RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 LYRM9A8MSI8 78 aa9.2□□□□□ -0.94
PTPN1-202ENST00000541713 C9orf153Q5TBE3 101 aa9.2□□□□□ -0.94
PTPN1-202ENST00000541713 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
PTPN1-202ENST00000541713 Q8NAQ8 132 aa9.2□□□□□ -0.94
PTPN1-202ENST00000541713 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
PTPN1-202ENST00000541713 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
PTPN1-202ENST00000541713 SCXQ7RTU7 201 aa9.19□□□□□ -0.94
PTPN1-202ENST00000541713 STAB2Q8WWQ8 2551 aa9.19□□□□□ -0.94
PTPN1-202ENST00000541713 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
PTPN1-202ENST00000541713 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
PTPN1-202ENST00000541713 TMEM126AQ9H061 195 aa9.18□□□□□ -0.94
PTPN1-202ENST00000541713 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
PTPN1-202ENST00000541713 Q8N814 137 aa9.18□□□□□ -0.94
PTPN1-202ENST00000541713 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 M0R2N4 97 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 HAMPP81172 84 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
PTPN1-202ENST00000541713 Q6ZQY7 126 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 A0A1B0GX51 115 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
PTPN1-202ENST00000541713 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
PTPN1-202ENST00000541713 ACYP1P07311 99 aa9.15□□□□□ -0.94
PTPN1-202ENST00000541713 LYPD5Q6UWN5 251 aa9.15□□□□□ -0.94
PTPN1-202ENST00000541713 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.94
PTPN1-202ENST00000541713 hADV29S1A0JD25 119 aa9.14□□□□□ -0.95
PTPN1-202ENST00000541713 A0A0J9YWU9 116 aa9.13□□□□□ -0.95
PTPN1-202ENST00000541713 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
PTPN1-202ENST00000541713 MIFP14174 115 aa9.13□□□□□ -0.95
PTPN1-202ENST00000541713 LELP1Q5T871 98 aa9.13□□□□□ -0.95
PTPN1-202ENST00000541713 Q6Q795 121 aa9.12□□□□□ -0.95
PTPN1-202ENST00000541713 TRBV7-7A0A0K0K1E9 115 aa9.12□□□□□ -0.95
PTPN1-202ENST00000541713 KRTAP10-11P60412 298 aa9.12□□□□□ -0.95
PTPN1-202ENST00000541713 Q6ZRU5 148 aa9.1□□□□□ -0.95
PTPN1-202ENST00000541713 ESRGQ1W209 222 aa9.1□□□□□ -0.95
PTPN1-202ENST00000541713 CYSTM1Q9H1C7 97 aa9.1□□□□□ -0.95
PTPN1-202ENST00000541713 LINC01600Q96MT4 127 aa9.09□□□□□ -0.95
PTPN1-202ENST00000541713 ANK2Q01484 3957 aa9.09□□□□□ -0.95
PTPN1-202ENST00000541713 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
PTPN1-202ENST00000541713 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
PTPN1-202ENST00000541713 TMEM256-PLSCR3K7ERE1 68 aa9.08□□□□□ -0.96
PTPN1-202ENST00000541713 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
PTPN1-202ENST00000541713 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
PTPN1-202ENST00000541713 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
PTPN1-202ENST00000541713 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
PTPN1-202ENST00000541713 LINC00575Q6W349 94 aa9.07□□□□□ -0.96
PTPN1-202ENST00000541713 SRRM2Q9UQ35 2752 aaKnown RBP9.07□□□□□ -0.96
PTPN1-202ENST00000541713 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
PTPN1-202ENST00000541713 CCKP06307 115 aa9.06□□□□□ -0.96
PTPN1-202ENST00000541713 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
PTPN1-202ENST00000541713 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
PTPN1-202ENST00000541713 Q8N9L7 120 aa9.05□□□□□ -0.96
PTPN1-202ENST00000541713 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
PTPN1-202ENST00000541713 DIRC1Q969H9 104 aa9.04□□□□□ -0.96
PTPN1-202ENST00000541713 DSCR8Q96T75 97 aa9.04□□□□□ -0.96
PTPN1-202ENST00000541713 ZNF73O43830 326 aaPredicted RBP9.03□□□□□ -0.96
PTPN1-202ENST00000541713 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
PTPN1-202ENST00000541713 COX17Q14061 63 aa9.03□□□□□ -0.96
PTPN1-202ENST00000541713 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
PTPN1-202ENST00000541713 GHRHP01286 108 aa9.02□□□□□ -0.97
PTPN1-202ENST00000541713 KRTAP24-1Q3LI83 254 aa9.02□□□□□ -0.97
PTPN1-202ENST00000541713 UPK3BQ9BT76 320 aa9.02□□□□□ -0.97
PTPN1-202ENST00000541713 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
PTPN1-202ENST00000541713 C3orf84H3BNL1 204 aa9.01□□□□□ -0.97
PTPN1-202ENST00000541713 FAM168BA1KXE4 195 aa9.01□□□□□ -0.97
PTPN1-202ENST00000541713 NDUFC2O95298 119 aa9.01□□□□□ -0.97
PTPN1-202ENST00000541713 COX7BP24311 80 aa9.01□□□□□ -0.97
PTPN1-202ENST00000541713 Q6ZRP5 223 aa9□□□□□ -0.97
PTPN1-202ENST00000541713 IMUPQ9GZP8 106 aa9□□□□□ -0.97
PTPN1-202ENST00000541713 C20orf197Q8N268 126 aa9□□□□□ -0.97
PTPN1-202ENST00000541713 UQCRQO14949 82 aa8.99□□□□□ -0.97
PTPN1-202ENST00000541713 COX7CP15954 63 aa8.99□□□□□ -0.97
PTPN1-202ENST00000541713 PRR34Q9NV39 138 aa8.99□□□□□ -0.97
PTPN1-202ENST00000541713 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
PTPN1-202ENST00000541713 NKAPP1Q8N9T2 125 aa8.98□□□□□ -0.97
PTPN1-202ENST00000541713 ATOX1O00244 68 aa8.98□□□□□ -0.97
PTPN1-202ENST00000541713 Q6JHZ5 121 aa8.98□□□□□ -0.97
PTPN1-202ENST00000541713 COL7A1Q02388 2944 aa8.98□□□□□ -0.97
PTPN1-202ENST00000541713 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
PTPN1-202ENST00000541713 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
PTPN1-202ENST00000541713 C15orf56Q8N910 161 aa8.97□□□□□ -0.97
PTPN1-202ENST00000541713 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
PTPN1-202ENST00000541713 IGKV2-24A0A0C4DH68 120 aa8.96□□□□□ -0.97
PTPN1-202ENST00000541713 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.97
PTPN1-202ENST00000541713 IGLV6-57P01721 117 aa8.96□□□□□ -0.98
PTPN1-202ENST00000541713 SERTAD4-AS1Q5TG53 156 aa8.96□□□□□ -0.98
PTPN1-202ENST00000541713 OBSCN-AS1Q96MR7 158 aa8.96□□□□□ -0.98
PTPN1-202ENST00000541713 SYCNQ0VAF6 134 aa8.96□□□□□ -0.98
PTPN1-202ENST00000541713 Q6ZQT0 140 aa8.95□□□□□ -0.98
PTPN1-202ENST00000541713 TRAV10A0A0B4J240 114 aa8.94□□□□□ -0.98
PTPN1-202ENST00000541713 Q6ZVQ6 151 aa8.94□□□□□ -0.98
PTPN1-202ENST00000541713 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
PTPN1-202ENST00000541713 VPREB1P12018 145 aa8.94□□□□□ -0.98
PTPN1-202ENST00000541713 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
PTPN1-202ENST00000541713 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
PTPN1-202ENST00000541713 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms