RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
CIT-216ENST00000544872 C9orf116Q5BN46 136 aaPredicted RBP6.03□□□□□ -1.44
CIT-216ENST00000544872 LINC01545Q5VT33 79 aa6.03□□□□□ -1.44
CIT-216ENST00000544872 ERG28Q9UKR5 140 aa6.03□□□□□ -1.44
CIT-216ENST00000544872 UBE2BP63146 152 aa6.02□□□□□ -1.45
CIT-216ENST00000544872 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
CIT-216ENST00000544872 ZNF625Q96I27 306 aaPredicted RBP6.02□□□□□ -1.45
CIT-216ENST00000544872 MIEN1Q9BRT3 115 aa6.02□□□□□ -1.45
CIT-216ENST00000544872 E9PLD3 99 aa6.01□□□□□ -1.45
CIT-216ENST00000544872 S100A12P80511 92 aa6.01□□□□□ -1.45
CIT-216ENST00000544872 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
CIT-216ENST00000544872 HIST3H2BBQ8N257 126 aa6.01□□□□□ -1.45
CIT-216ENST00000544872 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
CIT-216ENST00000544872 PANO1I0J062 215 aa6□□□□□ -1.45
CIT-216ENST00000544872 COPS9Q8WXC6 57 aa6□□□□□ -1.45
CIT-216ENST00000544872 HIST1H2BLQ99880 126 aa6□□□□□ -1.45
CIT-216ENST00000544872 M0QXV9 152 aa5.99□□□□□ -1.45
CIT-216ENST00000544872 SCGB1D1O95968 90 aa5.99□□□□□ -1.45
CIT-216ENST00000544872 A0A0U1RRA0 63 aa5.98□□□□□ -1.45
CIT-216ENST00000544872 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
CIT-216ENST00000544872 C5orf52A6NGY3 159 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 SMIM13P0DJ93 91 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 TP73-AS1Q9UF72 201 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
CIT-216ENST00000544872 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
CIT-216ENST00000544872 C9orf129Q5T035 196 aaKnown RBP5.96□□□□□ -1.46
CIT-216ENST00000544872 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
CIT-216ENST00000544872 CBY1Q9Y3M2 126 aa5.96□□□□□ -1.46
CIT-216ENST00000544872 FAM168BA1KXE4 195 aa5.95□□□□□ -1.46
CIT-216ENST00000544872 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
CIT-216ENST00000544872 BOD1L2Q8IYS8 172 aa5.95□□□□□ -1.46
CIT-216ENST00000544872 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
CIT-216ENST00000544872 TMEM238C9JI98 176 aa5.94□□□□□ -1.46
CIT-216ENST00000544872 C1orf137Q5JT78 98 aa5.94□□□□□ -1.46
CIT-216ENST00000544872 ATOH7Q8N100 152 aa5.94□□□□□ -1.46
CIT-216ENST00000544872 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
CIT-216ENST00000544872 IGKV2D-26A0A0A0MRZ7 120 aa5.93□□□□□ -1.46
CIT-216ENST00000544872 A0A0J9YXY3 114 aa5.93□□□□□ -1.46
CIT-216ENST00000544872 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
CIT-216ENST00000544872 M0R378 163 aa5.93□□□□□ -1.46
CIT-216ENST00000544872 TIMM17BO60830 172 aa5.93□□□□□ -1.46
CIT-216ENST00000544872 TMA7Q9Y2S6 64 aaKnown RBP5.93□□□□□ -1.46
CIT-216ENST00000544872 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 GAGE10A6NGK3 116 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 PRR3P79522 188 aaKnown RBP5.92□□□□□ -1.46
CIT-216ENST00000544872 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 SPINK6Q6UWN8 80 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 Q6ZVH6 145 aa5.92□□□□□ -1.46
CIT-216ENST00000544872 S100A7L2Q5SY68 101 aa5.91□□□□□ -1.46
CIT-216ENST00000544872 LINC00167Q96N53 147 aa5.91□□□□□ -1.46
CIT-216ENST00000544872 PSORS1C2Q9UIG4 136 aa5.91□□□□□ -1.46
CIT-216ENST00000544872 RPL37AP8A6NKH3 93 aa5.9□□□□□ -1.46
CIT-216ENST00000544872 RPL28P46779 137 aaKnown RBP5.9□□□□□ -1.46
CIT-216ENST00000544872 HINT1P49773 126 aaPredicted RBP5.9□□□□□ -1.46
CIT-216ENST00000544872 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
CIT-216ENST00000544872 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
CIT-216ENST00000544872 DIRC1Q969H9 104 aa5.9□□□□□ -1.46
CIT-216ENST00000544872 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 NDUFC2O95298 119 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 VPREB1P12018 145 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 IFITM1P13164 125 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 UBE2AP49459 152 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
CIT-216ENST00000544872 JOSD1Q15040 202 aaPredicted RBP5.89□□□□□ -1.47
CIT-216ENST00000544872 LCE2AQ5TA79 106 aaPredicted RBP5.89□□□□□ -1.47
CIT-216ENST00000544872 DAND5Q8N907 189 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 VAMP8Q9BV40 100 aa5.89□□□□□ -1.47
CIT-216ENST00000544872 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
CIT-216ENST00000544872 IGKV2-28A0A075B6P5 120 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 BCE1O60756 84 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 IGKV2D-28P01615 120 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
CIT-216ENST00000544872 NCR3O14931 201 aa5.87□□□□□ -1.47
CIT-216ENST00000544872 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
CIT-216ENST00000544872 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
CIT-216ENST00000544872 TNXBP22105 4242 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 ZNF861PO60384 105 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 DDTP30046 118 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 NPC2P61916 151 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 PCP2Q8IVA1 136 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 LINC00308Q8TCZ7 52 aa5.86□□□□□ -1.47
CIT-216ENST00000544872 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 PRYO14603 147 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
CIT-216ENST00000544872 FAM19A1Q7Z5A9 133 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 KRTAP7-1Q8IUC3 87 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 SPANXDQ9BXN6 97 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 PAM16Q9Y3D7 125 aa5.85□□□□□ -1.47
CIT-216ENST00000544872 SPATA45Q537H7 98 aa5.84□□□□□ -1.47
CIT-216ENST00000544872 HIST1H4GQ99525 98 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms