RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
CLSTN3-210ENST00000540931 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
CLSTN3-210ENST00000540931 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
CLSTN3-210ENST00000540931 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
CLSTN3-210ENST00000540931 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
CLSTN3-210ENST00000540931 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
CLSTN3-210ENST00000540931 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
CLSTN3-210ENST00000540931 VAMP8Q9BV40 100 aa11.03□□□□□ -0.64
CLSTN3-210ENST00000540931 A0A1W2PNN7 141 aa11.02□□□□□ -0.65
CLSTN3-210ENST00000540931 M0QXV9 152 aa11.02□□□□□ -0.65
CLSTN3-210ENST00000540931 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-210ENST00000540931 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
CLSTN3-210ENST00000540931 A0A0U1RRA0 63 aa11□□□□□ -0.65
CLSTN3-210ENST00000540931 PPDPFQ9H3Y8 114 aa11□□□□□ -0.65
CLSTN3-210ENST00000540931 MRPL55Q7Z7F7 128 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-210ENST00000540931 C22orf24Q9Y442 160 aa10.99□□□□□ -0.65
CLSTN3-210ENST00000540931 DLEU1O43261 78 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 NDUFC2O95298 119 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 SMR3BP02814 79 aaPredicted RBP10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 IFITM1P13164 125 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 S100A12P80511 92 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 HAMPP81172 84 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 DNAH8Q96JB1 4490 aa10.98□□□□□ -0.65
CLSTN3-210ENST00000540931 FAM168BA1KXE4 195 aa10.97□□□□□ -0.65
CLSTN3-210ENST00000540931 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-210ENST00000540931 UBE2BP63146 152 aa10.97□□□□□ -0.65
CLSTN3-210ENST00000540931 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
CLSTN3-210ENST00000540931 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
CLSTN3-210ENST00000540931 COX8AP10176 69 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 SPATA45Q537H7 98 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 Q5VSD8 79 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 PCP2Q8IVA1 136 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 SPANXDQ9BXN6 97 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 SPANXCQ9NY87 97 aa10.96□□□□□ -0.65
CLSTN3-210ENST00000540931 M0R378 163 aa10.95□□□□□ -0.66
CLSTN3-210ENST00000540931 VPREB1P12018 145 aa10.95□□□□□ -0.66
CLSTN3-210ENST00000540931 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
CLSTN3-210ENST00000540931 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
CLSTN3-210ENST00000540931 TRBV10-2A0A0K0K1G8 114 aa10.94□□□□□ -0.66
CLSTN3-210ENST00000540931 PHF5AQ7RTV0 110 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-210ENST00000540931 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
CLSTN3-210ENST00000540931 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
CLSTN3-210ENST00000540931 LINC00518Q8N0U6 118 aa10.93□□□□□ -0.66
CLSTN3-210ENST00000540931 LITAFQ99732 161 aa10.93□□□□□ -0.66
CLSTN3-210ENST00000540931 SPANXB1Q9NS25 103 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-210ENST00000540931 SRSF9Q13242 221 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 LINC00308Q8TCZ7 52 aa10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 FAT1Q14517 4588 aa10.92□□□□□ -0.66
CLSTN3-210ENST00000540931 DAND5Q8N907 189 aa10.91□□□□□ -0.66
CLSTN3-210ENST00000540931 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
CLSTN3-210ENST00000540931 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
CLSTN3-210ENST00000540931 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
CLSTN3-210ENST00000540931 SMIM6P0DI80 62 aa10.88□□□□□ -0.67
CLSTN3-210ENST00000540931 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
CLSTN3-210ENST00000540931 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
CLSTN3-210ENST00000540931 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
CLSTN3-210ENST00000540931 FLG2Q5D862 2391 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-210ENST00000540931 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
CLSTN3-210ENST00000540931 C14orf144Q96I85 54 aa10.86□□□□□ -0.67
CLSTN3-210ENST00000540931 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
CLSTN3-210ENST00000540931 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
CLSTN3-210ENST00000540931 NPC2P61916 151 aa10.84□□□□□ -0.67
CLSTN3-210ENST00000540931 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
CLSTN3-210ENST00000540931 TMEM126AQ9H061 195 aa10.84□□□□□ -0.67
CLSTN3-210ENST00000540931 GAGE10A6NGK3 116 aa10.83□□□□□ -0.68
CLSTN3-210ENST00000540931 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
CLSTN3-210ENST00000540931 PRYO14603 147 aa10.83□□□□□ -0.68
CLSTN3-210ENST00000540931 TAL2Q16559 108 aa10.83□□□□□ -0.68
CLSTN3-210ENST00000540931 SOSTDC1Q6X4U4 206 aa10.83□□□□□ -0.68
CLSTN3-210ENST00000540931 NCR3O14931 201 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 BCE1O60756 84 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 DDTP30046 118 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 SPINK6Q6UWN8 80 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
CLSTN3-210ENST00000540931 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 IGKV2D-28P01615 120 aa10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 UQCR10Q9UDW1 63 aa10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 SRRM2Q9UQ35 2752 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-210ENST00000540931 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
CLSTN3-210ENST00000540931 KRTAP10-4P60372 401 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-210ENST00000540931 Q8NDZ9 215 aa10.8□□□□□ -0.68
CLSTN3-210ENST00000540931 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
CLSTN3-210ENST00000540931 HINT1P49773 126 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-210ENST00000540931 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
CLSTN3-210ENST00000540931 TRBV10-3A0A0K0K1G6 114 aa10.78□□□□□ -0.68
CLSTN3-210ENST00000540931 OR13C6PQ8NH95 151 aa10.78□□□□□ -0.68
CLSTN3-210ENST00000540931 DIRC1Q969H9 104 aa10.78□□□□□ -0.68
CLSTN3-210ENST00000540931 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.69
CLSTN3-210ENST00000540931 A6NJY4 79 aa10.77□□□□□ -0.69
CLSTN3-210ENST00000540931 H0Y9J4 135 aa10.77□□□□□ -0.69
CLSTN3-210ENST00000540931 ZNF861PO60384 105 aa10.77□□□□□ -0.69
CLSTN3-210ENST00000540931 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-210ENST00000540931 LINC00337Q8N6G1 96 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms