RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 LGALS3P17931 250 aaKnown RBP11.04□□□□□ -0.64
TSFM-208ENST00000543727 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
TSFM-208ENST00000543727 S100A6P06703 90 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 LINC00158P58513 81 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 KRTDAPP60985 99 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 MEIG1Q5JSS6 88 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 C1orf137Q5JT78 98 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 NKAPP1Q8N9T2 125 aa11.03□□□□□ -0.64
TSFM-208ENST00000543727 TSPEAR-AS2P59090 65 aa11.02□□□□□ -0.65
TSFM-208ENST00000543727 S100A2P29034 98 aa11.01□□□□□ -0.65
TSFM-208ENST00000543727 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
TSFM-208ENST00000543727 HIST3H2BBQ8N257 126 aa11□□□□□ -0.65
TSFM-208ENST00000543727 IGLV7-43P04211 117 aa10.99□□□□□ -0.65
TSFM-208ENST00000543727 SMIM13P0DJ93 91 aa10.99□□□□□ -0.65
TSFM-208ENST00000543727 VPREB1P12018 145 aa10.99□□□□□ -0.65
TSFM-208ENST00000543727 J3QL48 77 aa10.98□□□□□ -0.65
TSFM-208ENST00000543727 REG3GQ6UW15 175 aa10.98□□□□□ -0.65
TSFM-208ENST00000543727 DMBT1Q9UGM3 2413 aaPredicted RBP10.98□□□□□ -0.65
TSFM-208ENST00000543727 KRTAP11-1Q8IUC1 163 aa10.97□□□□□ -0.65
TSFM-208ENST00000543727 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
TSFM-208ENST00000543727 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
TSFM-208ENST00000543727 MYCBP2O75592 4640 aa10.97□□□□□ -0.65
TSFM-208ENST00000543727 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.65
TSFM-208ENST00000543727 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
TSFM-208ENST00000543727 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
TSFM-208ENST00000543727 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
TSFM-208ENST00000543727 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
TSFM-208ENST00000543727 IGKV2D-26A0A0A0MRZ7 120 aa10.94□□□□□ -0.66
TSFM-208ENST00000543727 SNRPEP62304 92 aaKnown RBP10.94□□□□□ -0.66
TSFM-208ENST00000543727 PKHD1L1Q86WI1 4243 aa10.93□□□□□ -0.66
TSFM-208ENST00000543727 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
TSFM-208ENST00000543727 BCE1O60756 84 aa10.92□□□□□ -0.66
TSFM-208ENST00000543727 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
TSFM-208ENST00000543727 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 GAGE10A6NGK3 116 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 M0R378 163 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 TIMM17BO60830 172 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
TSFM-208ENST00000543727 H0Y9J4 135 aa10.9□□□□□ -0.66
TSFM-208ENST00000543727 ZNF861PO60384 105 aa10.9□□□□□ -0.66
TSFM-208ENST00000543727 LINC01600Q96MT4 127 aa10.9□□□□□ -0.66
TSFM-208ENST00000543727 C5orf52A6NGY3 159 aa10.89□□□□□ -0.67
TSFM-208ENST00000543727 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
TSFM-208ENST00000543727 RPL28P46779 137 aaKnown RBP10.89□□□□□ -0.67
TSFM-208ENST00000543727 Q8NDZ9 215 aa10.89□□□□□ -0.67
TSFM-208ENST00000543727 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
TSFM-208ENST00000543727 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
TSFM-208ENST00000543727 TRBV10-2A0A0K0K1G8 114 aa10.87□□□□□ -0.67
TSFM-208ENST00000543727 NDUFC2O95298 119 aa10.87□□□□□ -0.67
TSFM-208ENST00000543727 DAND5Q8N907 189 aa10.86□□□□□ -0.67
TSFM-208ENST00000543727 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
TSFM-208ENST00000543727 SPANXB1Q9NS25 103 aaPredicted RBP10.85□□□□□ -0.67
TSFM-208ENST00000543727 HSBP1L1C9JCN9 74 aa10.84□□□□□ -0.67
TSFM-208ENST00000543727 S100A12P80511 92 aa10.84□□□□□ -0.67
TSFM-208ENST00000543727 ANKRD39Q53RE8 183 aa10.84□□□□□ -0.67
TSFM-208ENST00000543727 TMEM126AQ9H061 195 aa10.84□□□□□ -0.67
TSFM-208ENST00000543727 PRYO14603 147 aa10.83□□□□□ -0.68
TSFM-208ENST00000543727 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
TSFM-208ENST00000543727 ADAMTSL4-AS1Q5T5F5 129 aa10.83□□□□□ -0.68
TSFM-208ENST00000543727 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
TSFM-208ENST00000543727 LITAFQ99732 161 aa10.83□□□□□ -0.68
TSFM-208ENST00000543727 TMEM238C9JI98 176 aa10.82□□□□□ -0.68
TSFM-208ENST00000543727 NCR3O14931 201 aa10.82□□□□□ -0.68
TSFM-208ENST00000543727 UBE2AP49459 152 aa10.82□□□□□ -0.68
TSFM-208ENST00000543727 SCGB1D4Q6XE38 83 aa10.82□□□□□ -0.68
TSFM-208ENST00000543727 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
TSFM-208ENST00000543727 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
TSFM-208ENST00000543727 KCNQ1DNQ9H478 68 aa10.81□□□□□ -0.68
TSFM-208ENST00000543727 LRP1Q07954 4544 aaKnown RBP10.81□□□□□ -0.68
TSFM-208ENST00000543727 Q6ZVH6 145 aa10.8□□□□□ -0.68
TSFM-208ENST00000543727 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
TSFM-208ENST00000543727 SOSTDC1Q6X4U4 206 aa10.79□□□□□ -0.68
TSFM-208ENST00000543727 LINC00308Q8TCZ7 52 aa10.79□□□□□ -0.68
TSFM-208ENST00000543727 SPANXDQ9BXN6 97 aa10.79□□□□□ -0.68
TSFM-208ENST00000543727 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
TSFM-208ENST00000543727 CBY1Q9Y3M2 126 aa10.79□□□□□ -0.68
TSFM-208ENST00000543727 FAM19A1Q7Z5A9 133 aa10.78□□□□□ -0.68
TSFM-208ENST00000543727 LINC00337Q8N6G1 96 aa10.78□□□□□ -0.68
TSFM-208ENST00000543727 TRBV10-3A0A0K0K1G6 114 aa10.77□□□□□ -0.69
TSFM-208ENST00000543727 SCGB1D1O95968 90 aa10.77□□□□□ -0.69
TSFM-208ENST00000543727 DDTP30046 118 aa10.77□□□□□ -0.69
TSFM-208ENST00000543727 SPRR1AP35321 89 aa10.77□□□□□ -0.69
TSFM-208ENST00000543727 KRTAP10-8P60410 259 aa10.77□□□□□ -0.69
TSFM-208ENST00000543727 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
TSFM-208ENST00000543727 KRTAP1-4P0C5Y4 121 aa10.76□□□□□ -0.69
TSFM-208ENST00000543727 IFITM1P13164 125 aa10.76□□□□□ -0.69
TSFM-208ENST00000543727 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
TSFM-208ENST00000543727 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
TSFM-208ENST00000543727 RPL13AP40429 203 aaKnown RBP10.75□□□□□ -0.69
TSFM-208ENST00000543727 NPC2P61916 151 aa10.75□□□□□ -0.69
TSFM-208ENST00000543727 S100A7L2Q5SY68 101 aa10.75□□□□□ -0.69
TSFM-208ENST00000543727 EIF4EBP3O60516 100 aaPredicted RBP10.73□□□□□ -0.69
TSFM-208ENST00000543727 PRLHP81277 87 aa10.73□□□□□ -0.69
TSFM-208ENST00000543727 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
TSFM-208ENST00000543727 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
TSFM-208ENST00000543727 KRTAP4-16G5E9R7 235 aaPredicted RBP10.72□□□□□ -0.69
TSFM-208ENST00000543727 TRAV23DV6A0A075B6W5 121 aa10.69□□□□□ -0.7
TSFM-208ENST00000543727 JOSD1Q15040 202 aaPredicted RBP10.68□□□□□ -0.7
TSFM-208ENST00000543727 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms