00000553656 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
TUBB3-202ENST00000553656 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms