RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
DDX55-212ENST00000544738 SCO1O75880 301 aa9.55□□□□□ -0.88
DDX55-212ENST00000544738 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
DDX55-212ENST00000544738 CRCT1Q9UGL9 99 aa9.54□□□□□ -0.88
DDX55-212ENST00000544738 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
DDX55-212ENST00000544738 YPEL4Q96NS1 127 aa9.53□□□□□ -0.88
DDX55-212ENST00000544738 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
DDX55-212ENST00000544738 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
DDX55-212ENST00000544738 TSPAN13O95857 204 aa9.52□□□□□ -0.89
DDX55-212ENST00000544738 LINC00158P58513 81 aa9.52□□□□□ -0.89
DDX55-212ENST00000544738 FAM19A1Q7Z5A9 133 aa9.52□□□□□ -0.89
DDX55-212ENST00000544738 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
DDX55-212ENST00000544738 TMEM238C9JI98 176 aa9.5□□□□□ -0.89
DDX55-212ENST00000544738 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
DDX55-212ENST00000544738 M0R378 163 aa9.49□□□□□ -0.89
DDX55-212ENST00000544738 HSBP1O75506 76 aa9.49□□□□□ -0.89
DDX55-212ENST00000544738 PRLHP81277 87 aa9.49□□□□□ -0.89
DDX55-212ENST00000544738 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
DDX55-212ENST00000544738 Q8NDZ9 215 aa9.48□□□□□ -0.89
DDX55-212ENST00000544738 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
DDX55-212ENST00000544738 LINC00587B1AMM8 73 aa9.47□□□□□ -0.89
DDX55-212ENST00000544738 HERV-K104P63124 156 aa9.47□□□□□ -0.89
DDX55-212ENST00000544738 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
DDX55-212ENST00000544738 A0A0U1RRA0 63 aa9.46□□□□□ -0.9
DDX55-212ENST00000544738 CBLN2Q8IUK8 224 aa9.46□□□□□ -0.9
DDX55-212ENST00000544738 MUC17Q685J3 4493 aa9.45□□□□□ -0.9
DDX55-212ENST00000544738 MEIG1Q5JSS6 88 aa9.45□□□□□ -0.9
DDX55-212ENST00000544738 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
DDX55-212ENST00000544738 PLEKHB2Q96CS7 222 aa9.45□□□□□ -0.9
DDX55-212ENST00000544738 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
DDX55-212ENST00000544738 CTAG1AP78358 180 aa9.44□□□□□ -0.9
DDX55-212ENST00000544738 LINC00304Q8N9R0 145 aa9.44□□□□□ -0.9
DDX55-212ENST00000544738 MYMXA0A1B0GTQ4 84 aa9.43□□□□□ -0.9
DDX55-212ENST00000544738 BOD1L2Q8IYS8 172 aa9.43□□□□□ -0.9
DDX55-212ENST00000544738 HIGD2AQ9BW72 106 aa9.43□□□□□ -0.9
DDX55-212ENST00000544738 MAP1LC3CQ9BXW4 147 aa9.43□□□□□ -0.9
DDX55-212ENST00000544738 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
DDX55-212ENST00000544738 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
DDX55-212ENST00000544738 TRGC2P03986 189 aa9.42□□□□□ -0.9
DDX55-212ENST00000544738 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
DDX55-212ENST00000544738 H0Y8G0 127 aa9.41□□□□□ -0.9
DDX55-212ENST00000544738 PRYO14603 147 aa9.4□□□□□ -0.9
DDX55-212ENST00000544738 SERF1AO75920 110 aa9.39□□□□□ -0.91
DDX55-212ENST00000544738 PLNP26678 52 aa9.39□□□□□ -0.91
DDX55-212ENST00000544738 KCNQ1DNQ9H478 68 aa9.39□□□□□ -0.91
DDX55-212ENST00000544738 ZNF706Q9Y5V0 76 aaPredicted RBP9.39□□□□□ -0.91
DDX55-212ENST00000544738 S100A12P80511 92 aa9.38□□□□□ -0.91
DDX55-212ENST00000544738 LINC00337Q8N6G1 96 aa9.38□□□□□ -0.91
DDX55-212ENST00000544738 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
DDX55-212ENST00000544738 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
DDX55-212ENST00000544738 NCR3O14931 201 aa9.37□□□□□ -0.91
DDX55-212ENST00000544738 LEPROTO15243 131 aa9.37□□□□□ -0.91
DDX55-212ENST00000544738 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
DDX55-212ENST00000544738 SPRR1AP35321 89 aa9.36□□□□□ -0.91
DDX55-212ENST00000544738 LINC00310P59036 64 aa9.36□□□□□ -0.91
DDX55-212ENST00000544738 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 ETDCA0A1B0GVM5 59 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 DPM2O94777 84 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 HERVK_113P61574 105 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 C3orf22Q8N5N4 141 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
DDX55-212ENST00000544738 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
DDX55-212ENST00000544738 J3QQQ9 107 aa9.34□□□□□ -0.91
DDX55-212ENST00000544738 FABP4P15090 132 aa9.34□□□□□ -0.91
DDX55-212ENST00000544738 NMUP48645 174 aa9.34□□□□□ -0.91
DDX55-212ENST00000544738 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
DDX55-212ENST00000544738 TRBV10-2A0A0K0K1G8 114 aa9.32□□□□□ -0.92
DDX55-212ENST00000544738 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
DDX55-212ENST00000544738 IGKCP01834 107 aa9.32□□□□□ -0.92
DDX55-212ENST00000544738 LINC01547P58512 204 aaPredicted RBP9.32□□□□□ -0.92
DDX55-212ENST00000544738 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
DDX55-212ENST00000544738 MIEN1Q9BRT3 115 aa9.32□□□□□ -0.92
DDX55-212ENST00000544738 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
DDX55-212ENST00000544738 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
DDX55-212ENST00000544738 DAND5Q8N907 189 aa9.31□□□□□ -0.92
DDX55-212ENST00000544738 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
DDX55-212ENST00000544738 COLCA2A8K830 154 aa9.3□□□□□ -0.92
DDX55-212ENST00000544738 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
DDX55-212ENST00000544738 PMCHL2Q9BQD1 86 aa9.3□□□□□ -0.92
DDX55-212ENST00000544738 DDTP30046 118 aa9.29□□□□□ -0.92
DDX55-212ENST00000544738 SLC7A5P1Q8MH63 180 aa9.29□□□□□ -0.92
DDX55-212ENST00000544738 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
DDX55-212ENST00000544738 NDUFC2O95298 119 aa9.28□□□□□ -0.92
DDX55-212ENST00000544738 B5MCH6 92 aa9.27□□□□□ -0.93
DDX55-212ENST00000544738 PPDPFQ9H3Y8 114 aa9.27□□□□□ -0.93
DDX55-212ENST00000544738 LINC00483Q53H64 154 aa9.26□□□□□ -0.93
DDX55-212ENST00000544738 S100A7L2Q5SY68 101 aa9.26□□□□□ -0.93
DDX55-212ENST00000544738 Q8NBF4 154 aa9.25□□□□□ -0.93
DDX55-212ENST00000544738 E9PLD3 99 aa9.24□□□□□ -0.93
DDX55-212ENST00000544738 SPINK1P00995 79 aa9.24□□□□□ -0.93
DDX55-212ENST00000544738 IGLV6-57P01721 117 aa9.24□□□□□ -0.93
DDX55-212ENST00000544738 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
DDX55-212ENST00000544738 Q6ZRX8 168 aa9.24□□□□□ -0.93
DDX55-212ENST00000544738 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
DDX55-212ENST00000544738 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
DDX55-212ENST00000544738 A0A0J9YXY3 114 aa9.22□□□□□ -0.93
DDX55-212ENST00000544738 CBY1Q9Y3M2 126 aa9.22□□□□□ -0.93
DDX55-212ENST00000544738 SYS1-DBNDD2H3BUS1 97 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms