RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 LOC107984156A0A0G2JMH3 177 aa6.09□□□□□ -1.43
NPIPB4-216ENST00000542338 CTAG1AP78358 180 aa6.09□□□□□ -1.43
NPIPB4-216ENST00000542338 ARL17AQ8IVW1 177 aa6.09□□□□□ -1.43
NPIPB4-216ENST00000542338 LINC00308Q8TCZ7 52 aa6.09□□□□□ -1.43
NPIPB4-216ENST00000542338 PCP4L1A6NKN8 68 aa6.08□□□□□ -1.44
NPIPB4-216ENST00000542338 RPL18AQ02543 176 aaKnown RBP6.08□□□□□ -1.44
NPIPB4-216ENST00000542338 MUSTN1Q8IVN3 82 aa6.08□□□□□ -1.44
NPIPB4-216ENST00000542338 CEND1Q8N111 149 aa6.08□□□□□ -1.44
NPIPB4-216ENST00000542338 SND1-IT1Q9HBX3 110 aa6.08□□□□□ -1.44
NPIPB4-216ENST00000542338 C16orf90A8MZG2 172 aa6.07□□□□□ -1.44
NPIPB4-216ENST00000542338 GAGE2EQ4V326 116 aa6.07□□□□□ -1.44
NPIPB4-216ENST00000542338 Q6ZRP5 223 aa6.07□□□□□ -1.44
NPIPB4-216ENST00000542338 DAND5Q8N907 189 aa6.07□□□□□ -1.44
NPIPB4-216ENST00000542338 GAGE2DQ9UEU5 116 aa6.07□□□□□ -1.44
NPIPB4-216ENST00000542338 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
NPIPB4-216ENST00000542338 NDUFC2O95298 119 aa6.06□□□□□ -1.44
NPIPB4-216ENST00000542338 GAGE2BQ13066 116 aa6.06□□□□□ -1.44
NPIPB4-216ENST00000542338 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
NPIPB4-216ENST00000542338 DNAH17Q9UFH2 4485 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 A6NDN8 102 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 XP32Q5T750 250 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 SDIM1Q6ZPB5 146 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
NPIPB4-216ENST00000542338 A4D1N5 150 aa6.04□□□□□ -1.44
NPIPB4-216ENST00000542338 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
NPIPB4-216ENST00000542338 NPC2P61916 151 aa6.04□□□□□ -1.44
NPIPB4-216ENST00000542338 BVES-AS1Q5T3Y7 98 aa6.04□□□□□ -1.44
NPIPB4-216ENST00000542338 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
NPIPB4-216ENST00000542338 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
NPIPB4-216ENST00000542338 SOSTDC1Q6X4U4 206 aa6.03□□□□□ -1.44
NPIPB4-216ENST00000542338 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
NPIPB4-216ENST00000542338 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
NPIPB4-216ENST00000542338 TRAV13-2A0A0B4J235 113 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 A0A0B4J2C4 111 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 FXYD2P54710 66 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 RAB37Q96AX2 223 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 KIAA1109Q2LD37 5005 aa6.02□□□□□ -1.45
NPIPB4-216ENST00000542338 A0A096LNI7 61 aa6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 M0R378 163 aa6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 KRTAP10-2P60368 255 aa6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 DNAH11Q96DT5 4516 aa6.01□□□□□ -1.45
NPIPB4-216ENST00000542338 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 A0A1B0GWB2 263 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 CFC1BP0CG36 223 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 CFC1P0CG37 223 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 VPREB1P12018 145 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 BATFQ16520 125 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
NPIPB4-216ENST00000542338 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 TMEM126AQ9H061 195 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
NPIPB4-216ENST00000542338 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
NPIPB4-216ENST00000542338 EIF4EBP3O60516 100 aaPredicted RBP5.99□□□□□ -1.45
NPIPB4-216ENST00000542338 LINC01620Q4KN68 170 aa5.99□□□□□ -1.45
NPIPB4-216ENST00000542338 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
NPIPB4-216ENST00000542338 PKHD1P08F94 4074 aa5.99□□□□□ -1.45
NPIPB4-216ENST00000542338 CDK2AP2O75956 126 aa5.98□□□□□ -1.45
NPIPB4-216ENST00000542338 COL5A1-AS1Q5SY13 56 aa5.98□□□□□ -1.45
NPIPB4-216ENST00000542338 SPACA4Q8TDM5 124 aa5.98□□□□□ -1.45
NPIPB4-216ENST00000542338 SNHG12Q9BXW3 62 aa5.98□□□□□ -1.45
NPIPB4-216ENST00000542338 PKD1P98161 4303 aa5.98□□□□□ -1.45
NPIPB4-216ENST00000542338 IGKV2-28A0A075B6P5 120 aa5.97□□□□□ -1.45
NPIPB4-216ENST00000542338 IGKV2D-28P01615 120 aa5.97□□□□□ -1.45
NPIPB4-216ENST00000542338 MRPL55Q7Z7F7 128 aaKnown RBP5.97□□□□□ -1.45
NPIPB4-216ENST00000542338 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
NPIPB4-216ENST00000542338 DYNC1H1Q14204 4646 aaKnown RBP5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 EPM2AB3EWF7 344 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 NCR3O14931 201 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 CHTF8P0CG12 524 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 PRR3P79522 188 aaKnown RBP5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 SERTAD4-AS1Q5TG53 156 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 LINC00337Q8N6G1 96 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 PLAC8Q9NZF1 115 aa5.96□□□□□ -1.46
NPIPB4-216ENST00000542338 A0A087WYN8 130 aa5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 M0QXV9 152 aa5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 IGLV6-57P01721 117 aa5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 FUSP35637 526 aaKnown RBP eCLIP5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 RPL13AP40429 203 aaKnown RBP5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 Q1RN00 199 aa5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
NPIPB4-216ENST00000542338 FAM168BA1KXE4 195 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 COX6CP09669 75 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 VAMP3Q15836 100 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 Q6ZSA8 131 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 Q8NDZ9 215 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 C7orf33Q8WU49 177 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 LINC00167Q96N53 147 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
NPIPB4-216ENST00000542338 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
NPIPB4-216ENST00000542338 TRBV10-3A0A0K0K1G6 114 aa5.93□□□□□ -1.46
NPIPB4-216ENST00000542338 K7ERJ3 54 aa5.93□□□□□ -1.46
NPIPB4-216ENST00000542338 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms