RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
TRAFD1-205ENST00000548277 NDUFA5Q16718 116 aa6.89□□□□□ -1.31
TRAFD1-205ENST00000548277 TMEM170BQ5T4T1 132 aa6.89□□□□□ -1.31
TRAFD1-205ENST00000548277 SVBPQ8N300 66 aa6.89□□□□□ -1.31
TRAFD1-205ENST00000548277 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
TRAFD1-205ENST00000548277 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 FAM229BQ4G0N7 80 aa6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
TRAFD1-205ENST00000548277 VPREB1P12018 145 aa6.87□□□□□ -1.31
TRAFD1-205ENST00000548277 COX17Q14061 63 aa6.87□□□□□ -1.31
TRAFD1-205ENST00000548277 RPL24P83731 157 aaKnown RBP6.86□□□□□ -1.31
TRAFD1-205ENST00000548277 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
TRAFD1-205ENST00000548277 Q8NDZ9 215 aa6.85□□□□□ -1.31
TRAFD1-205ENST00000548277 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 LINC00158P58513 81 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 SFTA2Q6UW10 78 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 CHCHD1Q96BP2 118 aaKnown RBP6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 PLEKHB2Q96CS7 222 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 TMEM126AQ9H061 195 aa6.84□□□□□ -1.31
TRAFD1-205ENST00000548277 TRAV12-1A0A0B4J245 112 aa6.83□□□□□ -1.32
TRAFD1-205ENST00000548277 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
TRAFD1-205ENST00000548277 CBLN2Q8IUK8 224 aa6.83□□□□□ -1.32
TRAFD1-205ENST00000548277 HIGD2AQ9BW72 106 aa6.83□□□□□ -1.32
TRAFD1-205ENST00000548277 M0R378 163 aa6.82□□□□□ -1.32
TRAFD1-205ENST00000548277 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
TRAFD1-205ENST00000548277 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
TRAFD1-205ENST00000548277 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
TRAFD1-205ENST00000548277 DAND5Q8N907 189 aa6.81□□□□□ -1.32
TRAFD1-205ENST00000548277 ATP6V1G1O75348 118 aa6.8□□□□□ -1.32
TRAFD1-205ENST00000548277 HSBP1O75506 76 aa6.8□□□□□ -1.32
TRAFD1-205ENST00000548277 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
TRAFD1-205ENST00000548277 LINC01547P58512 204 aaPredicted RBP6.79□□□□□ -1.32
TRAFD1-205ENST00000548277 H0Y8G0 127 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 TRGC2P03986 189 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 BOD1L2Q8IYS8 172 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
TRAFD1-205ENST00000548277 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
TRAFD1-205ENST00000548277 Q8NBF4 154 aa6.77□□□□□ -1.33
TRAFD1-205ENST00000548277 SPRR4Q96PI1 79 aa6.77□□□□□ -1.33
TRAFD1-205ENST00000548277 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
TRAFD1-205ENST00000548277 HERV-K104P63124 156 aa6.76□□□□□ -1.33
TRAFD1-205ENST00000548277 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
TRAFD1-205ENST00000548277 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
TRAFD1-205ENST00000548277 NCR3O14931 201 aa6.75□□□□□ -1.33
TRAFD1-205ENST00000548277 SERF1AO75920 110 aa6.75□□□□□ -1.33
TRAFD1-205ENST00000548277 LEPROTL1O95214 131 aa6.75□□□□□ -1.33
TRAFD1-205ENST00000548277 CTAG1AP78358 180 aa6.75□□□□□ -1.33
TRAFD1-205ENST00000548277 LINC00587B1AMM8 73 aa6.74□□□□□ -1.33
TRAFD1-205ENST00000548277 LINC00310P59036 64 aa6.74□□□□□ -1.33
TRAFD1-205ENST00000548277 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
TRAFD1-205ENST00000548277 PRYO14603 147 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 LEPROTO15243 131 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 FABP4P15090 132 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 ASB16-AS1Q495Z4 193 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 MAP1LC3CQ9BXW4 147 aa6.73□□□□□ -1.33
TRAFD1-205ENST00000548277 SLC7A5P1Q8MH63 180 aa6.72□□□□□ -1.33
TRAFD1-205ENST00000548277 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
TRAFD1-205ENST00000548277 TRBV10-3A0A0K0K1G6 114 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 ETDCA0A1B0GVM5 59 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 PLNP26678 52 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 SPRR1AP35321 89 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 HSPB8Q9UJY1 196 aa6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
TRAFD1-205ENST00000548277 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 KRTAP4-16G5E9R7 235 aaPredicted RBP6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 J3QQQ9 107 aa6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 DPM2O94777 84 aa6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 SEC61BP60468 96 aaKnown RBP6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
TRAFD1-205ENST00000548277 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
TRAFD1-205ENST00000548277 COLCA2A8K830 154 aa6.69□□□□□ -1.34
TRAFD1-205ENST00000548277 SPINK1P00995 79 aa6.69□□□□□ -1.34
TRAFD1-205ENST00000548277 HERVK_113P61574 105 aa6.69□□□□□ -1.34
TRAFD1-205ENST00000548277 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
TRAFD1-205ENST00000548277 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 IGKCP01834 107 aa6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 S100A12P80511 92 aa6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 MOBPQ13875 183 aa6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
TRAFD1-205ENST00000548277 DDTP30046 118 aa6.67□□□□□ -1.34
TRAFD1-205ENST00000548277 NMUP48645 174 aa6.67□□□□□ -1.34
TRAFD1-205ENST00000548277 TRBV10-2A0A0K0K1G8 114 aa6.66□□□□□ -1.34
TRAFD1-205ENST00000548277 B5MCH6 92 aa6.66□□□□□ -1.34
TRAFD1-205ENST00000548277 MIEN1Q9BRT3 115 aa6.66□□□□□ -1.34
TRAFD1-205ENST00000548277 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
TRAFD1-205ENST00000548277 NPC2P61916 151 aa6.64□□□□□ -1.35
TRAFD1-205ENST00000548277 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
TRAFD1-205ENST00000548277 Q8N377 158 aa6.64□□□□□ -1.35
TRAFD1-205ENST00000548277 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms