RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 IGKV2D-26A0A0A0MRZ7 120 aa9.36□□□□□ -0.91
CD9-210ENST00000543916 NMUP48645 174 aa9.36□□□□□ -0.91
CD9-210ENST00000543916 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
CD9-210ENST00000543916 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
CD9-210ENST00000543916 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
CD9-210ENST00000543916 Q8NDZ9 215 aa9.34□□□□□ -0.91
CD9-210ENST00000543916 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
CD9-210ENST00000543916 IGLV5-37A0A075B6J1 123 aa9.33□□□□□ -0.92
CD9-210ENST00000543916 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
CD9-210ENST00000543916 MIR7-3HGQ8N6C7 128 aa9.33□□□□□ -0.92
CD9-210ENST00000543916 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
CD9-210ENST00000543916 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 VPREB1P12018 145 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 AKR1D1P51857 326 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 UBE2BP63146 152 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 MRPL55Q7Z7F7 128 aaKnown RBP9.32□□□□□ -0.92
CD9-210ENST00000543916 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 PKHD1L1Q86WI1 4243 aa9.32□□□□□ -0.92
CD9-210ENST00000543916 A0A0J9YXY3 114 aa9.31□□□□□ -0.92
CD9-210ENST00000543916 DAND5Q8N907 189 aa9.31□□□□□ -0.92
CD9-210ENST00000543916 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
CD9-210ENST00000543916 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
CD9-210ENST00000543916 LINC00167Q96N53 147 aa9.3□□□□□ -0.92
CD9-210ENST00000543916 GAGE10A6NGK3 116 aa9.29□□□□□ -0.92
CD9-210ENST00000543916 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
CD9-210ENST00000543916 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
CD9-210ENST00000543916 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
CD9-210ENST00000543916 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
CD9-210ENST00000543916 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
CD9-210ENST00000543916 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
CD9-210ENST00000543916 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
CD9-210ENST00000543916 BOD1L2Q8IYS8 172 aa9.27□□□□□ -0.93
CD9-210ENST00000543916 LITAFQ99732 161 aa9.27□□□□□ -0.93
CD9-210ENST00000543916 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
CD9-210ENST00000543916 LOC107984156A0A0G2JMH3 177 aa9.25□□□□□ -0.93
CD9-210ENST00000543916 SRSF9Q13242 221 aaKnown RBP eCLIP9.25□□□□□ -0.93
CD9-210ENST00000543916 PCP2Q8IVA1 136 aa9.25□□□□□ -0.93
CD9-210ENST00000543916 ARL17AQ8IVW1 177 aa9.25□□□□□ -0.93
CD9-210ENST00000543916 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
CD9-210ENST00000543916 EIF4EBP3O60516 100 aaPredicted RBP9.24□□□□□ -0.93
CD9-210ENST00000543916 TIMM17BO60830 172 aa9.24□□□□□ -0.93
CD9-210ENST00000543916 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
CD9-210ENST00000543916 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
CD9-210ENST00000543916 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
CD9-210ENST00000543916 NCR3O14931 201 aa9.23□□□□□ -0.93
CD9-210ENST00000543916 NPC2P61916 151 aa9.23□□□□□ -0.93
CD9-210ENST00000543916 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
CD9-210ENST00000543916 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
CD9-210ENST00000543916 HSBP1L1C9JCN9 74 aa9.22□□□□□ -0.93
CD9-210ENST00000543916 M0R378 163 aa9.22□□□□□ -0.93
CD9-210ENST00000543916 SPINK6Q6UWN8 80 aa9.22□□□□□ -0.93
CD9-210ENST00000543916 SCGB1D4Q6XE38 83 aa9.21□□□□□ -0.94
CD9-210ENST00000543916 MIEN1Q9BRT3 115 aa9.21□□□□□ -0.94
CD9-210ENST00000543916 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
CD9-210ENST00000543916 TMEM238C9JI98 176 aa9.19□□□□□ -0.94
CD9-210ENST00000543916 BCE1O60756 84 aa9.19□□□□□ -0.94
CD9-210ENST00000543916 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
CD9-210ENST00000543916 LRP1Q07954 4544 aaKnown RBP9.19□□□□□ -0.94
CD9-210ENST00000543916 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
CD9-210ENST00000543916 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
CD9-210ENST00000543916 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
CD9-210ENST00000543916 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
CD9-210ENST00000543916 NDUFC2O95298 119 aa9.17□□□□□ -0.94
CD9-210ENST00000543916 TMEM126AQ9H061 195 aa9.17□□□□□ -0.94
CD9-210ENST00000543916 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
CD9-210ENST00000543916 TRBV10-2A0A0K0K1G8 114 aa9.16□□□□□ -0.94
CD9-210ENST00000543916 REG3GQ6UW15 175 aa9.16□□□□□ -0.94
CD9-210ENST00000543916 TRBV10-3A0A0K0K1G6 114 aa9.15□□□□□ -0.94
CD9-210ENST00000543916 H0Y9J4 135 aa9.15□□□□□ -0.94
CD9-210ENST00000543916 ZNF861PO60384 105 aa9.15□□□□□ -0.94
CD9-210ENST00000543916 OXTP01178 125 aa9.15□□□□□ -0.94
CD9-210ENST00000543916 DIRC1Q969H9 104 aa9.15□□□□□ -0.94
CD9-210ENST00000543916 KRTAP13-1Q8IUC0 172 aa9.14□□□□□ -0.95
CD9-210ENST00000543916 PAM16Q9Y3D7 125 aa9.14□□□□□ -0.95
CD9-210ENST00000543916 PRYO14603 147 aa9.13□□□□□ -0.95
CD9-210ENST00000543916 DDTP30046 118 aa9.13□□□□□ -0.95
CD9-210ENST00000543916 PYY3Q5JQD4 70 aa9.13□□□□□ -0.95
CD9-210ENST00000543916 COX8AP10176 69 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
CD9-210ENST00000543916 UBE2AP49459 152 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 SPATA45Q537H7 98 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
CD9-210ENST00000543916 J3QL48 77 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 IGLV6-57P01721 117 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 IFITM1P13164 125 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 PRLHP81277 87 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
CD9-210ENST00000543916 Q6ZVH6 145 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
CD9-210ENST00000543916 MT1HL1P0DM35 61 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 S100A7L2Q5SY68 101 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 C14orf144Q96I85 54 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 LINC01600Q96MT4 127 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 PPDPFQ9H3Y8 114 aa9.1□□□□□ -0.95
CD9-210ENST00000543916 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
CD9-210ENST00000543916 DLEU1O43261 78 aa9.08□□□□□ -0.96
CD9-210ENST00000543916 COPS9Q8WXC6 57 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms