RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 HIST1H2BLQ99880 126 aa6□□□□□ -1.45
RAB5B-205ENST00000549034 C5orf52A6NGY3 159 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 LINC00587B1AMM8 73 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 E9PLD3 99 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 SMIM13P0DJ93 91 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 TSPEAR-AS2P59090 65 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 SERTAD4-AS1Q5TG53 156 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 C22orf24Q9Y442 160 aa5.99□□□□□ -1.45
RAB5B-205ENST00000549034 M0QXV9 152 aa5.98□□□□□ -1.45
RAB5B-205ENST00000549034 UBE2BP63146 152 aa5.98□□□□□ -1.45
RAB5B-205ENST00000549034 ATOH7Q8N100 152 aa5.98□□□□□ -1.45
RAB5B-205ENST00000549034 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
RAB5B-205ENST00000549034 NMUP48645 174 aa5.97□□□□□ -1.45
RAB5B-205ENST00000549034 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
RAB5B-205ENST00000549034 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
RAB5B-205ENST00000549034 AKR1D1P51857 326 aa5.96□□□□□ -1.46
RAB5B-205ENST00000549034 MIR7-3HGQ8N6C7 128 aa5.96□□□□□ -1.46
RAB5B-205ENST00000549034 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
RAB5B-205ENST00000549034 IGKV2D-26A0A0A0MRZ7 120 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
RAB5B-205ENST00000549034 RPL24P83731 157 aaKnown RBP5.95□□□□□ -1.46
RAB5B-205ENST00000549034 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 MRPL55Q7Z7F7 128 aaKnown RBP5.95□□□□□ -1.46
RAB5B-205ENST00000549034 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 NKAPP1Q8N9T2 125 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
RAB5B-205ENST00000549034 A0A0J9YXY3 114 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 GAGE10A6NGK3 116 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 DAND5Q8N907 189 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 LINC00167Q96N53 147 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 TP73-AS1Q9UF72 201 aa5.94□□□□□ -1.46
RAB5B-205ENST00000549034 ZNF815PA8K554 130 aa5.93□□□□□ -1.46
RAB5B-205ENST00000549034 HNRNPA3P51991 378 aaKnown RBP5.93□□□□□ -1.46
RAB5B-205ENST00000549034 TTTY13Q9BZ97 58 aa5.93□□□□□ -1.46
RAB5B-205ENST00000549034 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
RAB5B-205ENST00000549034 HSBP1L1C9JCN9 74 aa5.92□□□□□ -1.46
RAB5B-205ENST00000549034 VPREB1P12018 145 aa5.92□□□□□ -1.46
RAB5B-205ENST00000549034 BOD1L2Q8IYS8 172 aa5.92□□□□□ -1.46
RAB5B-205ENST00000549034 TMA7Q9Y2S6 64 aaKnown RBP5.92□□□□□ -1.46
RAB5B-205ENST00000549034 FAT1Q14517 4588 aa5.92□□□□□ -1.46
RAB5B-205ENST00000549034 NPC2P61916 151 aa5.91□□□□□ -1.46
RAB5B-205ENST00000549034 ADAMTSL4-AS1Q5T5F5 129 aa5.91□□□□□ -1.46
RAB5B-205ENST00000549034 Q8NDZ9 215 aa5.91□□□□□ -1.46
RAB5B-205ENST00000549034 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
RAB5B-205ENST00000549034 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
RAB5B-205ENST00000549034 SPINK6Q6UWN8 80 aa5.9□□□□□ -1.46
RAB5B-205ENST00000549034 SCGB1D4Q6XE38 83 aa5.9□□□□□ -1.46
RAB5B-205ENST00000549034 MIEN1Q9BRT3 115 aa5.9□□□□□ -1.46
RAB5B-205ENST00000549034 IGLV1-50A0A075B6I6 118 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 IGKV2-28A0A075B6P5 120 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 M0R378 163 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 NCR3O14931 201 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 IGKV2D-28P01615 120 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 PCP2Q8IVA1 136 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
RAB5B-205ENST00000549034 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
RAB5B-205ENST00000549034 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
RAB5B-205ENST00000549034 TIMM17BO60830 172 aa5.88□□□□□ -1.47
RAB5B-205ENST00000549034 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
RAB5B-205ENST00000549034 LINC00308Q8TCZ7 52 aa5.87□□□□□ -1.47
RAB5B-205ENST00000549034 LITAFQ99732 161 aa5.87□□□□□ -1.47
RAB5B-205ENST00000549034 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
RAB5B-205ENST00000549034 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
RAB5B-205ENST00000549034 BCE1O60756 84 aa5.86□□□□□ -1.47
RAB5B-205ENST00000549034 JOSD1Q15040 202 aaPredicted RBP5.86□□□□□ -1.47
RAB5B-205ENST00000549034 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
RAB5B-205ENST00000549034 SOSTDC1Q6X4U4 206 aa5.86□□□□□ -1.47
RAB5B-205ENST00000549034 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
RAB5B-205ENST00000549034 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 ZNF861PO60384 105 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 NDUFC2O95298 119 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 OXTP01178 125 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 UBE2AP49459 152 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 DIRC1Q969H9 104 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
RAB5B-205ENST00000549034 SRRM2Q9UQ35 2752 aaKnown RBP5.85□□□□□ -1.47
RAB5B-205ENST00000549034 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
RAB5B-205ENST00000549034 S100A12P80511 92 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 S100A7L2Q5SY68 101 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 FAM19A1Q7Z5A9 133 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 SPANXDQ9BXN6 97 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 SPANXCQ9NY87 97 aa5.84□□□□□ -1.47
RAB5B-205ENST00000549034 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 TRBV10-2A0A0K0K1G8 114 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 DDTP30046 118 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 SPATA45Q537H7 98 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 OR13C6PQ8NH95 151 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
RAB5B-205ENST00000549034 PAM16Q9Y3D7 125 aa5.83□□□□□ -1.48
RAB5B-205ENST00000549034 H0Y9J4 135 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 COX8AP10176 69 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 IFITM1P13164 125 aa5.82□□□□□ -1.48
RAB5B-205ENST00000549034 Q6ZVH6 145 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms