RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 UBE2BP63146 152 aa13.25□□□□□ -0.29
FERMT3-204ENST00000540957 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
FERMT3-204ENST00000540957 PLA2G2DQ9UNK4 145 aa13.24□□□□□ -0.29
FERMT3-204ENST00000540957 C22orf24Q9Y442 160 aa13.24□□□□□ -0.29
FERMT3-204ENST00000540957 C5orf52A6NGY3 159 aa13.23□□□□□ -0.29
FERMT3-204ENST00000540957 ATOH7Q8N100 152 aa13.22□□□□□ -0.29
FERMT3-204ENST00000540957 NKAPP1Q8N9T2 125 aa13.22□□□□□ -0.29
FERMT3-204ENST00000540957 TP73-AS1Q9UF72 201 aa13.22□□□□□ -0.29
FERMT3-204ENST00000540957 MRPL55Q7Z7F7 128 aaKnown RBP13.21□□□□□ -0.29
FERMT3-204ENST00000540957 PSORS1C2Q9UIG4 136 aa13.21□□□□□ -0.29
FERMT3-204ENST00000540957 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
FERMT3-204ENST00000540957 MIR7-3HGQ8N6C7 128 aa13.2□□□□□ -0.3
FERMT3-204ENST00000540957 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
FERMT3-204ENST00000540957 IGKV2D-26A0A0A0MRZ7 120 aa13.18□□□□□ -0.3
FERMT3-204ENST00000540957 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
FERMT3-204ENST00000540957 C1orf137Q5JT78 98 aa13.18□□□□□ -0.3
FERMT3-204ENST00000540957 A0A0J9YXY3 114 aa13.16□□□□□ -0.3
FERMT3-204ENST00000540957 GAGE10A6NGK3 116 aa13.16□□□□□ -0.3
FERMT3-204ENST00000540957 ZNF815PA8K554 130 aa13.16□□□□□ -0.3
FERMT3-204ENST00000540957 VPREB1P12018 145 aa13.16□□□□□ -0.3
FERMT3-204ENST00000540957 KRTAP11-1Q8IUC1 163 aa13.16□□□□□ -0.3
FERMT3-204ENST00000540957 ANKRD39Q53RE8 183 aa13.14□□□□□ -0.31
FERMT3-204ENST00000540957 DAND5Q8N907 189 aa13.14□□□□□ -0.31
FERMT3-204ENST00000540957 LINC00167Q96N53 147 aa13.14□□□□□ -0.31
FERMT3-204ENST00000540957 BOD1L2Q8IYS8 172 aa13.13□□□□□ -0.31
FERMT3-204ENST00000540957 RPL37AP8A6NKH3 93 aa13.12□□□□□ -0.31
FERMT3-204ENST00000540957 HSBP1L1C9JCN9 74 aa13.12□□□□□ -0.31
FERMT3-204ENST00000540957 SCGB1D1O95968 90 aa13.12□□□□□ -0.31
FERMT3-204ENST00000540957 MIEN1Q9BRT3 115 aa13.12□□□□□ -0.31
FERMT3-204ENST00000540957 TTTY13Q9BZ97 58 aa13.12□□□□□ -0.31
FERMT3-204ENST00000540957 Q8NDZ9 215 aa13.11□□□□□ -0.31
FERMT3-204ENST00000540957 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
FERMT3-204ENST00000540957 IGLV7-43P04211 117 aa13.09□□□□□ -0.31
FERMT3-204ENST00000540957 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
FERMT3-204ENST00000540957 IGKV2-28A0A075B6P5 120 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 TIMM17BO60830 172 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 IGKV2D-28P01615 120 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 ADAMTSL4-AS1Q5T5F5 129 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 SCGB1D4Q6XE38 83 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 MYCBP2O75592 4640 aa13.07□□□□□ -0.32
FERMT3-204ENST00000540957 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
FERMT3-204ENST00000540957 NCR3O14931 201 aa13.06□□□□□ -0.32
FERMT3-204ENST00000540957 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
FERMT3-204ENST00000540957 M0R378 163 aa13.05□□□□□ -0.32
FERMT3-204ENST00000540957 NPC2P61916 151 aa13.05□□□□□ -0.32
FERMT3-204ENST00000540957 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
FERMT3-204ENST00000540957 PCP2Q8IVA1 136 aa13.05□□□□□ -0.32
FERMT3-204ENST00000540957 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
FERMT3-204ENST00000540957 IGLV1-50A0A075B6I6 118 aa13.04□□□□□ -0.32
FERMT3-204ENST00000540957 LITAFQ99732 161 aa13.04□□□□□ -0.32
FERMT3-204ENST00000540957 BCE1O60756 84 aa13.03□□□□□ -0.32
FERMT3-204ENST00000540957 TMEM238C9JI98 176 aa13.02□□□□□ -0.33
FERMT3-204ENST00000540957 KRTAP29-1A8MX34 341 aaPredicted RBP13□□□□□ -0.33
FERMT3-204ENST00000540957 OXTP01178 125 aa13□□□□□ -0.33
FERMT3-204ENST00000540957 REG3GQ6UW15 175 aa13□□□□□ -0.33
FERMT3-204ENST00000540957 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
FERMT3-204ENST00000540957 DIRC1Q969H9 104 aa13□□□□□ -0.33
FERMT3-204ENST00000540957 SPANXB1Q9NS25 103 aaPredicted RBP13□□□□□ -0.33
FERMT3-204ENST00000540957 J3QL48 77 aa12.99□□□□□ -0.33
FERMT3-204ENST00000540957 NDUFC2O95298 119 aa12.99□□□□□ -0.33
FERMT3-204ENST00000540957 LINC00308Q8TCZ7 52 aa12.99□□□□□ -0.33
FERMT3-204ENST00000540957 RPL28P46779 137 aaKnown RBP12.98□□□□□ -0.33
FERMT3-204ENST00000540957 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
FERMT3-204ENST00000540957 TRBV10-2A0A0K0K1G8 114 aa12.97□□□□□ -0.33
FERMT3-204ENST00000540957 ZNF861PO60384 105 aa12.97□□□□□ -0.33
FERMT3-204ENST00000540957 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
FERMT3-204ENST00000540957 UBE2AP49459 152 aa12.96□□□□□ -0.33
FERMT3-204ENST00000540957 S100A12P80511 92 aa12.96□□□□□ -0.33
FERMT3-204ENST00000540957 JOSD1Q15040 202 aaPredicted RBP12.96□□□□□ -0.33
FERMT3-204ENST00000540957 SPANXDQ9BXN6 97 aa12.96□□□□□ -0.33
FERMT3-204ENST00000540957 SPANXCQ9NY87 97 aa12.96□□□□□ -0.33
FERMT3-204ENST00000540957 H0Y9J4 135 aa12.95□□□□□ -0.34
FERMT3-204ENST00000540957 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
FERMT3-204ENST00000540957 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
FERMT3-204ENST00000540957 S100A7L2Q5SY68 101 aa12.94□□□□□ -0.34
FERMT3-204ENST00000540957 FAT3Q8TDW7 4589 aa12.94□□□□□ -0.34
FERMT3-204ENST00000540957 LRP1Q07954 4544 aaKnown RBP12.94□□□□□ -0.34
FERMT3-204ENST00000540957 PRYO14603 147 aa12.93□□□□□ -0.34
FERMT3-204ENST00000540957 DDTP30046 118 aa12.93□□□□□ -0.34
FERMT3-204ENST00000540957 Q6ZVH6 145 aa12.93□□□□□ -0.34
FERMT3-204ENST00000540957 FAM19A1Q7Z5A9 133 aa12.93□□□□□ -0.34
FERMT3-204ENST00000540957 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
FERMT3-204ENST00000540957 IFITM1P13164 125 aa12.91□□□□□ -0.34
FERMT3-204ENST00000540957 KCNQ1DNQ9H478 68 aa12.91□□□□□ -0.34
FERMT3-204ENST00000540957 PAM16Q9Y3D7 125 aa12.91□□□□□ -0.34
FERMT3-204ENST00000540957 PRLHP81277 87 aa12.9□□□□□ -0.34
FERMT3-204ENST00000540957 COX8AP10176 69 aa12.89□□□□□ -0.35
FERMT3-204ENST00000540957 SPATA45Q537H7 98 aa12.89□□□□□ -0.35
FERMT3-204ENST00000540957 KRTAP13-1Q8IUC0 172 aa12.88□□□□□ -0.35
FERMT3-204ENST00000540957 LINC01600Q96MT4 127 aa12.88□□□□□ -0.35
FERMT3-204ENST00000540957 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
FERMT3-204ENST00000540957 PPDPFQ9H3Y8 114 aa12.87□□□□□ -0.35
FERMT3-204ENST00000540957 DMBT1Q9UGM3 2413 aaPredicted RBP12.87□□□□□ -0.35
FERMT3-204ENST00000540957 ETDCA0A1B0GVM5 59 aa12.86□□□□□ -0.35
FERMT3-204ENST00000540957 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
FERMT3-204ENST00000540957 LINC00518Q8N0U6 118 aa12.86□□□□□ -0.35
FERMT3-204ENST00000540957 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
FERMT3-204ENST00000540957 TRAV23DV6A0A075B6W5 121 aa12.85□□□□□ -0.35
FERMT3-204ENST00000540957 SPRR1AP35321 89 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms