RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 DNAH10OSP0CZ25 163 aa7□□□□□ -1.29
RFX4-210ENST00000552773 NDUFV3P56181 108 aaKnown RBP7□□□□□ -1.29
RFX4-210ENST00000552773 C6orf99Q4VX62 202 aa7□□□□□ -1.29
RFX4-210ENST00000552773 LINC00575Q6W349 94 aa7□□□□□ -1.29
RFX4-210ENST00000552773 WFDC10BQ8IUB3 73 aa7□□□□□ -1.29
RFX4-210ENST00000552773 DIRC1Q969H9 104 aa7□□□□□ -1.29
RFX4-210ENST00000552773 NDUFC2-KCTD14E9PQ53 114 aa7□□□□□ -1.29
RFX4-210ENST00000552773 ESRGQ1W209 222 aa7□□□□□ -1.29
RFX4-210ENST00000552773 Q8N3U1 123 aa7□□□□□ -1.29
RFX4-210ENST00000552773 C6orf48Q9UBA6 75 aa7□□□□□ -1.29
RFX4-210ENST00000552773 TRAV23DV6A0A075B6W5 121 aa6.99□□□□□ -1.29
RFX4-210ENST00000552773 M0R378 163 aa6.99□□□□□ -1.29
RFX4-210ENST00000552773 NANOS2P60321 138 aaKnown RBP6.99□□□□□ -1.29
RFX4-210ENST00000552773 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
RFX4-210ENST00000552773 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
RFX4-210ENST00000552773 RETNQ9HD89 108 aa6.99□□□□□ -1.29
RFX4-210ENST00000552773 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
RFX4-210ENST00000552773 CCKP06307 115 aa6.98□□□□□ -1.29
RFX4-210ENST00000552773 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
RFX4-210ENST00000552773 C6orf223Q8N319 242 aa6.98□□□□□ -1.29
RFX4-210ENST00000552773 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
RFX4-210ENST00000552773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.97□□□□□ -1.29
RFX4-210ENST00000552773 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
RFX4-210ENST00000552773 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
RFX4-210ENST00000552773 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.29
RFX4-210ENST00000552773 TM2D3Q9BRN9 247 aa6.96□□□□□ -1.29
RFX4-210ENST00000552773 C14orf132Q9NPU4 83 aa6.96□□□□□ -1.29
RFX4-210ENST00000552773 TEP1Q99973 2627 aaKnown RBP6.96□□□□□ -1.3
RFX4-210ENST00000552773 COX7BP24311 80 aa6.96□□□□□ -1.3
RFX4-210ENST00000552773 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
RFX4-210ENST00000552773 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
RFX4-210ENST00000552773 Q6JHZ5 121 aa6.96□□□□□ -1.3
RFX4-210ENST00000552773 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
RFX4-210ENST00000552773 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
RFX4-210ENST00000552773 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
RFX4-210ENST00000552773 TLX1NBP0CAT3 122 aa6.94□□□□□ -1.3
RFX4-210ENST00000552773 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
RFX4-210ENST00000552773 UBL5Q9BZL1 73 aa6.94□□□□□ -1.3
RFX4-210ENST00000552773 HIVEP1P15822 2718 aa6.94□□□□□ -1.3
RFX4-210ENST00000552773 LOC110117498A0A087WWA1 95 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 UPK3BQ9BT76 320 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 LAMTOR3Q9UHA4 124 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 CUBNO60494 3623 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 SLPIP03973 132 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 VPREB1P12018 145 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
RFX4-210ENST00000552773 Q6ZRU5 148 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 MRAPQ8TCY5 172 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
RFX4-210ENST00000552773 LINC00526Q96FQ7 95 aa6.92□□□□□ -1.3
RFX4-210ENST00000552773 XAGE1AQ9HD64 81 aa6.92□□□□□ -1.3
RFX4-210ENST00000552773 ATRQ13535 2644 aa6.92□□□□□ -1.3
RFX4-210ENST00000552773 J3QL48 77 aa6.91□□□□□ -1.3
RFX4-210ENST00000552773 ATOX1O00244 68 aa6.91□□□□□ -1.3
RFX4-210ENST00000552773 TNP2Q05952 138 aa6.91□□□□□ -1.3
RFX4-210ENST00000552773 PKIGQ9Y2B9 76 aa6.91□□□□□ -1.3
RFX4-210ENST00000552773 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.31
RFX4-210ENST00000552773 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.31
RFX4-210ENST00000552773 SMCR5Q8TEV8 140 aa6.9□□□□□ -1.31
RFX4-210ENST00000552773 Q6ZQY7 126 aa6.89□□□□□ -1.31
RFX4-210ENST00000552773 KRTAP3-3Q9BYR6 98 aa6.89□□□□□ -1.31
RFX4-210ENST00000552773 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
RFX4-210ENST00000552773 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
RFX4-210ENST00000552773 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
RFX4-210ENST00000552773 F8P00451 2351 aa6.88□□□□□ -1.31
RFX4-210ENST00000552773 Q8NDZ9 215 aa6.88□□□□□ -1.31
RFX4-210ENST00000552773 LINC00588Q9Y4M8 146 aa6.88□□□□□ -1.31
RFX4-210ENST00000552773 KCNQ1DNQ9H478 68 aa6.87□□□□□ -1.31
RFX4-210ENST00000552773 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
RFX4-210ENST00000552773 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
RFX4-210ENST00000552773 NHLRC4P0CG21 123 aaPredicted RBP6.87□□□□□ -1.31
RFX4-210ENST00000552773 Q6ZQT0 140 aa6.87□□□□□ -1.31
RFX4-210ENST00000552773 A0A1B0GW54 56 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 K7EIL1 84 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 PRYO14603 147 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 UQCRQO14949 82 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 Q6ZRP5 223 aa6.86□□□□□ -1.31
RFX4-210ENST00000552773 LOC107984640A0A0U1RRK4 108 aa6.85□□□□□ -1.31
RFX4-210ENST00000552773 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
RFX4-210ENST00000552773 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
RFX4-210ENST00000552773 BCE1O60756 84 aa6.84□□□□□ -1.31
RFX4-210ENST00000552773 NBEAL2Q6ZNJ1 2754 aa6.84□□□□□ -1.31
RFX4-210ENST00000552773 HIST1H4AP62805 103 aaKnown RBP6.84□□□□□ -1.32
RFX4-210ENST00000552773 VWFP04275 2813 aa6.83□□□□□ -1.32
RFX4-210ENST00000552773 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
RFX4-210ENST00000552773 CXCL6P80162 114 aa6.82□□□□□ -1.32
RFX4-210ENST00000552773 SMIM20Q8N5G0 67 aa6.82□□□□□ -1.32
RFX4-210ENST00000552773 C3orf22Q8N5N4 141 aa6.82□□□□□ -1.32
RFX4-210ENST00000552773 TRBV7-4A0A0J9YYF1 115 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 ETDCA0A1B0GVM5 59 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 COX7CP15954 63 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 UBE2DNLQ8IWF7 75 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 IGKV3D-7A0A0C4DH55 119 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 B5MCH6 92 aa6.81□□□□□ -1.32
RFX4-210ENST00000552773 C7orf33Q8WU49 177 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms