RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C22orf24Q9Y442 160 aa9.31□□□□□ -0.92
PRPF40B-209ENST00000548825 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
PRPF40B-209ENST00000548825 NANOS2P60321 138 aaKnown RBP9.3□□□□□ -0.92
PRPF40B-209ENST00000548825 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
PRPF40B-209ENST00000548825 KPRPQ5T749 579 aaPredicted RBP9.3□□□□□ -0.92
PRPF40B-209ENST00000548825 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
PRPF40B-209ENST00000548825 KIAA0087Q14695 138 aa9.3□□□□□ -0.92
PRPF40B-209ENST00000548825 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
PRPF40B-209ENST00000548825 LINC00643Q86TS7 51 aa9.29□□□□□ -0.92
PRPF40B-209ENST00000548825 MIFP14174 115 aa9.29□□□□□ -0.92
PRPF40B-209ENST00000548825 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
PRPF40B-209ENST00000548825 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
PRPF40B-209ENST00000548825 C9orf153Q5TBE3 101 aa9.27□□□□□ -0.93
PRPF40B-209ENST00000548825 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
PRPF40B-209ENST00000548825 LELP1Q5T871 98 aa9.27□□□□□ -0.93
PRPF40B-209ENST00000548825 ACYP1P07311 99 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 Q6ZQY7 126 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 LINC00612Q8N6U2 182 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 HAMPP81172 84 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 Q8N814 137 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 KLK5Q9Y337 293 aaPredicted RBP9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
PRPF40B-209ENST00000548825 TRBV10-3A0A0K0K1G6 114 aa9.25□□□□□ -0.93
PRPF40B-209ENST00000548825 DEFB105AQ8NG35 78 aa9.25□□□□□ -0.93
PRPF40B-209ENST00000548825 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
PRPF40B-209ENST00000548825 A0A1B0GX51 115 aa9.23□□□□□ -0.93
PRPF40B-209ENST00000548825 TRAV23DV6A0A075B6W5 121 aa9.23□□□□□ -0.93
PRPF40B-209ENST00000548825 hADV29S1A0JD25 119 aa9.22□□□□□ -0.93
PRPF40B-209ENST00000548825 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
PRPF40B-209ENST00000548825 C6orf48Q9UBA6 75 aa9.22□□□□□ -0.93
PRPF40B-209ENST00000548825 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
PRPF40B-209ENST00000548825 DEFB131BA0A096LNP1 70 aa9.21□□□□□ -0.93
PRPF40B-209ENST00000548825 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.94
PRPF40B-209ENST00000548825 Q6Q795 121 aa9.2□□□□□ -0.94
PRPF40B-209ENST00000548825 Q6ZRU5 148 aa9.2□□□□□ -0.94
PRPF40B-209ENST00000548825 FAM19A1Q7Z5A9 133 aa9.2□□□□□ -0.94
PRPF40B-209ENST00000548825 TMEM256-PLSCR3K7ERE1 68 aa9.2□□□□□ -0.94
PRPF40B-209ENST00000548825 ESRGQ1W209 222 aa9.2□□□□□ -0.94
PRPF40B-209ENST00000548825 M0R2N4 97 aa9.19□□□□□ -0.94
PRPF40B-209ENST00000548825 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
PRPF40B-209ENST00000548825 RBM3P98179 157 aaKnown RBP9.18□□□□□ -0.94
PRPF40B-209ENST00000548825 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
PRPF40B-209ENST00000548825 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
PRPF40B-209ENST00000548825 COX17Q14061 63 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 DIRC1Q969H9 104 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 DSCR8Q96T75 97 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
PRPF40B-209ENST00000548825 LINC00575Q6W349 94 aa9.15□□□□□ -0.94
PRPF40B-209ENST00000548825 CCKP06307 115 aa9.14□□□□□ -0.95
PRPF40B-209ENST00000548825 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
PRPF40B-209ENST00000548825 ZNF73O43830 326 aaPredicted RBP9.14□□□□□ -0.95
PRPF40B-209ENST00000548825 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
PRPF40B-209ENST00000548825 NDUFC2O95298 119 aa9.13□□□□□ -0.95
PRPF40B-209ENST00000548825 COX7BP24311 80 aa9.12□□□□□ -0.95
PRPF40B-209ENST00000548825 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
PRPF40B-209ENST00000548825 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
PRPF40B-209ENST00000548825 LINC01561Q8N1V8 128 aa9.11□□□□□ -0.95
PRPF40B-209ENST00000548825 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
PRPF40B-209ENST00000548825 UPK3BQ9BT76 320 aa9.1□□□□□ -0.95
PRPF40B-209ENST00000548825 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
PRPF40B-209ENST00000548825 C3orf84H3BNL1 204 aa9.1□□□□□ -0.95
PRPF40B-209ENST00000548825 GHRHP01286 108 aa9.1□□□□□ -0.95
PRPF40B-209ENST00000548825 ANK2Q01484 3957 aa9.1□□□□□ -0.95
PRPF40B-209ENST00000548825 CASC10Q5T4H9 136 aa9.09□□□□□ -0.95
PRPF40B-209ENST00000548825 Q6ZRP5 223 aa9.09□□□□□ -0.95
PRPF40B-209ENST00000548825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
PRPF40B-209ENST00000548825 Q8N9L7 120 aa9.09□□□□□ -0.95
PRPF40B-209ENST00000548825 SYCNQ0VAF6 134 aa9.08□□□□□ -0.96
PRPF40B-209ENST00000548825 CYSTM1Q9H1C7 97 aa9.08□□□□□ -0.96
PRPF40B-209ENST00000548825 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
PRPF40B-209ENST00000548825 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
PRPF40B-209ENST00000548825 ATOX1O00244 68 aa9.08□□□□□ -0.96
PRPF40B-209ENST00000548825 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
PRPF40B-209ENST00000548825 UQCRQO14949 82 aa9.07□□□□□ -0.96
PRPF40B-209ENST00000548825 FAM19A5Q7Z5A7 132 aaPredicted RBP9.07□□□□□ -0.96
PRPF40B-209ENST00000548825 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
PRPF40B-209ENST00000548825 Q6JHZ5 121 aa9.06□□□□□ -0.96
PRPF40B-209ENST00000548825 SRRM2Q9UQ35 2752 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-209ENST00000548825 COX7CP15954 63 aa9.06□□□□□ -0.96
PRPF40B-209ENST00000548825 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
PRPF40B-209ENST00000548825 IGLV6-57P01721 117 aa9.05□□□□□ -0.96
PRPF40B-209ENST00000548825 NDUFC2-KCTD14E9PQ53 114 aa9.04□□□□□ -0.96
PRPF40B-209ENST00000548825 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-209ENST00000548825 SERTAD4-AS1Q5TG53 156 aa9.03□□□□□ -0.96
PRPF40B-209ENST00000548825 VPREB1P12018 145 aa9.03□□□□□ -0.96
PRPF40B-209ENST00000548825 OBSCN-AS1Q96MR7 158 aa9.03□□□□□ -0.96
PRPF40B-209ENST00000548825 Q6ZQT0 140 aa9.02□□□□□ -0.97
PRPF40B-209ENST00000548825 PPDPFQ9H3Y8 114 aa9.02□□□□□ -0.97
PRPF40B-209ENST00000548825 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
PRPF40B-209ENST00000548825 Q6ZVQ6 151 aa9.02□□□□□ -0.97
PRPF40B-209ENST00000548825 M0R378 163 aa9.02□□□□□ -0.97
PRPF40B-209ENST00000548825 SNURFQ9Y675 71 aa9.01□□□□□ -0.97
PRPF40B-209ENST00000548825 MUC7Q8TAX7 377 aa9.01□□□□□ -0.97
PRPF40B-209ENST00000548825 UBE2BP63146 152 aa9□□□□□ -0.97
PRPF40B-209ENST00000548825 DPH3Q96FX2 82 aa9□□□□□ -0.97
PRPF40B-209ENST00000548825 A0A0G2JQZ4 141 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms