RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 RPL37AP61513 92 aaKnown RBP6.15□□□□□ -1.42
VEGFB-204ENST00000543462 PRR3P79522 188 aaKnown RBP6.15□□□□□ -1.42
VEGFB-204ENST00000543462 LBHQ53QV2 105 aaPredicted RBP6.15□□□□□ -1.42
VEGFB-204ENST00000543462 Q8NDZ9 215 aa6.15□□□□□ -1.42
VEGFB-204ENST00000543462 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
VEGFB-204ENST00000543462 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 HERVK_113P61574 105 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 HERV-K104P63124 156 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 PHF5AQ7RTV0 110 aaKnown RBP6.14□□□□□ -1.43
VEGFB-204ENST00000543462 FAM19A5Q7Z5A7 132 aaPredicted RBP6.14□□□□□ -1.43
VEGFB-204ENST00000543462 MIEN1Q9BRT3 115 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 SND1-IT1Q9HBX3 110 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 TP73-AS1Q9UF72 201 aa6.14□□□□□ -1.43
VEGFB-204ENST00000543462 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 M0QXV9 152 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 PFN2P35080 140 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 NMUP48645 174 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 DPH3Q96FX2 82 aa6.13□□□□□ -1.43
VEGFB-204ENST00000543462 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
VEGFB-204ENST00000543462 MYMXA0A1B0GTQ4 84 aa6.12□□□□□ -1.43
VEGFB-204ENST00000543462 HSBP1L1C9JCN9 74 aa6.12□□□□□ -1.43
VEGFB-204ENST00000543462 VPREB1P12018 145 aa6.12□□□□□ -1.43
VEGFB-204ENST00000543462 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
VEGFB-204ENST00000543462 LOC107984156A0A0G2JMH3 177 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 SPATA45Q537H7 98 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 ARL17AQ8IVW1 177 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 LITAFQ99732 161 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 PRO1933Q9H354 126 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 UQCR10Q9UDW1 63 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 PSORS1C2Q9UIG4 136 aa6.11□□□□□ -1.43
VEGFB-204ENST00000543462 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
VEGFB-204ENST00000543462 INAFM2P0DMQ5 153 aa6.1□□□□□ -1.43
VEGFB-204ENST00000543462 LGALS3P17931 250 aaKnown RBP6.1□□□□□ -1.43
VEGFB-204ENST00000543462 CTAG1AP78358 180 aa6.1□□□□□ -1.43
VEGFB-204ENST00000543462 PAM16Q9Y3D7 125 aa6.1□□□□□ -1.43
VEGFB-204ENST00000543462 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
VEGFB-204ENST00000543462 SRSF9Q13242 221 aaKnown RBP eCLIP6.09□□□□□ -1.43
VEGFB-204ENST00000543462 ATOH7Q8N100 152 aa6.09□□□□□ -1.43
VEGFB-204ENST00000543462 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
VEGFB-204ENST00000543462 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
VEGFB-204ENST00000543462 TTTY13Q9BZ97 58 aa6.09□□□□□ -1.43
VEGFB-204ENST00000543462 LINC00158P58513 81 aa6.08□□□□□ -1.44
VEGFB-204ENST00000543462 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
VEGFB-204ENST00000543462 MRPL55Q7Z7F7 128 aaKnown RBP6.08□□□□□ -1.44
VEGFB-204ENST00000543462 A0A0U1RRA0 63 aa6.07□□□□□ -1.44
VEGFB-204ENST00000543462 EIF4EBP3O60516 100 aaPredicted RBP6.07□□□□□ -1.44
VEGFB-204ENST00000543462 TIMM17BO60830 172 aa6.07□□□□□ -1.44
VEGFB-204ENST00000543462 ADAMTSL4-AS1Q5T5F5 129 aa6.07□□□□□ -1.44
VEGFB-204ENST00000543462 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
VEGFB-204ENST00000543462 LINC00167Q96N53 147 aa6.07□□□□□ -1.44
VEGFB-204ENST00000543462 DLEU1O43261 78 aa6.06□□□□□ -1.44
VEGFB-204ENST00000543462 DAND5Q8N907 189 aa6.06□□□□□ -1.44
VEGFB-204ENST00000543462 ZNF815PA8K554 130 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 M0R143 59 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 IGLV7-43P04211 117 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 KRTAP13-1Q8IUC0 172 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 PCP2Q8IVA1 136 aa6.05□□□□□ -1.44
VEGFB-204ENST00000543462 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
VEGFB-204ENST00000543462 IGLV1-50A0A075B6I6 118 aa6.04□□□□□ -1.44
VEGFB-204ENST00000543462 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
VEGFB-204ENST00000543462 COX8AP10176 69 aa6.04□□□□□ -1.44
VEGFB-204ENST00000543462 RPL24P83731 157 aaKnown RBP6.04□□□□□ -1.44
VEGFB-204ENST00000543462 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
VEGFB-204ENST00000543462 NKAPP1Q8N9T2 125 aa6.04□□□□□ -1.44
VEGFB-204ENST00000543462 TNXBP22105 4242 aa6.03□□□□□ -1.44
VEGFB-204ENST00000543462 UBE2BP63146 152 aa6.03□□□□□ -1.44
VEGFB-204ENST00000543462 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
VEGFB-204ENST00000543462 BOD1L2Q8IYS8 172 aa6.03□□□□□ -1.44
VEGFB-204ENST00000543462 PPDPFQ9H3Y8 114 aa6.03□□□□□ -1.44
VEGFB-204ENST00000543462 GAGE10A6NGK3 116 aa6.02□□□□□ -1.45
VEGFB-204ENST00000543462 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
VEGFB-204ENST00000543462 NDUFC2O95298 119 aa6.02□□□□□ -1.45
VEGFB-204ENST00000543462 SPANXDQ9BXN6 97 aa6.02□□□□□ -1.45
VEGFB-204ENST00000543462 SPANXCQ9NY87 97 aa6.02□□□□□ -1.45
VEGFB-204ENST00000543462 TRBV10-2A0A0K0K1G8 114 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 M0R378 163 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 BCE1O60756 84 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 SPRR1AP35321 89 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 LINC00308Q8TCZ7 52 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 SNHG12Q9BXW3 62 aa6.01□□□□□ -1.45
VEGFB-204ENST00000543462 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
VEGFB-204ENST00000543462 KRTAP4-16G5E9R7 235 aaPredicted RBP6□□□□□ -1.45
VEGFB-204ENST00000543462 NCR3O14931 201 aa6□□□□□ -1.45
VEGFB-204ENST00000543462 OXTP01178 125 aa6□□□□□ -1.45
VEGFB-204ENST00000543462 IGKV2D-28P01615 120 aa6□□□□□ -1.45
VEGFB-204ENST00000543462 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
VEGFB-204ENST00000543462 HIGD1BQ9P298 99 aa6□□□□□ -1.45
VEGFB-204ENST00000543462 TMEM238C9JI98 176 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 H0Y9J4 135 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 ZNF861PO60384 105 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 KRTAP1-4P0C5Y4 121 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 COL5A1-AS1Q5SY13 56 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 KCNQ1DNQ9H478 68 aa5.99□□□□□ -1.45
VEGFB-204ENST00000543462 TRBV10-3A0A0K0K1G6 114 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms