RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 TRAV23DV6A0A075B6W5 121 aa5.99□□□□□ -1.45
TMEM116-209ENST00000550020 NDUFC2-KCTD14E9PQ53 114 aa5.99□□□□□ -1.45
TMEM116-209ENST00000550020 M0R378 163 aa5.99□□□□□ -1.45
TMEM116-209ENST00000550020 PRR3P79522 188 aaKnown RBP5.99□□□□□ -1.45
TMEM116-209ENST00000550020 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
TMEM116-209ENST00000550020 SDIM1Q6ZPB5 146 aa5.99□□□□□ -1.45
TMEM116-209ENST00000550020 JMJD1CQ15652 2540 aa5.99□□□□□ -1.45
TMEM116-209ENST00000550020 OTOGQ6ZRI0 2925 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 HECTD1Q9ULT8 2610 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 PDE6GP18545 87 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
TMEM116-209ENST00000550020 KRTAP26-1Q6PEX3 210 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 TM2D3Q9BRN9 247 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
TMEM116-209ENST00000550020 GCN1Q92616 2671 aaKnown RBP5.98□□□□□ -1.45
TMEM116-209ENST00000550020 SETD2Q9BYW2 2564 aaPredicted RBP5.98□□□□□ -1.45
TMEM116-209ENST00000550020 NSD1Q96L73 2696 aaPredicted RBP5.97□□□□□ -1.45
TMEM116-209ENST00000550020 CCKP06307 115 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 COX7BP24311 80 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 SYCNQ0VAF6 134 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 HIGD2BQ4VC39 106 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.97□□□□□ -1.45
TMEM116-209ENST00000550020 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 NOTCH2Q04721 2471 aa5.97□□□□□ -1.45
TMEM116-209ENST00000550020 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.46
TMEM116-209ENST00000550020 SLPIP03973 132 aa5.96□□□□□ -1.46
TMEM116-209ENST00000550020 ATP5EP2Q5VTU8 51 aa5.96□□□□□ -1.46
TMEM116-209ENST00000550020 Q6ZRU5 148 aa5.96□□□□□ -1.46
TMEM116-209ENST00000550020 C15orf56Q8N910 161 aa5.96□□□□□ -1.46
TMEM116-209ENST00000550020 LINC00526Q96FQ7 95 aa5.96□□□□□ -1.46
TMEM116-209ENST00000550020 ZNF469Q96JG9 3925 aaPredicted RBP5.95□□□□□ -1.46
TMEM116-209ENST00000550020 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
TMEM116-209ENST00000550020 VPREB1P12018 145 aa5.95□□□□□ -1.46
TMEM116-209ENST00000550020 Q6JHZ5 121 aa5.95□□□□□ -1.46
TMEM116-209ENST00000550020 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
TMEM116-209ENST00000550020 RBM3P98179 157 aaKnown RBP5.94□□□□□ -1.46
TMEM116-209ENST00000550020 MRAPQ8TCY5 172 aa5.94□□□□□ -1.46
TMEM116-209ENST00000550020 UPK3BQ9BT76 320 aa5.94□□□□□ -1.46
TMEM116-209ENST00000550020 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
TMEM116-209ENST00000550020 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
TMEM116-209ENST00000550020 TLX1NBP0CAT3 122 aa5.93□□□□□ -1.46
TMEM116-209ENST00000550020 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
TMEM116-209ENST00000550020 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
TMEM116-209ENST00000550020 DSCR8Q96T75 97 aa5.93□□□□□ -1.46
TMEM116-209ENST00000550020 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
TMEM116-209ENST00000550020 Q8NDZ9 215 aa5.92□□□□□ -1.46
TMEM116-209ENST00000550020 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
TMEM116-209ENST00000550020 UBL5Q9BZL1 73 aa5.92□□□□□ -1.46
TMEM116-209ENST00000550020 LINC00588Q9Y4M8 146 aa5.92□□□□□ -1.46
TMEM116-209ENST00000550020 AKAP9Q99996 3911 aa5.92□□□□□ -1.46
TMEM116-209ENST00000550020 K7EIL1 84 aa5.91□□□□□ -1.46
TMEM116-209ENST00000550020 Q6ZQY7 126 aa5.91□□□□□ -1.46
TMEM116-209ENST00000550020 HIVEP1P15822 2718 aa5.91□□□□□ -1.46
TMEM116-209ENST00000550020 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
TMEM116-209ENST00000550020 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
TMEM116-209ENST00000550020 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
TMEM116-209ENST00000550020 PKIGQ9Y2B9 76 aa5.9□□□□□ -1.46
TMEM116-209ENST00000550020 TEP1Q99973 2627 aaKnown RBP5.89□□□□□ -1.47
TMEM116-209ENST00000550020 IGLV5-37A0A075B6J1 123 aa5.89□□□□□ -1.47
TMEM116-209ENST00000550020 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
TMEM116-209ENST00000550020 ATOX1O00244 68 aa5.89□□□□□ -1.47
TMEM116-209ENST00000550020 C9orf129Q5T035 196 aaKnown RBP5.89□□□□□ -1.47
TMEM116-209ENST00000550020 Q6ZRP5 223 aa5.89□□□□□ -1.47
TMEM116-209ENST00000550020 KCNQ1DNQ9H478 68 aa5.89□□□□□ -1.47
TMEM116-209ENST00000550020 LOC107984640A0A0U1RRK4 108 aa5.88□□□□□ -1.47
TMEM116-209ENST00000550020 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
TMEM116-209ENST00000550020 Q6ZQT0 140 aa5.88□□□□□ -1.47
TMEM116-209ENST00000550020 DHRS4-AS1Q9P1J3 65 aa5.88□□□□□ -1.47
TMEM116-209ENST00000550020 PRYO14603 147 aa5.87□□□□□ -1.47
TMEM116-209ENST00000550020 C14orf177Q52M58 125 aa5.87□□□□□ -1.47
TMEM116-209ENST00000550020 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
TMEM116-209ENST00000550020 UBE2DNLQ8IWF7 75 aa5.86□□□□□ -1.47
TMEM116-209ENST00000550020 NIPBLQ6KC79 2804 aaeCLIP5.86□□□□□ -1.47
TMEM116-209ENST00000550020 ATRQ13535 2644 aa5.85□□□□□ -1.47
TMEM116-209ENST00000550020 PRB2P02812 416 aaPredicted RBP5.85□□□□□ -1.47
TMEM116-209ENST00000550020 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
TMEM116-209ENST00000550020 CUBNO60494 3623 aa5.85□□□□□ -1.47
TMEM116-209ENST00000550020 NBPF19A0A087WUL8 3843 aa5.85□□□□□ -1.47
TMEM116-209ENST00000550020 F8P00451 2351 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 IGKV3D-7A0A0C4DH55 119 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 ETDCA0A1B0GVM5 59 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 A0A1B0GW54 56 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 UQCRQO14949 82 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 HIST1H4AP62805 103 aaKnown RBP5.84□□□□□ -1.47
TMEM116-209ENST00000550020 B9D2Q9BPU9 175 aa5.84□□□□□ -1.47
TMEM116-209ENST00000550020 TRBV7-4A0A0J9YYF1 115 aa5.83□□□□□ -1.48
TMEM116-209ENST00000550020 PSCAO43653 123 aa5.83□□□□□ -1.48
TMEM116-209ENST00000550020 BCE1O60756 84 aa5.83□□□□□ -1.48
TMEM116-209ENST00000550020 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
TMEM116-209ENST00000550020 CXCL6P80162 114 aa5.82□□□□□ -1.48
TMEM116-209ENST00000550020 C3orf22Q8N5N4 141 aa5.82□□□□□ -1.48
TMEM116-209ENST00000550020 TENM1Q9UKZ4 2725 aa5.82□□□□□ -1.48
TMEM116-209ENST00000550020 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 B5MCH6 92 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 CCDC179H3BU77 68 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 COX7CP15954 63 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
TMEM116-209ENST00000550020 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 Q6ZRX8 168 aa5.81□□□□□ -1.48
TMEM116-209ENST00000550020 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms