RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 APLNQ9ULZ1 77 aa13.85□□□□□ -0.19
BPTF-208ENST00000544778 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
BPTF-208ENST00000544778 C8orf87E5RJ46 101 aa13.84□□□□□ -0.19
BPTF-208ENST00000544778 A0A1W2PPR1 153 aa13.84□□□□□ -0.19
BPTF-208ENST00000544778 TRAV22A0A0B4J277 110 aa13.83□□□□□ -0.19
BPTF-208ENST00000544778 LINC00310P59036 64 aa13.83□□□□□ -0.2
BPTF-208ENST00000544778 PRO3102Q9H379 93 aa13.82□□□□□ -0.2
BPTF-208ENST00000544778 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
BPTF-208ENST00000544778 LRRK2Q5S007 2527 aa13.81□□□□□ -0.2
BPTF-208ENST00000544778 C2CD3Q4AC94 2353 aa13.8□□□□□ -0.2
BPTF-208ENST00000544778 ST20-AS1Q8NBB2 130 aa13.78□□□□□ -0.2
BPTF-208ENST00000544778 NBDYA0A0U1RRE5 68 aa13.77□□□□□ -0.21
BPTF-208ENST00000544778 C11orf72Q8NBR9 251 aa13.77□□□□□ -0.21
BPTF-208ENST00000544778 ELOF1P60002 83 aaKnown RBP13.76□□□□□ -0.21
BPTF-208ENST00000544778 C4orf26Q17RF5 130 aa13.76□□□□□ -0.21
BPTF-208ENST00000544778 A0A096LNJ9 63 aa13.75□□□□□ -0.21
BPTF-208ENST00000544778 Q6ZRX8 168 aa13.73□□□□□ -0.21
BPTF-208ENST00000544778 COX8CQ7Z4L0 72 aa13.72□□□□□ -0.21
BPTF-208ENST00000544778 PRO0628Q9UI54 55 aa13.72□□□□□ -0.21
BPTF-208ENST00000544778 IGHV3OR16-9A0A0B4J2B5 98 aa13.71□□□□□ -0.21
BPTF-208ENST00000544778 BCE1O60756 84 aa13.7□□□□□ -0.22
BPTF-208ENST00000544778 C9orf92A6NGG3 77 aa13.7□□□□□ -0.22
BPTF-208ENST00000544778 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
BPTF-208ENST00000544778 CRIPTQ9P021 101 aa13.69□□□□□ -0.22
BPTF-208ENST00000544778 LINC01600Q96MT4 127 aa13.69□□□□□ -0.22
BPTF-208ENST00000544778 VPREB1P12018 145 aa13.68□□□□□ -0.22
BPTF-208ENST00000544778 LINC00588Q9Y4M8 146 aa13.68□□□□□ -0.22
BPTF-208ENST00000544778 Q6ZQT0 140 aa13.68□□□□□ -0.22
BPTF-208ENST00000544778 FAM218AQ96MZ4 157 aa13.68□□□□□ -0.22
BPTF-208ENST00000544778 H3BPC8 53 aa13.67□□□□□ -0.22
BPTF-208ENST00000544778 FAM168BA1KXE4 195 aa13.66□□□□□ -0.22
BPTF-208ENST00000544778 MYO9AB2RTY4 2548 aa13.65□□□□□ -0.22
BPTF-208ENST00000544778 NAV2Q8IVL1 2488 aa13.65□□□□□ -0.22
BPTF-208ENST00000544778 PIEZO2Q9H5I5 2752 aa13.65□□□□□ -0.22
BPTF-208ENST00000544778 TM2D3Q9BRN9 247 aa13.64□□□□□ -0.23
BPTF-208ENST00000544778 CDIP1Q9H305 208 aa13.64□□□□□ -0.23
BPTF-208ENST00000544778 WWC2-AS2Q96NR7 200 aa13.64□□□□□ -0.23
BPTF-208ENST00000544778 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
BPTF-208ENST00000544778 H3BNG1 76 aa13.63□□□□□ -0.23
BPTF-208ENST00000544778 KRTAP24-1Q3LI83 254 aa13.63□□□□□ -0.23
BPTF-208ENST00000544778 IGLV6-57P01721 117 aa13.62□□□□□ -0.23
BPTF-208ENST00000544778 DSCR10P59022 87 aa13.61□□□□□ -0.23
BPTF-208ENST00000544778 LOC101927531A0A1B0GV80 90 aa13.6□□□□□ -0.23
BPTF-208ENST00000544778 A0A1B0GW54 56 aa13.59□□□□□ -0.23
BPTF-208ENST00000544778 LINC01554Q52M75 96 aa13.59□□□□□ -0.23
BPTF-208ENST00000544778 TTC28Q96AY4 2481 aa13.58□□□□□ -0.24
BPTF-208ENST00000544778 MRPL34Q9BQ48 92 aaKnown RBP13.58□□□□□ -0.24
BPTF-208ENST00000544778 TRBV7-4A0A0J9YYF1 115 aa13.57□□□□□ -0.24
BPTF-208ENST00000544778 A8MWP4 228 aa13.57□□□□□ -0.24
BPTF-208ENST00000544778 OBSCN-AS1Q96MR7 158 aa13.57□□□□□ -0.24
BPTF-208ENST00000544778 LOC110117498A0A087WWA1 95 aa13.57□□□□□ -0.24
BPTF-208ENST00000544778 COA5Q86WW8 74 aa13.55□□□□□ -0.24
BPTF-208ENST00000544778 C9orf129Q5T035 196 aaKnown RBP13.54□□□□□ -0.24
BPTF-208ENST00000544778 LINC00304Q8N9R0 145 aa13.54□□□□□ -0.24
BPTF-208ENST00000544778 K7EQZ3 153 aa13.53□□□□□ -0.24
BPTF-208ENST00000544778 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
BPTF-208ENST00000544778 ZFYVE26Q68DK2 2539 aa13.53□□□□□ -0.24
BPTF-208ENST00000544778 LINC01546A6NGU7 62 aa13.51□□□□□ -0.25
BPTF-208ENST00000544778 UQCR11O14957 56 aa13.51□□□□□ -0.25
BPTF-208ENST00000544778 SMR3BP02814 79 aaPredicted RBP13.51□□□□□ -0.25
BPTF-208ENST00000544778 IGLV5-37A0A075B6J1 123 aa13.51□□□□□ -0.25
BPTF-208ENST00000544778 FN1P02751 2386 aaKnown RBP13.5□□□□□ -0.25
BPTF-208ENST00000544778 Q8NAQ8 132 aa13.5□□□□□ -0.25
BPTF-208ENST00000544778 RBM12B-AS1Q9P1G2 102 aa13.47□□□□□ -0.25
BPTF-208ENST00000544778 MIR22HGQ0VDD5 57 aa13.47□□□□□ -0.25
BPTF-208ENST00000544778 A0A0D9SG42 100 aa13.46□□□□□ -0.25
BPTF-208ENST00000544778 SRCAPQ6ZRS2 3230 aa13.46□□□□□ -0.25
BPTF-208ENST00000544778 IGLV5-45A0A087WSX0 123 aa13.45□□□□□ -0.26
BPTF-208ENST00000544778 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
BPTF-208ENST00000544778 SMCPP49901 116 aaPredicted RBP13.44□□□□□ -0.26
BPTF-208ENST00000544778 A8MUN3 132 aa13.42□□□□□ -0.26
BPTF-208ENST00000544778 TLN1Q9Y490 2541 aaKnown RBP13.37□□□□□ -0.27
BPTF-208ENST00000544778 IGF2RP11717 2491 aa13.36□□□□□ -0.27
BPTF-208ENST00000544778 RPS28P62857 69 aaKnown RBP13.36□□□□□ -0.27
BPTF-208ENST00000544778 IGLV1-50A0A075B6I6 118 aa13.35□□□□□ -0.27
BPTF-208ENST00000544778 C8orf17Q9NRJ1 99 aa13.35□□□□□ -0.27
BPTF-208ENST00000544778 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
BPTF-208ENST00000544778 IGFL1Q6UW32 110 aa13.34□□□□□ -0.27
BPTF-208ENST00000544778 COL4A2P08572 1712 aa13.34□□□□□ -0.27
BPTF-208ENST00000544778 ANAPC11Q9NYG5 84 aa13.34□□□□□ -0.27
BPTF-208ENST00000544778 PCSK5Q92824 1860 aa13.31□□□□□ -0.28
BPTF-208ENST00000544778 ZNF861PO60384 105 aa13.31□□□□□ -0.28
BPTF-208ENST00000544778 A0A1B0GVX0 72 aa13.3□□□□□ -0.28
BPTF-208ENST00000544778 CYP4F30PQ9H0H9 118 aa13.3□□□□□ -0.28
BPTF-208ENST00000544778 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
BPTF-208ENST00000544778 ABCA12Q86UK0 2595 aa13.29□□□□□ -0.28
BPTF-208ENST00000544778 WDR87Q6ZQQ6 2873 aa13.29□□□□□ -0.28
BPTF-208ENST00000544778 A0A0G2JQZ4 141 aa13.29□□□□□ -0.28
BPTF-208ENST00000544778 A0A1W2PNN7 141 aa13.29□□□□□ -0.28
BPTF-208ENST00000544778 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
BPTF-208ENST00000544778 CDC42SE1Q9NRR8 79 aa13.26□□□□□ -0.29
BPTF-208ENST00000544778 PRR15Q8IV56 129 aa13.25□□□□□ -0.29
BPTF-208ENST00000544778 C15orf56Q8N910 161 aa13.25□□□□□ -0.29
BPTF-208ENST00000544778 LUZP6Q538Z0 58 aa13.24□□□□□ -0.29
BPTF-208ENST00000544778 PRO0461Q9UI25 63 aa13.24□□□□□ -0.29
BPTF-208ENST00000544778 IGLV5-48A0A075B6I7 105 aa13.23□□□□□ -0.29
BPTF-208ENST00000544778 CSNK1G2-AS1Q8NCQ2 148 aa13.23□□□□□ -0.29
BPTF-208ENST00000544778 Q8N1X5 172 aa13.23□□□□□ -0.29
BPTF-208ENST00000544778 KCNQ1DNQ9H478 68 aa13.23□□□□□ -0.29
BPTF-208ENST00000544778 K7EIL1 84 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms