RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 S100A12P80511 92 aa10.89□□□□□ -0.67
CD9-211ENST00000546073 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
CD9-211ENST00000546073 KRTAP17-1Q9BYP8 105 aa10.89□□□□□ -0.67
CD9-211ENST00000546073 PSORS1C2Q9UIG4 136 aa10.89□□□□□ -0.67
CD9-211ENST00000546073 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
CD9-211ENST00000546073 ZNF815PA8K554 130 aa10.86□□□□□ -0.67
CD9-211ENST00000546073 SCGB1D1O95968 90 aa10.86□□□□□ -0.67
CD9-211ENST00000546073 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
CD9-211ENST00000546073 SPINK6Q6UWN8 80 aa10.86□□□□□ -0.67
CD9-211ENST00000546073 BOD1L2Q8IYS8 172 aa10.86□□□□□ -0.67
CD9-211ENST00000546073 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 J3QL48 77 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 SCGB1D4Q6XE38 83 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 DNAH8Q96JB1 4490 aa10.85□□□□□ -0.67
CD9-211ENST00000546073 C5orf52A6NGY3 159 aa10.84□□□□□ -0.67
CD9-211ENST00000546073 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
CD9-211ENST00000546073 LINC00167Q96N53 147 aa10.84□□□□□ -0.67
CD9-211ENST00000546073 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
CD9-211ENST00000546073 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
CD9-211ENST00000546073 RPL37AP8A6NKH3 93 aa10.82□□□□□ -0.68
CD9-211ENST00000546073 KRTAP10-4P60372 401 aaPredicted RBP10.82□□□□□ -0.68
CD9-211ENST00000546073 M0R378 163 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 OXTP01178 125 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 VPREB1P12018 145 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 KRTAP7-1Q8IUC3 87 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 DIRC1Q969H9 104 aa10.81□□□□□ -0.68
CD9-211ENST00000546073 IGKV2D-26A0A0A0MRZ7 120 aa10.8□□□□□ -0.68
CD9-211ENST00000546073 TIMM17BO60830 172 aa10.8□□□□□ -0.68
CD9-211ENST00000546073 IGKV2-28A0A075B6P5 120 aa10.79□□□□□ -0.68
CD9-211ENST00000546073 TMEM238C9JI98 176 aa10.79□□□□□ -0.68
CD9-211ENST00000546073 IGKV2D-28P01615 120 aa10.79□□□□□ -0.68
CD9-211ENST00000546073 RPL28P46779 137 aaKnown RBP10.79□□□□□ -0.68
CD9-211ENST00000546073 DAND5Q8N907 189 aa10.79□□□□□ -0.68
CD9-211ENST00000546073 SRRM2Q9UQ35 2752 aaKnown RBP10.78□□□□□ -0.68
CD9-211ENST00000546073 UBE2AP49459 152 aa10.78□□□□□ -0.68
CD9-211ENST00000546073 CBY1Q9Y3M2 126 aa10.78□□□□□ -0.68
CD9-211ENST00000546073 BCE1O60756 84 aa10.77□□□□□ -0.69
CD9-211ENST00000546073 NCR3O14931 201 aa10.76□□□□□ -0.69
CD9-211ENST00000546073 HNRNPA3P51991 378 aaKnown RBP10.76□□□□□ -0.69
CD9-211ENST00000546073 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
CD9-211ENST00000546073 S100A7L2Q5SY68 101 aa10.76□□□□□ -0.69
CD9-211ENST00000546073 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
CD9-211ENST00000546073 KRTAP29-1A8MX34 341 aaPredicted RBP10.75□□□□□ -0.69
CD9-211ENST00000546073 NPC2P61916 151 aa10.75□□□□□ -0.69
CD9-211ENST00000546073 SPANXB1Q9NS25 103 aaPredicted RBP10.75□□□□□ -0.69
CD9-211ENST00000546073 TMA7Q9Y2S6 64 aaKnown RBP10.75□□□□□ -0.69
CD9-211ENST00000546073 LOC107984156A0A0G2JMH3 177 aa10.74□□□□□ -0.69
CD9-211ENST00000546073 ZNF861PO60384 105 aa10.74□□□□□ -0.69
CD9-211ENST00000546073 NDUFC2O95298 119 aa10.74□□□□□ -0.69
CD9-211ENST00000546073 Q6ZVH6 145 aa10.74□□□□□ -0.69
CD9-211ENST00000546073 ARL17AQ8IVW1 177 aa10.74□□□□□ -0.69
CD9-211ENST00000546073 TRBV10-2A0A0K0K1G8 114 aa10.73□□□□□ -0.69
CD9-211ENST00000546073 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.69
CD9-211ENST00000546073 FAT1Q14517 4588 aa10.73□□□□□ -0.69
CD9-211ENST00000546073 FAM19A1Q7Z5A9 133 aa10.72□□□□□ -0.69
CD9-211ENST00000546073 KRTAP11-1Q8IUC1 163 aa10.72□□□□□ -0.69
CD9-211ENST00000546073 ADAMTSL4-AS1Q5T5F5 129 aa10.71□□□□□ -0.69
CD9-211ENST00000546073 LINC00518Q8N0U6 118 aa10.71□□□□□ -0.69
CD9-211ENST00000546073 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.69
CD9-211ENST00000546073 TTTY13Q9BZ97 58 aa10.71□□□□□ -0.69
CD9-211ENST00000546073 H0Y9J4 135 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 PRYO14603 147 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 IFITM1P13164 125 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 DDTP30046 118 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 TMEM126AQ9H061 195 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 SPANXCQ9NY87 97 aa10.7□□□□□ -0.7
CD9-211ENST00000546073 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
CD9-211ENST00000546073 HINT1P49773 126 aaPredicted RBP10.69□□□□□ -0.7
CD9-211ENST00000546073 PCP2Q8IVA1 136 aa10.69□□□□□ -0.7
CD9-211ENST00000546073 OR13C6PQ8NH95 151 aa10.69□□□□□ -0.7
CD9-211ENST00000546073 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
CD9-211ENST00000546073 SPANXDQ9BXN6 97 aa10.68□□□□□ -0.7
CD9-211ENST00000546073 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
CD9-211ENST00000546073 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
CD9-211ENST00000546073 JOSD1Q15040 202 aaPredicted RBP10.66□□□□□ -0.7
CD9-211ENST00000546073 Q8NDZ9 215 aa10.66□□□□□ -0.7
CD9-211ENST00000546073 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
CD9-211ENST00000546073 PCLOQ9Y6V0 5065 aa10.65□□□□□ -0.7
CD9-211ENST00000546073 LITAFQ99732 161 aa10.65□□□□□ -0.7
CD9-211ENST00000546073 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
CD9-211ENST00000546073 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
CD9-211ENST00000546073 LINC01600Q96MT4 127 aa10.64□□□□□ -0.71
CD9-211ENST00000546073 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
CD9-211ENST00000546073 PRLHP81277 87 aa10.62□□□□□ -0.71
CD9-211ENST00000546073 SPATA45Q537H7 98 aa10.62□□□□□ -0.71
CD9-211ENST00000546073 SOSTDC1Q6X4U4 206 aa10.62□□□□□ -0.71
CD9-211ENST00000546073 LINC00337Q8N6G1 96 aa10.62□□□□□ -0.71
CD9-211ENST00000546073 PPDPFQ9H3Y8 114 aa10.62□□□□□ -0.71
CD9-211ENST00000546073 TRAV23DV6A0A075B6W5 121 aa10.61□□□□□ -0.71
CD9-211ENST00000546073 COX8AP10176 69 aa10.61□□□□□ -0.71
CD9-211ENST00000546073 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
CD9-211ENST00000546073 RPL13AP40429 203 aaKnown RBP10.6□□□□□ -0.71
CD9-211ENST00000546073 MUSTN1Q8IVN3 82 aa10.6□□□□□ -0.71
CD9-211ENST00000546073 HIST1H4GQ99525 98 aa10.6□□□□□ -0.71
CD9-211ENST00000546073 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
CD9-211ENST00000546073 A6NDN8 102 aa10.59□□□□□ -0.71
CD9-211ENST00000546073 IGLV6-57P01721 117 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms