RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 APOBP04114 4563 aaKnown RBP5.98□□□□□ -1.45
DDX55-208ENST00000541259 A0A096LNI7 61 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 PANO1I0J062 215 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 DLEU1O43261 78 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 TLX1NBP0CAT3 122 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 CHTF8P0CG12 524 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 GAGE2EQ4V326 116 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 SLC25A34Q6PIV7 304 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 GAGE2DQ9UEU5 116 aa5.97□□□□□ -1.45
DDX55-208ENST00000541259 IGKV2-24A0A0C4DH68 120 aa5.96□□□□□ -1.46
DDX55-208ENST00000541259 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
DDX55-208ENST00000541259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
DDX55-208ENST00000541259 COX17Q14061 63 aa5.96□□□□□ -1.46
DDX55-208ENST00000541259 MIR7-3HGQ8N6C7 128 aa5.96□□□□□ -1.46
DDX55-208ENST00000541259 XAGE1AQ9HD64 81 aa5.96□□□□□ -1.46
DDX55-208ENST00000541259 C16orf90A8MZG2 172 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 NPC2P61916 151 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
DDX55-208ENST00000541259 C2orf91Q6ZV80 131 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 SND1-IT1Q9HBX3 110 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 FAM30AQ9NZY2 134 aa5.95□□□□□ -1.46
DDX55-208ENST00000541259 FAM168BA1KXE4 195 aa5.94□□□□□ -1.46
DDX55-208ENST00000541259 LINC00587B1AMM8 73 aa5.94□□□□□ -1.46
DDX55-208ENST00000541259 TIMM17BO60830 172 aa5.94□□□□□ -1.46
DDX55-208ENST00000541259 CIRBPQ14011 172 aaKnown RBP5.94□□□□□ -1.46
DDX55-208ENST00000541259 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
DDX55-208ENST00000541259 SOSTDC1Q6X4U4 206 aa5.94□□□□□ -1.46
DDX55-208ENST00000541259 TMEM238C9JI98 176 aa5.93□□□□□ -1.46
DDX55-208ENST00000541259 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
DDX55-208ENST00000541259 Q8NDZ9 215 aa5.93□□□□□ -1.46
DDX55-208ENST00000541259 UQCR10Q9UDW1 63 aa5.93□□□□□ -1.46
DDX55-208ENST00000541259 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 HAMPP81172 84 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 MUSTN1Q8IVN3 82 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 SPACA4Q8TDM5 124 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 SPANXDQ9BXN6 97 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 SPANXCQ9NY87 97 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 HIGD1BQ9P298 99 aa5.92□□□□□ -1.46
DDX55-208ENST00000541259 SRSF9Q13242 221 aaKnown RBP eCLIP5.91□□□□□ -1.46
DDX55-208ENST00000541259 SERTAD4-AS1Q5TG53 156 aa5.91□□□□□ -1.46
DDX55-208ENST00000541259 Q6ZSA8 131 aa5.91□□□□□ -1.46
DDX55-208ENST00000541259 SPANXB1Q9NS25 103 aaPredicted RBP5.91□□□□□ -1.46
DDX55-208ENST00000541259 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
DDX55-208ENST00000541259 LOC107984156A0A0G2JMH3 177 aa5.9□□□□□ -1.46
DDX55-208ENST00000541259 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
DDX55-208ENST00000541259 FAM19A5Q7Z5A7 132 aaPredicted RBP5.9□□□□□ -1.46
DDX55-208ENST00000541259 ARL17AQ8IVW1 177 aa5.9□□□□□ -1.46
DDX55-208ENST00000541259 HIST1H4GQ99525 98 aa5.9□□□□□ -1.46
DDX55-208ENST00000541259 A0A087WYN8 130 aa5.89□□□□□ -1.47
DDX55-208ENST00000541259 TSTD3H0UI37 97 aa5.89□□□□□ -1.47
DDX55-208ENST00000541259 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
DDX55-208ENST00000541259 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
DDX55-208ENST00000541259 RYR1P21817 5038 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 HSPG2P98160 4391 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 VPREB1P12018 145 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 IFITM1P13164 125 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 Q6ZVH6 145 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 CIRBP-AS1Q8TBR5 109 aa5.88□□□□□ -1.47
DDX55-208ENST00000541259 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 NCR3O14931 201 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 XGP55808 180 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 CTAG1AP78358 180 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 PHF5AQ7RTV0 110 aaKnown RBP5.87□□□□□ -1.47
DDX55-208ENST00000541259 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 C22orf24Q9Y442 160 aa5.87□□□□□ -1.47
DDX55-208ENST00000541259 FAT1Q14517 4588 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 A4D1N5 150 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 TAL2Q16559 108 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 CEND1Q8N111 149 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 KIAA1109Q2LD37 5005 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
DDX55-208ENST00000541259 IGLV5-37A0A075B6J1 123 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 IGKV2-28A0A075B6P5 120 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 GAGE10A6NGK3 116 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 M0QXV9 152 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 NDUFC2O95298 119 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 IGKV2D-28P01615 120 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 DDTP30046 118 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 FXYD2P54710 66 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 RPL24P83731 157 aaKnown RBP5.85□□□□□ -1.47
DDX55-208ENST00000541259 HSD52Q0P140 79 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
DDX55-208ENST00000541259 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
DDX55-208ENST00000541259 NKAPP1Q8N9T2 125 aa5.84□□□□□ -1.47
DDX55-208ENST00000541259 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
DDX55-208ENST00000541259 LINC00167Q96N53 147 aa5.84□□□□□ -1.47
DDX55-208ENST00000541259 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
DDX55-208ENST00000541259 RPL37AP8A6NKH3 93 aa5.83□□□□□ -1.48
DDX55-208ENST00000541259 M0R378 163 aa5.83□□□□□ -1.48
DDX55-208ENST00000541259 HINT1P49773 126 aaPredicted RBP5.83□□□□□ -1.48
DDX55-208ENST00000541259 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
DDX55-208ENST00000541259 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms