RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MRPL57Q9BQC6 102 aaKnown RBP1.84□□□□□ -2.11
SCAF11-210ENST00000547654 LIMD2Q9BT23 127 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 A0A096LNT2 108 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 MCRIP1C9JLW8 97 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 LRP2P98164 4655 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 SPRNQ5BIV9 151 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 MRPL54Q6P161 138 aaKnown RBP1.83□□□□□ -2.12
SCAF11-210ENST00000547654 GTF2H5Q6ZYL4 71 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 LINC00526Q96FQ7 95 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 C14orf144Q96I85 54 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 KRTAP4-1Q9BYQ7 146 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 HEATR1Q9H583 2144 aaKnown RBP1.83□□□□□ -2.12
SCAF11-210ENST00000547654 SRRM2Q9UQ35 2752 aaKnown RBP1.83□□□□□ -2.12
SCAF11-210ENST00000547654 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
SCAF11-210ENST00000547654 NUPR2A6NF83 97 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 TNFP01375 233 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 PDE6GP18545 87 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 RBP2P50120 134 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 IER3IP1Q9Y5U9 82 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 DNAH5Q8TE73 4624 aa1.82□□□□□ -2.12
SCAF11-210ENST00000547654 TRBV10-1A0A0K0K1A3 114 aa1.81□□□□□ -2.12
SCAF11-210ENST00000547654 IGLV3-1P01715 115 aa1.81□□□□□ -2.12
SCAF11-210ENST00000547654 STATHP02808 62 aa1.81□□□□□ -2.12
SCAF11-210ENST00000547654 C12orf73Q69YU5 71 aa1.81□□□□□ -2.12
SCAF11-210ENST00000547654 NDUFA11Q86Y39 141 aa1.81□□□□□ -2.12
SCAF11-210ENST00000547654 CXorf51AA0A1B0GTR3 108 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 TFF1P04155 84 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 CCKP06307 115 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 SMIM6P0DI80 62 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 CBLN1P23435 193 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 UBE2G1P62253 170 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 CATR1Q13166 79 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
SCAF11-210ENST00000547654 S100A7L2Q5SY68 101 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 Q6AWC8 147 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 SLC48A1Q6P1K1 146 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 CCL19Q99731 98 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 RPRMQ9NS64 109 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 PKHD1L1Q86WI1 4243 aa1.8□□□□□ -2.12
SCAF11-210ENST00000547654 SNRNP200O75643 2136 aaKnown RBP1.79□□□□□ -2.12
SCAF11-210ENST00000547654 TCRBV3S1A0A5B6 114 aa1.79□□□□□ -2.12
SCAF11-210ENST00000547654 C9orf153Q5TBE3 101 aa1.79□□□□□ -2.12
SCAF11-210ENST00000547654 SVBPQ8N300 66 aa1.79□□□□□ -2.12
SCAF11-210ENST00000547654 LSM10Q969L4 123 aaKnown RBP1.79□□□□□ -2.12
SCAF11-210ENST00000547654 OBSCN-AS1Q96MR7 158 aa1.79□□□□□ -2.12
SCAF11-210ENST00000547654 MRPL35Q9NZE8 188 aaKnown RBP1.79□□□□□ -2.12
SCAF11-210ENST00000547654 C22orf24Q9Y442 160 aa1.79□□□□□ -2.12
SCAF11-210ENST00000547654 FLG2Q5D862 2391 aaPredicted RBP1.79□□□□□ -2.12
SCAF11-210ENST00000547654 ARFGEF3Q5TH69 2177 aa1.78□□□□□ -2.12
SCAF11-210ENST00000547654 IFNA17P01571 189 aa1.78□□□□□ -2.12
SCAF11-210ENST00000547654 FXYD4P59646 89 aa1.78□□□□□ -2.12
SCAF11-210ENST00000547654 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
SCAF11-210ENST00000547654 TSKUQ8WUA8 353 aa1.78□□□□□ -2.12
SCAF11-210ENST00000547654 IGKV2-29A2NJV5 120 aaPredicted RBP1.77□□□□□ -2.13
SCAF11-210ENST00000547654 TMEM218A2RU14 115 aa1.77□□□□□ -2.13
SCAF11-210ENST00000547654 NPC2P61916 151 aa1.77□□□□□ -2.13
SCAF11-210ENST00000547654 C8orf59Q8N0T1 100 aaPredicted RBP1.77□□□□□ -2.13
SCAF11-210ENST00000547654 IFI27L1Q96BM0 104 aa1.77□□□□□ -2.13
SCAF11-210ENST00000547654 ODF3Q96PU9 254 aa1.77□□□□□ -2.13
SCAF11-210ENST00000547654 VPS13BQ7Z7G8 4022 aa1.77□□□□□ -2.13
SCAF11-210ENST00000547654 NINQ8N4C6 2090 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 A0A0D9SFI3 127 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 IFITM1P13164 125 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 RPL37AP61513 92 aaKnown RBP1.76□□□□□ -2.13
SCAF11-210ENST00000547654 C4orf33Q8N1A6 199 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 SPTSSBQ8NFR3 76 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 C10orf105Q8TEF2 133 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 COA4Q9NYJ1 87 aa1.76□□□□□ -2.13
SCAF11-210ENST00000547654 TRAV12-3A0A0B4J271 114 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 FAM24AA6NFZ4 105 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 DEFB108AA8MXU0 73 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 K7EIL1 84 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 S100A8P05109 93 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
SCAF11-210ENST00000547654 HSD52Q0P140 79 aa1.75□□□□□ -2.13
SCAF11-210ENST00000547654 OOSP1A8MZH6 123 aa1.74□□□□□ -2.13
SCAF11-210ENST00000547654 CYP2G1PQ6ZSU1 146 aa1.74□□□□□ -2.13
SCAF11-210ENST00000547654 ACBD7Q8N6N7 88 aa1.74□□□□□ -2.13
SCAF11-210ENST00000547654 PPP1R1CQ8WVI7 109 aa1.74□□□□□ -2.13
SCAF11-210ENST00000547654 FAT3Q8TDW7 4589 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 TRAV30A0A087WSZ9 112 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 TEX49A0A1B0GTD5 131 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 SPINK8P0C7L1 97 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 XAF1Q6GPH4 301 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 KRTAP13-1Q8IUC0 172 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 SBSPONQ8IVN8 264 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 Q8N8P6 123 aa1.73□□□□□ -2.13
SCAF11-210ENST00000547654 LRP1Q07954 4544 aaKnown RBP1.72□□□□□ -2.13
SCAF11-210ENST00000547654 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
SCAF11-210ENST00000547654 UBA52P62987 128 aaKnown RBP1.72□□□□□ -2.13
SCAF11-210ENST00000547654 INSL4Q14641 139 aa1.72□□□□□ -2.13
SCAF11-210ENST00000547654 AQP10Q96PS8 301 aa1.72□□□□□ -2.13
SCAF11-210ENST00000547654 NCR3O14931 201 aa1.71□□□□□ -2.14
SCAF11-210ENST00000547654 Q6ZQY7 126 aa1.71□□□□□ -2.14
SCAF11-210ENST00000547654 C10orf82Q8WW14 230 aa1.71□□□□□ -2.14
SCAF11-210ENST00000547654 AMELYQ99218 206 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms