RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PSORS1C2Q9UIG4 136 aa13.94□□□□□ -0.18
BRF1-216ENST00000550208 PLA2G2DQ9UNK4 145 aa13.94□□□□□ -0.18
BRF1-216ENST00000550208 FLG2Q5D862 2391 aaPredicted RBP13.94□□□□□ -0.18
BRF1-216ENST00000550208 PKHD1L1Q86WI1 4243 aa13.92□□□□□ -0.18
BRF1-216ENST00000550208 C20orf202A1L168 122 aa13.91□□□□□ -0.18
BRF1-216ENST00000550208 UBE2BP63146 152 aa13.91□□□□□ -0.18
BRF1-216ENST00000550208 NMUP48645 174 aa13.9□□□□□ -0.18
BRF1-216ENST00000550208 LINC00587B1AMM8 73 aa13.89□□□□□ -0.19
BRF1-216ENST00000550208 LBHQ53QV2 105 aaPredicted RBP13.89□□□□□ -0.19
BRF1-216ENST00000550208 TP73-AS1Q9UF72 201 aa13.89□□□□□ -0.19
BRF1-216ENST00000550208 IGLV5-37A0A075B6J1 123 aa13.88□□□□□ -0.19
BRF1-216ENST00000550208 C1orf137Q5JT78 98 aa13.88□□□□□ -0.19
BRF1-216ENST00000550208 MRPL55Q7Z7F7 128 aaKnown RBP13.88□□□□□ -0.19
BRF1-216ENST00000550208 ATOH7Q8N100 152 aa13.88□□□□□ -0.19
BRF1-216ENST00000550208 MIR7-3HGQ8N6C7 128 aa13.88□□□□□ -0.19
BRF1-216ENST00000550208 IGKV2D-26A0A0A0MRZ7 120 aa13.87□□□□□ -0.19
BRF1-216ENST00000550208 Q8NDZ9 215 aa13.87□□□□□ -0.19
BRF1-216ENST00000550208 LINC00167Q96N53 147 aa13.87□□□□□ -0.19
BRF1-216ENST00000550208 VPREB1P12018 145 aa13.86□□□□□ -0.19
BRF1-216ENST00000550208 GAGE10A6NGK3 116 aa13.85□□□□□ -0.19
BRF1-216ENST00000550208 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
BRF1-216ENST00000550208 NKAPP1Q8N9T2 125 aa13.85□□□□□ -0.19
BRF1-216ENST00000550208 TMA7Q9Y2S6 64 aaKnown RBP13.85□□□□□ -0.19
BRF1-216ENST00000550208 RPL24P83731 157 aaKnown RBP13.84□□□□□ -0.19
BRF1-216ENST00000550208 A0A0J9YXY3 114 aa13.83□□□□□ -0.2
BRF1-216ENST00000550208 RPL37AP8A6NKH3 93 aa13.83□□□□□ -0.2
BRF1-216ENST00000550208 ANKRD39Q53RE8 183 aa13.83□□□□□ -0.2
BRF1-216ENST00000550208 DAND5Q8N907 189 aa13.83□□□□□ -0.2
BRF1-216ENST00000550208 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
BRF1-216ENST00000550208 AKR1D1P51857 326 aa13.81□□□□□ -0.2
BRF1-216ENST00000550208 MYCBP2O75592 4640 aa13.8□□□□□ -0.2
BRF1-216ENST00000550208 IGLV7-43P04211 117 aa13.8□□□□□ -0.2
BRF1-216ENST00000550208 SPINK6Q6UWN8 80 aa13.8□□□□□ -0.2
BRF1-216ENST00000550208 BOD1L2Q8IYS8 172 aa13.79□□□□□ -0.2
BRF1-216ENST00000550208 ZNF815PA8K554 130 aa13.78□□□□□ -0.2
BRF1-216ENST00000550208 ADAMTSL4-AS1Q5T5F5 129 aa13.78□□□□□ -0.2
BRF1-216ENST00000550208 KRTAP29-1A8MX34 341 aaPredicted RBP13.77□□□□□ -0.21
BRF1-216ENST00000550208 LRP1Q07954 4544 aaKnown RBP13.76□□□□□ -0.21
BRF1-216ENST00000550208 FAT3Q8TDW7 4589 aa13.75□□□□□ -0.21
BRF1-216ENST00000550208 LOC107984156A0A0G2JMH3 177 aa13.75□□□□□ -0.21
BRF1-216ENST00000550208 ARL17AQ8IVW1 177 aa13.75□□□□□ -0.21
BRF1-216ENST00000550208 IGLV1-50A0A075B6I6 118 aa13.74□□□□□ -0.21
BRF1-216ENST00000550208 IGKV2-28A0A075B6P5 120 aa13.74□□□□□ -0.21
BRF1-216ENST00000550208 SCGB1D1O95968 90 aa13.74□□□□□ -0.21
BRF1-216ENST00000550208 OXTP01178 125 aa13.74□□□□□ -0.21
BRF1-216ENST00000550208 IGKV2D-28P01615 120 aa13.74□□□□□ -0.21
BRF1-216ENST00000550208 M0R378 163 aa13.73□□□□□ -0.21
BRF1-216ENST00000550208 LITAFQ99732 161 aa13.73□□□□□ -0.21
BRF1-216ENST00000550208 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
BRF1-216ENST00000550208 NCR3O14931 201 aa13.71□□□□□ -0.21
BRF1-216ENST00000550208 EIF4EBP3O60516 100 aaPredicted RBP13.71□□□□□ -0.21
BRF1-216ENST00000550208 TIMM17BO60830 172 aa13.71□□□□□ -0.21
BRF1-216ENST00000550208 NPC2P61916 151 aa13.71□□□□□ -0.21
BRF1-216ENST00000550208 SOSTDC1Q6X4U4 206 aa13.71□□□□□ -0.21
BRF1-216ENST00000550208 J3QL48 77 aa13.7□□□□□ -0.22
BRF1-216ENST00000550208 BCE1O60756 84 aa13.7□□□□□ -0.22
BRF1-216ENST00000550208 MIEN1Q9BRT3 115 aa13.69□□□□□ -0.22
BRF1-216ENST00000550208 TMEM238C9JI98 176 aa13.68□□□□□ -0.22
BRF1-216ENST00000550208 HSBP1L1C9JCN9 74 aa13.67□□□□□ -0.22
BRF1-216ENST00000550208 ZNF861PO60384 105 aa13.67□□□□□ -0.22
BRF1-216ENST00000550208 DIRC1Q969H9 104 aa13.67□□□□□ -0.22
BRF1-216ENST00000550208 REG3GQ6UW15 175 aa13.66□□□□□ -0.22
BRF1-216ENST00000550208 SCGB1D4Q6XE38 83 aa13.66□□□□□ -0.22
BRF1-216ENST00000550208 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
BRF1-216ENST00000550208 TMEM126AQ9H061 195 aa13.65□□□□□ -0.22
BRF1-216ENST00000550208 H0Y9J4 135 aa13.64□□□□□ -0.23
BRF1-216ENST00000550208 NDUFC2O95298 119 aa13.63□□□□□ -0.23
BRF1-216ENST00000550208 TRBV10-3A0A0K0K1G6 114 aa13.62□□□□□ -0.23
BRF1-216ENST00000550208 TRBV10-2A0A0K0K1G8 114 aa13.62□□□□□ -0.23
BRF1-216ENST00000550208 JOSD1Q15040 202 aaPredicted RBP13.62□□□□□ -0.23
BRF1-216ENST00000550208 LINC01600Q96MT4 127 aa13.62□□□□□ -0.23
BRF1-216ENST00000550208 RPL28P46779 137 aaKnown RBP13.61□□□□□ -0.23
BRF1-216ENST00000550208 UBE2AP49459 152 aa13.61□□□□□ -0.23
BRF1-216ENST00000550208 SPANXB1Q9NS25 103 aaPredicted RBP13.61□□□□□ -0.23
BRF1-216ENST00000550208 DMBT1Q9UGM3 2413 aaPredicted RBP13.6□□□□□ -0.23
BRF1-216ENST00000550208 MT1HL1P0DM35 61 aa13.6□□□□□ -0.23
BRF1-216ENST00000550208 FAM19A1Q7Z5A9 133 aa13.6□□□□□ -0.23
BRF1-216ENST00000550208 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
BRF1-216ENST00000550208 SPANXDQ9BXN6 97 aa13.6□□□□□ -0.23
BRF1-216ENST00000550208 SPANXCQ9NY87 97 aa13.6□□□□□ -0.23
BRF1-216ENST00000550208 KCNQ1DNQ9H478 68 aa13.59□□□□□ -0.23
BRF1-216ENST00000550208 DDTP30046 118 aa13.58□□□□□ -0.24
BRF1-216ENST00000550208 PRYO14603 147 aa13.57□□□□□ -0.24
BRF1-216ENST00000550208 PRLHP81277 87 aa13.57□□□□□ -0.24
BRF1-216ENST00000550208 PYY3Q5JQD4 70 aa13.56□□□□□ -0.24
BRF1-216ENST00000550208 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
BRF1-216ENST00000550208 KRTAP10-8P60410 259 aa13.54□□□□□ -0.24
BRF1-216ENST00000550208 MUSTN1Q8IVN3 82 aa13.54□□□□□ -0.24
BRF1-216ENST00000550208 IGLV6-57P01721 117 aa13.53□□□□□ -0.24
BRF1-216ENST00000550208 KRTAP1-4P0C5Y4 121 aa13.53□□□□□ -0.24
BRF1-216ENST00000550208 IFITM1P13164 125 aa13.53□□□□□ -0.24
BRF1-216ENST00000550208 SPRR1AP35321 89 aa13.53□□□□□ -0.24
BRF1-216ENST00000550208 Q6ZVH6 145 aa13.53□□□□□ -0.24
BRF1-216ENST00000550208 HERC1Q15751 4861 aa13.52□□□□□ -0.25
BRF1-216ENST00000550208 COX8AP10176 69 aa13.51□□□□□ -0.25
BRF1-216ENST00000550208 PAM16Q9Y3D7 125 aa13.51□□□□□ -0.25
BRF1-216ENST00000550208 KRTAP4-16G5E9R7 235 aaPredicted RBP13.5□□□□□ -0.25
BRF1-216ENST00000550208 S100A12P80511 92 aa13.5□□□□□ -0.25
BRF1-216ENST00000550208 LINC00337Q8N6G1 96 aa13.5□□□□□ -0.25
BRF1-216ENST00000550208 SPATA45Q537H7 98 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms