RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 VPS25Q9BRG1 176 aa12.65□□□□□ -0.38
BRF1-215ENST00000549655 NCR3O14931 201 aa12.64□□□□□ -0.39
BRF1-215ENST00000549655 CARD19Q96LW7 228 aa12.64□□□□□ -0.39
BRF1-215ENST00000549655 APLNQ9ULZ1 77 aa12.64□□□□□ -0.39
BRF1-215ENST00000549655 F8WDY8 70 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 PPDPFLQ8WWR9 84 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 H3BT86 120 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 TRACP01848 142 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 RMI2Q96E14 147 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 XAGE1AQ9HD64 81 aa12.63□□□□□ -0.39
BRF1-215ENST00000549655 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
BRF1-215ENST00000549655 H0YGX0 51 aa12.61□□□□□ -0.39
BRF1-215ENST00000549655 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
BRF1-215ENST00000549655 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
BRF1-215ENST00000549655 NDUFC2-KCTD14E9PQ53 114 aa12.59□□□□□ -0.39
BRF1-215ENST00000549655 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
BRF1-215ENST00000549655 UBE2DNLQ8IWF7 75 aa12.59□□□□□ -0.39
BRF1-215ENST00000549655 A0A087WYN8 130 aa12.58□□□□□ -0.4
BRF1-215ENST00000549655 RPL18AQ02543 176 aaKnown RBP12.57□□□□□ -0.4
BRF1-215ENST00000549655 TEX49A0A1B0GTD5 131 aa12.56□□□□□ -0.4
BRF1-215ENST00000549655 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
BRF1-215ENST00000549655 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
BRF1-215ENST00000549655 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
BRF1-215ENST00000549655 NUPR2A6NF83 97 aa12.55□□□□□ -0.4
BRF1-215ENST00000549655 Q6ZRP5 223 aa12.55□□□□□ -0.4
BRF1-215ENST00000549655 IGLV6-57P01721 117 aa12.54□□□□□ -0.4
BRF1-215ENST00000549655 SLPIP03973 132 aa12.54□□□□□ -0.4
BRF1-215ENST00000549655 BAALC-AS2P0C853 105 aa12.54□□□□□ -0.4
BRF1-215ENST00000549655 CBY1Q9Y3M2 126 aa12.54□□□□□ -0.4
BRF1-215ENST00000549655 DNAL4O96015 105 aa12.53□□□□□ -0.4
BRF1-215ENST00000549655 LECT2O14960 151 aa12.52□□□□□ -0.4
BRF1-215ENST00000549655 VPREB1P12018 145 aa12.52□□□□□ -0.41
BRF1-215ENST00000549655 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
BRF1-215ENST00000549655 DNAH1Q9P2D7 4330 aa12.51□□□□□ -0.41
BRF1-215ENST00000549655 TRBV10-3A0A0K0K1G6 114 aa12.5□□□□□ -0.41
BRF1-215ENST00000549655 LYSTQ99698 3801 aa12.49□□□□□ -0.41
BRF1-215ENST00000549655 CSMD3Q7Z407 3707 aa12.49□□□□□ -0.41
BRF1-215ENST00000549655 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
BRF1-215ENST00000549655 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
BRF1-215ENST00000549655 MEGF8Q7Z7M0 2845 aa12.48□□□□□ -0.41
BRF1-215ENST00000549655 C9orf129Q5T035 196 aaKnown RBP12.48□□□□□ -0.41
BRF1-215ENST00000549655 DNHD1Q96M86 4753 aa12.48□□□□□ -0.41
BRF1-215ENST00000549655 TLX1NBP0CAT3 122 aa12.47□□□□□ -0.41
BRF1-215ENST00000549655 C22orf24Q9Y442 160 aa12.47□□□□□ -0.41
BRF1-215ENST00000549655 M0R378 163 aa12.46□□□□□ -0.41
BRF1-215ENST00000549655 A0A1B0GX51 115 aa12.45□□□□□ -0.42
BRF1-215ENST00000549655 TRAV23DV6A0A075B6W5 121 aa12.45□□□□□ -0.42
BRF1-215ENST00000549655 Q8N814 137 aa12.45□□□□□ -0.42
BRF1-215ENST00000549655 TENM2Q9NT68 2774 aa12.45□□□□□ -0.42
BRF1-215ENST00000549655 PSCAO43653 123 aa12.44□□□□□ -0.42
BRF1-215ENST00000549655 LINC00167Q96N53 147 aa12.42□□□□□ -0.42
BRF1-215ENST00000549655 LINC00575Q6W349 94 aa12.41□□□□□ -0.42
BRF1-215ENST00000549655 CDIP1Q9H305 208 aa12.41□□□□□ -0.42
BRF1-215ENST00000549655 ORMDL1Q9P0S3 153 aa12.41□□□□□ -0.42
BRF1-215ENST00000549655 DIRC1Q969H9 104 aa12.41□□□□□ -0.42
BRF1-215ENST00000549655 ZNF73O43830 326 aaPredicted RBP12.4□□□□□ -0.42
BRF1-215ENST00000549655 SNCGO76070 127 aa12.4□□□□□ -0.42
BRF1-215ENST00000549655 SERTAD4-AS1Q5TG53 156 aa12.4□□□□□ -0.42
BRF1-215ENST00000549655 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
BRF1-215ENST00000549655 KRTAP21-3Q3LHN1 58 aa12.39□□□□□ -0.43
BRF1-215ENST00000549655 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
BRF1-215ENST00000549655 NKAPP1Q8N9T2 125 aa12.39□□□□□ -0.43
BRF1-215ENST00000549655 GAGE2BQ13066 116 aa12.38□□□□□ -0.43
BRF1-215ENST00000549655 DNAH7Q8WXX0 4024 aa12.38□□□□□ -0.43
BRF1-215ENST00000549655 PLA2G2DQ9UNK4 145 aa12.38□□□□□ -0.43
BRF1-215ENST00000549655 LOC107984640A0A0U1RRK4 108 aa12.37□□□□□ -0.43
BRF1-215ENST00000549655 hADV29S1A0JD25 119 aa12.37□□□□□ -0.43
BRF1-215ENST00000549655 SIGMAR1Q99720 223 aa12.37□□□□□ -0.43
BRF1-215ENST00000549655 PLECQ15149 4684 aaKnown RBP12.36□□□□□ -0.43
BRF1-215ENST00000549655 FAM168BA1KXE4 195 aa12.35□□□□□ -0.43
BRF1-215ENST00000549655 COX7BP24311 80 aa12.34□□□□□ -0.43
BRF1-215ENST00000549655 CNBPP62633 177 aaKnown RBP12.34□□□□□ -0.43
BRF1-215ENST00000549655 C7orf33Q8WU49 177 aa12.34□□□□□ -0.43
BRF1-215ENST00000549655 TRBV7-6A0A0J9YX20 115 aa12.34□□□□□ -0.43
BRF1-215ENST00000549655 INAFM2P0DMQ5 153 aa12.33□□□□□ -0.44
BRF1-215ENST00000549655 ELOF1P60002 83 aaKnown RBP12.33□□□□□ -0.44
BRF1-215ENST00000549655 C14orf177Q52M58 125 aa12.33□□□□□ -0.44
BRF1-215ENST00000549655 TMEM256-PLSCR3K7ERE1 68 aa12.32□□□□□ -0.44
BRF1-215ENST00000549655 IGLV5-37A0A075B6J1 123 aa12.32□□□□□ -0.44
BRF1-215ENST00000549655 OBSCN-AS1Q96MR7 158 aa12.32□□□□□ -0.44
BRF1-215ENST00000549655 STARD9Q9P2P6 4700 aa12.31□□□□□ -0.44
BRF1-215ENST00000549655 DNAH10Q8IVF4 4471 aa12.31□□□□□ -0.44
BRF1-215ENST00000549655 FAM240AA0A1B0GVK7 77 aa12.31□□□□□ -0.44
BRF1-215ENST00000549655 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.3□□□□□ -0.44
BRF1-215ENST00000549655 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
BRF1-215ENST00000549655 KCNQ1DNQ9H478 68 aa12.3□□□□□ -0.44
BRF1-215ENST00000549655 XGP55808 180 aa12.3□□□□□ -0.44
BRF1-215ENST00000549655 Q6ZRN7 208 aaPredicted RBP12.29□□□□□ -0.44
BRF1-215ENST00000549655 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
BRF1-215ENST00000549655 M0R2N4 97 aa12.29□□□□□ -0.44
BRF1-215ENST00000549655 C14orf132Q9NPU4 83 aa12.29□□□□□ -0.44
BRF1-215ENST00000549655 Q6ZQY7 126 aa12.28□□□□□ -0.44
BRF1-215ENST00000549655 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
BRF1-215ENST00000549655 A0A1B0GV72 72 aa12.27□□□□□ -0.45
BRF1-215ENST00000549655 RPL37AP8A6NKH3 93 aa12.27□□□□□ -0.45
BRF1-215ENST00000549655 MT-ATP8P03928 68 aa12.27□□□□□ -0.45
BRF1-215ENST00000549655 LINC00528Q8N1L1 170 aa12.27□□□□□ -0.45
BRF1-215ENST00000549655 A0A096LNI7 61 aa12.26□□□□□ -0.45
BRF1-215ENST00000549655 C16orf90A8MZG2 172 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms