RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PTTG1IPP53801 180 aa4.85□□□□□ -1.63
NPAS3-213ENST00000552874 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
NPAS3-213ENST00000552874 PLAC8Q9NZF1 115 aa4.85□□□□□ -1.63
NPAS3-213ENST00000552874 LOC107984640A0A0U1RRK4 108 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 H0Y8G0 127 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 DPM2O94777 84 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 TMEM170BQ5T4T1 132 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 PET117Q6UWS5 81 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 MAP1LC3CQ9BXW4 147 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 TOMM7Q9P0U1 55 aa4.84□□□□□ -1.63
NPAS3-213ENST00000552874 A0A087WYN8 130 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 IGKCP01834 107 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
NPAS3-213ENST00000552874 Q8N1X5 172 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 HERC1Q15751 4861 aa4.83□□□□□ -1.64
NPAS3-213ENST00000552874 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
NPAS3-213ENST00000552874 A0A1W2PNN7 141 aa4.82□□□□□ -1.64
NPAS3-213ENST00000552874 PRSS2P07478 247 aa4.82□□□□□ -1.64
NPAS3-213ENST00000552874 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
NPAS3-213ENST00000552874 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 FAM168BA1KXE4 195 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 E9PLD3 99 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 LEPROTO15243 131 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 KRTDAPP60985 99 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
NPAS3-213ENST00000552874 C6orf226Q5I0X4 101 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 Q8NDZ9 215 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 CDIP1Q9H305 208 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 PKIGQ9Y2B9 76 aa4.81□□□□□ -1.64
NPAS3-213ENST00000552874 CKS1BP61024 79 aa4.8□□□□□ -1.64
NPAS3-213ENST00000552874 MIEN1Q9BRT3 115 aa4.8□□□□□ -1.64
NPAS3-213ENST00000552874 C20orf202A1L168 122 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 J3QQQ9 107 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
NPAS3-213ENST00000552874 GAGE2BQ13066 116 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 SERTAD4-AS1Q5TG53 156 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 Q5VSD8 79 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 SFTA2Q6UW10 78 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 STPG4Q8N801 248 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 LINC00474Q9P2X8 69 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 ERG28Q9UKR5 140 aa4.79□□□□□ -1.64
NPAS3-213ENST00000552874 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 ATOH7Q8N100 152 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 LITAFQ99732 161 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 TTTY13Q9BZ97 58 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 NDUFA12Q9UI09 145 aa4.78□□□□□ -1.64
NPAS3-213ENST00000552874 NMUP48645 174 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
NPAS3-213ENST00000552874 COX17Q14061 63 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 PLA2G2DQ9UNK4 145 aa4.77□□□□□ -1.65
NPAS3-213ENST00000552874 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
NPAS3-213ENST00000552874 LOC107984156A0A0G2JMH3 177 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 SCGB1A1P11684 91 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 VPREB1P12018 145 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 HERVK_113P61574 105 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 HERV-K104P63124 156 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
NPAS3-213ENST00000552874 ARL17AQ8IVW1 177 aa4.76□□□□□ -1.65
NPAS3-213ENST00000552874 A0A0J9YXY3 114 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 MYMXA0A1B0GTQ4 84 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 H3BS24 57 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 M0QXV9 152 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 SMIM13P0DJ93 91 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 PFN2P35080 140 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 PRR3P79522 188 aaKnown RBP4.75□□□□□ -1.65
NPAS3-213ENST00000552874 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
NPAS3-213ENST00000552874 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
NPAS3-213ENST00000552874 LGALS3P17931 250 aaKnown RBP4.74□□□□□ -1.65
NPAS3-213ENST00000552874 OCIAD2Q56VL3 154 aa4.74□□□□□ -1.65
NPAS3-213ENST00000552874 SOSTDC1Q6X4U4 206 aa4.74□□□□□ -1.65
NPAS3-213ENST00000552874 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
NPAS3-213ENST00000552874 MIR7-3HGQ8N6C7 128 aa4.74□□□□□ -1.65
NPAS3-213ENST00000552874 K7ERU9 68 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 TIMM17BO60830 172 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 RPL37AP61513 92 aaKnown RBP4.73□□□□□ -1.65
NPAS3-213ENST00000552874 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 DAND5Q8N907 189 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 VPS25Q9BRG1 176 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 PSORS1C2Q9UIG4 136 aa4.73□□□□□ -1.65
NPAS3-213ENST00000552874 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
NPAS3-213ENST00000552874 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
NPAS3-213ENST00000552874 C7orf33Q8WU49 177 aa4.72□□□□□ -1.65
NPAS3-213ENST00000552874 C22orf24Q9Y442 160 aa4.72□□□□□ -1.65
NPAS3-213ENST00000552874 A0A0U1RRA0 63 aa4.71□□□□□ -1.66
NPAS3-213ENST00000552874 SCGB1D1O95968 90 aa4.71□□□□□ -1.66
NPAS3-213ENST00000552874 LINC00158P58513 81 aa4.71□□□□□ -1.66
NPAS3-213ENST00000552874 MEIG1Q5JSS6 88 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms