RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 HERV-K104P63124 156 aa10.74□□□□□ -0.69
CDK4-208ENST00000551706 LINC00587B1AMM8 73 aa10.73□□□□□ -0.69
CDK4-208ENST00000551706 LEPROTO15243 131 aa10.73□□□□□ -0.69
CDK4-208ENST00000551706 HNRNPA3P51991 378 aaKnown RBP10.73□□□□□ -0.69
CDK4-208ENST00000551706 LBHQ53QV2 105 aaPredicted RBP10.73□□□□□ -0.69
CDK4-208ENST00000551706 LINC01545Q5VT33 79 aa10.73□□□□□ -0.69
CDK4-208ENST00000551706 TP73-AS1Q9UF72 201 aa10.73□□□□□ -0.69
CDK4-208ENST00000551706 NDUFA12Q9UI09 145 aa10.73□□□□□ -0.69
CDK4-208ENST00000551706 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
CDK4-208ENST00000551706 SCGB1D1O95968 90 aa10.72□□□□□ -0.69
CDK4-208ENST00000551706 UBE2BP63146 152 aa10.72□□□□□ -0.69
CDK4-208ENST00000551706 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
CDK4-208ENST00000551706 C22orf24Q9Y442 160 aa10.72□□□□□ -0.69
CDK4-208ENST00000551706 SND1-IT1Q9HBX3 110 aa10.71□□□□□ -0.69
CDK4-208ENST00000551706 J3QQQ9 107 aa10.7□□□□□ -0.7
CDK4-208ENST00000551706 NMUP48645 174 aa10.7□□□□□ -0.7
CDK4-208ENST00000551706 LINC00158P58513 81 aa10.7□□□□□ -0.7
CDK4-208ENST00000551706 JOSD1Q15040 202 aaPredicted RBP10.7□□□□□ -0.7
CDK4-208ENST00000551706 PKHD1L1Q86WI1 4243 aa10.7□□□□□ -0.7
CDK4-208ENST00000551706 LRP2P98164 4655 aa10.7□□□□□ -0.7
CDK4-208ENST00000551706 SMIM6P0DI80 62 aa10.69□□□□□ -0.7
CDK4-208ENST00000551706 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
CDK4-208ENST00000551706 MEIG1Q5JSS6 88 aa10.69□□□□□ -0.7
CDK4-208ENST00000551706 C1orf137Q5JT78 98 aa10.69□□□□□ -0.7
CDK4-208ENST00000551706 MRPL55Q7Z7F7 128 aaKnown RBP10.69□□□□□ -0.7
CDK4-208ENST00000551706 IGLV5-37A0A075B6J1 123 aa10.68□□□□□ -0.7
CDK4-208ENST00000551706 E9PLD3 99 aa10.68□□□□□ -0.7
CDK4-208ENST00000551706 TSPEAR-AS2P59090 65 aa10.68□□□□□ -0.7
CDK4-208ENST00000551706 RPL24P83731 157 aaKnown RBP10.67□□□□□ -0.7
CDK4-208ENST00000551706 SPINK6Q6UWN8 80 aa10.67□□□□□ -0.7
CDK4-208ENST00000551706 NKAPP1Q8N9T2 125 aa10.67□□□□□ -0.7
CDK4-208ENST00000551706 SMIM13P0DJ93 91 aa10.66□□□□□ -0.7
CDK4-208ENST00000551706 PYY3Q5JQD4 70 aa10.66□□□□□ -0.7
CDK4-208ENST00000551706 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
CDK4-208ENST00000551706 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDK4-208ENST00000551706 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.7
CDK4-208ENST00000551706 IGLV7-43P04211 117 aa10.63□□□□□ -0.71
CDK4-208ENST00000551706 VPREB1P12018 145 aa10.63□□□□□ -0.71
CDK4-208ENST00000551706 MIR7-3HGQ8N6C7 128 aa10.63□□□□□ -0.71
CDK4-208ENST00000551706 HSBP1L1C9JCN9 74 aa10.62□□□□□ -0.71
CDK4-208ENST00000551706 S100A12P80511 92 aa10.62□□□□□ -0.71
CDK4-208ENST00000551706 LINC00167Q96N53 147 aa10.62□□□□□ -0.71
CDK4-208ENST00000551706 GAGE10A6NGK3 116 aa10.6□□□□□ -0.71
CDK4-208ENST00000551706 REG3GQ6UW15 175 aa10.6□□□□□ -0.71
CDK4-208ENST00000551706 ATOH7Q8N100 152 aa10.6□□□□□ -0.71
CDK4-208ENST00000551706 VAMP8Q9BV40 100 aa10.6□□□□□ -0.71
CDK4-208ENST00000551706 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
CDK4-208ENST00000551706 C12orf57Q99622 126 aa10.59□□□□□ -0.71
CDK4-208ENST00000551706 BOD1L2Q8IYS8 172 aa10.58□□□□□ -0.72
CDK4-208ENST00000551706 DIRC1Q969H9 104 aa10.58□□□□□ -0.72
CDK4-208ENST00000551706 A0A0J9YXY3 114 aa10.57□□□□□ -0.72
CDK4-208ENST00000551706 LOC107984156A0A0G2JMH3 177 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 BCE1O60756 84 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 ARL17AQ8IVW1 177 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 LINC00518Q8N0U6 118 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 Q8NDZ9 215 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
CDK4-208ENST00000551706 IGLV1-50A0A075B6I6 118 aa10.55□□□□□ -0.72
CDK4-208ENST00000551706 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
CDK4-208ENST00000551706 M0R378 163 aa10.55□□□□□ -0.72
CDK4-208ENST00000551706 TNXBP22105 4242 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 ZNF815PA8K554 130 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 ZNF861PO60384 105 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 DAND5Q8N907 189 aa10.54□□□□□ -0.72
CDK4-208ENST00000551706 H0Y9J4 135 aa10.53□□□□□ -0.72
CDK4-208ENST00000551706 SPATA45Q537H7 98 aa10.53□□□□□ -0.72
CDK4-208ENST00000551706 LINC01600Q96MT4 127 aa10.53□□□□□ -0.72
CDK4-208ENST00000551706 PAM16Q9Y3D7 125 aa10.53□□□□□ -0.72
CDK4-208ENST00000551706 TIMM17BO60830 172 aa10.52□□□□□ -0.73
CDK4-208ENST00000551706 RPL28P46779 137 aaKnown RBP10.52□□□□□ -0.73
CDK4-208ENST00000551706 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
CDK4-208ENST00000551706 TRBV10-2A0A0K0K1G8 114 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 NCR3O14931 201 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 NDUFC2O95298 119 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 UBE2AP49459 152 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 TTTY13Q9BZ97 58 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 TMEM126AQ9H061 195 aa10.49□□□□□ -0.73
CDK4-208ENST00000551706 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
CDK4-208ENST00000551706 LITAFQ99732 161 aa10.48□□□□□ -0.73
CDK4-208ENST00000551706 SPANXB1Q9NS25 103 aaPredicted RBP10.48□□□□□ -0.73
CDK4-208ENST00000551706 TMEM238C9JI98 176 aa10.47□□□□□ -0.73
CDK4-208ENST00000551706 TSTD3H0UI37 97 aa10.46□□□□□ -0.73
CDK4-208ENST00000551706 PRYO14603 147 aa10.46□□□□□ -0.73
CDK4-208ENST00000551706 NPC2P61916 151 aa10.45□□□□□ -0.74
CDK4-208ENST00000551706 SOSTDC1Q6X4U4 206 aa10.45□□□□□ -0.74
CDK4-208ENST00000551706 FAM19A1Q7Z5A9 133 aa10.45□□□□□ -0.74
CDK4-208ENST00000551706 KRTAP13-1Q8IUC0 172 aa10.45□□□□□ -0.74
CDK4-208ENST00000551706 PCP2Q8IVA1 136 aa10.44□□□□□ -0.74
CDK4-208ENST00000551706 LINC00308Q8TCZ7 52 aa10.44□□□□□ -0.74
CDK4-208ENST00000551706 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
CDK4-208ENST00000551706 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
CDK4-208ENST00000551706 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
CDK4-208ENST00000551706 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
CDK4-208ENST00000551706 DDTP30046 118 aa10.42□□□□□ -0.74
CDK4-208ENST00000551706 KRTAP10-8P60410 259 aa10.42□□□□□ -0.74
CDK4-208ENST00000551706 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms