RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 Q8NDZ9 215 aa5.94□□□□□ -1.46
YBX3-212ENST00000542002 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
YBX3-212ENST00000542002 IGLV7-43P04211 117 aa5.93□□□□□ -1.46
YBX3-212ENST00000542002 HSPB8Q9UJY1 196 aa5.93□□□□□ -1.46
YBX3-212ENST00000542002 ERG28Q9UKR5 140 aa5.93□□□□□ -1.46
YBX3-212ENST00000542002 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 UBE2BP63146 152 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 LINC00167Q96N53 147 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 SND1-IT1Q9HBX3 110 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
YBX3-212ENST00000542002 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
YBX3-212ENST00000542002 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
YBX3-212ENST00000542002 MRPL55Q7Z7F7 128 aaKnown RBP5.91□□□□□ -1.46
YBX3-212ENST00000542002 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
YBX3-212ENST00000542002 A0A0U1RRA0 63 aa5.9□□□□□ -1.46
YBX3-212ENST00000542002 GAGE10A6NGK3 116 aa5.9□□□□□ -1.46
YBX3-212ENST00000542002 COX17Q14061 63 aa5.9□□□□□ -1.46
YBX3-212ENST00000542002 TP73-AS1Q9UF72 201 aa5.9□□□□□ -1.46
YBX3-212ENST00000542002 DPM2O94777 84 aa5.89□□□□□ -1.47
YBX3-212ENST00000542002 SMIM13P0DJ93 91 aa5.89□□□□□ -1.47
YBX3-212ENST00000542002 VPREB1P12018 145 aa5.89□□□□□ -1.47
YBX3-212ENST00000542002 LBHQ53QV2 105 aaPredicted RBP5.89□□□□□ -1.47
YBX3-212ENST00000542002 COA6Q5JTJ3 125 aaKnown RBP5.89□□□□□ -1.47
YBX3-212ENST00000542002 MAP1LC3CQ9BXW4 147 aa5.89□□□□□ -1.47
YBX3-212ENST00000542002 SYS1-DBNDD2H3BUS1 97 aa5.88□□□□□ -1.47
YBX3-212ENST00000542002 IGKCP01834 107 aa5.88□□□□□ -1.47
YBX3-212ENST00000542002 PLNP26678 52 aa5.88□□□□□ -1.47
YBX3-212ENST00000542002 LINC00158P58513 81 aa5.88□□□□□ -1.47
YBX3-212ENST00000542002 LEPROTO15243 131 aa5.87□□□□□ -1.47
YBX3-212ENST00000542002 ATP6V1G1O75348 118 aa5.87□□□□□ -1.47
YBX3-212ENST00000542002 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
YBX3-212ENST00000542002 REG3GQ6UW15 175 aa5.87□□□□□ -1.47
YBX3-212ENST00000542002 NDUFA12Q9UI09 145 aa5.87□□□□□ -1.47
YBX3-212ENST00000542002 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 H0Y9J4 135 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 J3QQQ9 107 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 ZNF861PO60384 105 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 C3orf79P0CE67 100 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 S100A1P23297 94 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 LINC01545Q5VT33 79 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 MIR7-3HGQ8N6C7 128 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 DIRC1Q969H9 104 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
YBX3-212ENST00000542002 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 BCE1O60756 84 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 HERV-K104P63124 156 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 NKAPP1Q8N9T2 125 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
YBX3-212ENST00000542002 TMEM238C9JI98 176 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 MEIG1Q5JSS6 88 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 PET117Q6UWS5 81 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 KRTAP13-1Q8IUC0 172 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 DAND5Q8N907 189 aa5.84□□□□□ -1.47
YBX3-212ENST00000542002 E9PLD3 99 aa5.83□□□□□ -1.48
YBX3-212ENST00000542002 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
YBX3-212ENST00000542002 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
YBX3-212ENST00000542002 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
YBX3-212ENST00000542002 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
YBX3-212ENST00000542002 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
YBX3-212ENST00000542002 M0R378 163 aa5.82□□□□□ -1.48
YBX3-212ENST00000542002 KRTDAPP60985 99 aa5.82□□□□□ -1.48
YBX3-212ENST00000542002 HERVK_113P61574 105 aa5.82□□□□□ -1.48
YBX3-212ENST00000542002 BOD1L2Q8IYS8 172 aa5.82□□□□□ -1.48
YBX3-212ENST00000542002 LOC107984156A0A0G2JMH3 177 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 A0A0J9YXY3 114 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 LGALS3P17931 250 aaKnown RBP5.81□□□□□ -1.48
YBX3-212ENST00000542002 NMUP48645 174 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 ARL17AQ8IVW1 177 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 TTTY13Q9BZ97 58 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 TMEM126AQ9H061 195 aa5.81□□□□□ -1.48
YBX3-212ENST00000542002 LINC00587B1AMM8 73 aa5.8□□□□□ -1.48
YBX3-212ENST00000542002 NCR3O14931 201 aa5.8□□□□□ -1.48
YBX3-212ENST00000542002 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
YBX3-212ENST00000542002 SOSTDC1Q6X4U4 206 aa5.8□□□□□ -1.48
YBX3-212ENST00000542002 ANAPC11Q9NYG5 84 aa5.8□□□□□ -1.48
YBX3-212ENST00000542002 PRLHP81277 87 aa5.79□□□□□ -1.48
YBX3-212ENST00000542002 ATOH7Q8N100 152 aa5.79□□□□□ -1.48
YBX3-212ENST00000542002 HIST3H2BBQ8N257 126 aa5.79□□□□□ -1.48
YBX3-212ENST00000542002 LITAFQ99732 161 aa5.79□□□□□ -1.48
YBX3-212ENST00000542002 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
YBX3-212ENST00000542002 UBE2AP49459 152 aa5.78□□□□□ -1.48
YBX3-212ENST00000542002 FAM19A1Q7Z5A9 133 aa5.78□□□□□ -1.48
YBX3-212ENST00000542002 HIST1H2BLQ99880 126 aa5.78□□□□□ -1.48
YBX3-212ENST00000542002 A0A087X002 238 aa5.77□□□□□ -1.49
YBX3-212ENST00000542002 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
YBX3-212ENST00000542002 NPC2P61916 151 aa5.77□□□□□ -1.49
YBX3-212ENST00000542002 ANKRD39Q53RE8 183 aa5.77□□□□□ -1.49
YBX3-212ENST00000542002 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
YBX3-212ENST00000542002 KRTAP4-16G5E9R7 235 aaPredicted RBP5.76□□□□□ -1.49
YBX3-212ENST00000542002 SPRR1AP35321 89 aa5.76□□□□□ -1.49
YBX3-212ENST00000542002 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
YBX3-212ENST00000542002 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
YBX3-212ENST00000542002 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
YBX3-212ENST00000542002 NDUFC2O95298 119 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms