RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 CKS2P33552 79 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 KRTAP10-5P60370 271 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 ZNF345Q14585 488 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 MRPL51Q4U2R6 128 aaKnown RBP1.55□□□□□ -2.16
CHD4-209ENST00000542717 FAM104BQ5XKR9 115 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 SMCR5Q8TEV8 140 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 EIF5A2Q9GZV4 153 aaKnown RBP1.55□□□□□ -2.16
CHD4-209ENST00000542717 PRSS47A8MTI9 375 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 VPREB1P12018 145 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 RAB5AP20339 215 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 HERVK_113P63121 156 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 SEC11AP67812 179 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 LINC00483Q53H64 154 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 C2orf66Q6UXQ4 117 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 KRTAP8-1Q8IUC2 63 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 AMELXQ99217 191 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 VCX2Q9H322 139 aa1.54□□□□□ -2.16
CHD4-209ENST00000542717 HMSDA8MTL9 139 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 D6R8Y8 96 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 F8W036 122 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 TMEM250H0YL14 139 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 SMLR1H3BR10 107 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 NPYP01303 97 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 PPBPP02775 128 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 RAB5BP61020 215 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 RPL24P83731 157 aaKnown RBP1.53□□□□□ -2.16
CHD4-209ENST00000542717 C10orf91Q5T1B1 145 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 LCE1DQ5T752 114 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 ZC2HC1BQ5TFG8 222 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 CDKN2A-AS1Q9UH64 79 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 CYSLTR1Q9Y271 337 aa1.53□□□□□ -2.16
CHD4-209ENST00000542717 LOC107984156A0A0G2JMH3 177 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 A0A0G2JQZ4 141 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 A0A1B0GW15 77 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 IGIPA6NJ69 53 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 SMIM1B2RUZ4 78 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 H7C2G1 150 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 ATP5LO75964 103 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 RAB14P61106 215 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 FAM74A3Q4VXF1 159 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 PDZD11Q5EBL8 140 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 Q5VV11 94 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 Q75L30 129 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 PCP2Q8IVA1 136 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 ARL17AQ8IVW1 177 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 ORMDL3Q8N138 153 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 MTURNQ8N3F0 131 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 V9GYV3 84 aa1.52□□□□□ -2.17
CHD4-209ENST00000542717 IGLV5-45A0A087WSX0 123 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 LOC389332A0A1B0GUA5 103 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 ETDCA0A1B0GVM5 59 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 SMIM27A0A1W2PRY6 76 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 PRYO14603 147 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 S100A8P05109 93 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 PFN2P35080 140 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 SPRR1AP35321 89 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 MT4P47944 62 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 CEBPGP53567 150 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 COX17Q14061 63 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 PAPPA-AS1Q5QFB9 102 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 TMEM136Q6ZRR5 245 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 Q8NDZ9 215 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 OBSCN-AS1Q96MR7 158 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 PRELID3AQ96N28 172 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 SMIM7Q9BQ49 75 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 MAP1LC3AQ9H492 121 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 SND1-IT1Q9HBX3 110 aa1.51□□□□□ -2.17
CHD4-209ENST00000542717 TINCRA0A1B0GVN0 87 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 A0A1B0GXF2 115 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 K7EMI3 77 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 MT1BP07438 61 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 SPINK8P0C7L1 97 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 G0S2P27469 103 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 ORMDL2Q53FV1 153 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 C1orf195Q5TG92 126 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
CHD4-209ENST00000542717 Q8N8P6 123 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 ZCCHC13Q8WW36 166 aaKnown RBP1.5□□□□□ -2.17
CHD4-209ENST00000542717 MRPL18Q9H0U6 180 aaKnown RBP1.5□□□□□ -2.17
CHD4-209ENST00000542717 ERG28Q9UKR5 140 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 LAMTOR2Q9Y2Q5 125 aa1.5□□□□□ -2.17
CHD4-209ENST00000542717 TRAV9-1A0A075B6T8 112 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 H3BRM9 83 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 ERC2-IT1O76042 136 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 RPL23P62829 140 aaKnown RBP1.49□□□□□ -2.17
CHD4-209ENST00000542717 SFTA2Q6UW10 78 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 ERASQ7Z444 233 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 SMIM29Q86T20 159 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 SLC51BQ86UW2 128 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 KCNQ1DNQ9H478 68 aa1.49□□□□□ -2.17
CHD4-209ENST00000542717 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 IGLV5-39A0A0G2JS06 123 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 B5MCH6 92 aa1.48□□□□□ -2.17
CHD4-209ENST00000542717 NCR3O14931 201 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms