RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
PRDM4-204ENST00000549416 OBSCN-AS1Q96MR7 158 aa2.04□□□□□ -2.08
PRDM4-204ENST00000549416 DIDO1Q9BTC0 2240 aaKnown RBP2.04□□□□□ -2.08
PRDM4-204ENST00000549416 ZGRF1Q86YA3 2104 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 ACYP2P14621 99 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 Q96NJ1 140 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 ARHGAP32A7KAX9 2087 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 CR1P17927 2039 aa2.03□□□□□ -2.08
PRDM4-204ENST00000549416 COL4A2P08572 1712 aa2.03□□□□□ -2.09
PRDM4-204ENST00000549416 LOC730098B7Z3J9 87 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 K7EMI3 77 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 FXYD4P59646 89 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 PCNTO95613 3336 aa2.02□□□□□ -2.09
PRDM4-204ENST00000549416 CEP350Q5VT06 3117 aa2.01□□□□□ -2.09
PRDM4-204ENST00000549416 KIAA0100Q14667 2235 aaKnown RBP2.01□□□□□ -2.09
PRDM4-204ENST00000549416 M0R2N4 97 aa2.01□□□□□ -2.09
PRDM4-204ENST00000549416 PI4KAP42356 2102 aa2.01□□□□□ -2.09
PRDM4-204ENST00000549416 ZNF625Q96I27 306 aaPredicted RBP2.01□□□□□ -2.09
PRDM4-204ENST00000549416 LINC00472Q9H8W2 130 aa2.01□□□□□ -2.09
PRDM4-204ENST00000549416 A0A1B0GU69 56 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 NDUFA4O00483 81 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 CAV3P56539 151 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 SNRPGP62308 76 aaKnown RBP2□□□□□ -2.09
PRDM4-204ENST00000549416 COA5Q86WW8 74 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 DEFB119Q8N690 84 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 PRO3102Q9H379 93 aa2□□□□□ -2.09
PRDM4-204ENST00000549416 MED12Q93074 2177 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 HEATR1Q9H583 2144 aaKnown RBP1.99□□□□□ -2.09
PRDM4-204ENST00000549416 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
PRDM4-204ENST00000549416 M0R1W7 72 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 DEFB133Q30KQ1 61 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 DEFB114Q30KQ6 69 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 Q6ZQY7 126 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 DNAH12Q6ZR08 3092 aa1.99□□□□□ -2.09
PRDM4-204ENST00000549416 SPTY2D1-AS1A0A0U1RR47 76 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 NCR3O14931 201 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 ARL14EPLP0DKL9 152 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 MYO7BQ6PIF6 2116 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 HTTP42858 3142 aa1.98□□□□□ -2.09
PRDM4-204ENST00000549416 NINQ8N4C6 2090 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 IGIPA6NJ69 53 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 CCL22O00626 93 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 COX6B1P14854 86 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 COX7BP24311 80 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 RPL38P63173 70 aaKnown RBP1.97□□□□□ -2.09
PRDM4-204ENST00000549416 CENPFP49454 3210 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 ZFHX2Q9C0A1 2572 aaPredicted RBP1.97□□□□□ -2.09
PRDM4-204ENST00000549416 SPAG17Q6Q759 2223 aa1.97□□□□□ -2.09
PRDM4-204ENST00000549416 LINC00959A0A1B0GUT2 108 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 LINC01546A6NGU7 62 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 I3L3M4 83 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 CCL19Q99731 98 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 PCDH15Q96QU1 1955 aa1.96□□□□□ -2.1
PRDM4-204ENST00000549416 CEP192Q8TEP8 1941 aa1.95□□□□□ -2.1
PRDM4-204ENST00000549416 DEFB124Q8NES8 71 aa1.95□□□□□ -2.1
PRDM4-204ENST00000549416 COX14Q96I36 57 aa1.95□□□□□ -2.1
PRDM4-204ENST00000549416 BRCA2P51587 3418 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 KMT2BQ9UMN6 2715 aaPredicted RBP1.94□□□□□ -2.1
PRDM4-204ENST00000549416 SMIM11BQ8TCY0 68 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 KCNQ1DNQ9H478 68 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 TIMM8BQ9Y5J9 83 aaPredicted RBP1.94□□□□□ -2.1
PRDM4-204ENST00000549416 SPTBP11277 2137 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 ESPL1Q14674 2120 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 MYO7AQ13402 2215 aa1.94□□□□□ -2.1
PRDM4-204ENST00000549416 PRRC2BQ5JSZ5 2229 aaKnown RBP1.94□□□□□ -2.1
PRDM4-204ENST00000549416 TET1Q8NFU7 2136 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 ETDCA0A1B0GVM5 59 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 H0YGG7 62 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 SPINK4O60575 86 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 DEFB110Q30KQ9 67 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 C10orf99Q6UWK7 81 aa1.93□□□□□ -2.1
PRDM4-204ENST00000549416 ARFGEF3Q5TH69 2177 aa1.92□□□□□ -2.1
PRDM4-204ENST00000549416 INTS1Q8N201 2190 aaKnown RBP1.92□□□□□ -2.1
PRDM4-204ENST00000549416 HAMPP81172 84 aa1.92□□□□□ -2.1
PRDM4-204ENST00000549416 PDE4DIPQ5VU43 2346 aa1.92□□□□□ -2.1
PRDM4-204ENST00000549416 BRWD1Q9NSI6 2320 aa1.92□□□□□ -2.1
PRDM4-204ENST00000549416 TRANK1O15050 2925 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 CEP290O15078 2479 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 H0YGX0 51 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 MRPL33O75394 65 aaKnown RBP1.91□□□□□ -2.1
PRDM4-204ENST00000549416 STATHP02808 62 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 FXYD6P3P58550 94 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 DEFB109BQ30KR1 87 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 Q6ZRN7 208 aaPredicted RBP1.91□□□□□ -2.1
PRDM4-204ENST00000549416 Q6ZRX8 168 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 RPS27LQ71UM5 84 aaKnown RBP1.91□□□□□ -2.1
PRDM4-204ENST00000549416 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 UNC13CQ8NB66 2214 aa1.91□□□□□ -2.1
PRDM4-204ENST00000549416 DNAJC13O75165 2243 aa1.9□□□□□ -2.1
PRDM4-204ENST00000549416 G3V318 75 aa1.9□□□□□ -2.11
PRDM4-204ENST00000549416 PIN1P1O15428 100 aa1.9□□□□□ -2.11
PRDM4-204ENST00000549416 LY6G6CO95867 125 aa1.9□□□□□ -2.11
PRDM4-204ENST00000549416 PLAC4Q8WY50 150 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms