RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PYY3Q5JQD4 70 aa10.49□□□□□ -0.73
UBC-208ENST00000540700 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
UBC-208ENST00000540700 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
UBC-208ENST00000540700 NMUP48645 174 aa10.48□□□□□ -0.73
UBC-208ENST00000540700 HERV-K104P63124 156 aa10.48□□□□□ -0.73
UBC-208ENST00000540700 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
UBC-208ENST00000540700 LINC00474Q9P2X8 69 aa10.48□□□□□ -0.73
UBC-208ENST00000540700 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
UBC-208ENST00000540700 AKR1D1P51857 326 aa10.47□□□□□ -0.73
UBC-208ENST00000540700 Q8NDZ9 215 aa10.47□□□□□ -0.73
UBC-208ENST00000540700 COX17Q14061 63 aa10.46□□□□□ -0.73
UBC-208ENST00000540700 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.73
UBC-208ENST00000540700 DPH3Q96FX2 82 aa10.46□□□□□ -0.73
UBC-208ENST00000540700 SND1-IT1Q9HBX3 110 aa10.46□□□□□ -0.73
UBC-208ENST00000540700 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.73
UBC-208ENST00000540700 ZNF815PA8K554 130 aa10.45□□□□□ -0.74
UBC-208ENST00000540700 LINC00158P58513 81 aa10.45□□□□□ -0.74
UBC-208ENST00000540700 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
UBC-208ENST00000540700 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
UBC-208ENST00000540700 MIR7-3HGQ8N6C7 128 aa10.44□□□□□ -0.74
UBC-208ENST00000540700 DAND5Q8N907 189 aa10.44□□□□□ -0.74
UBC-208ENST00000540700 LITAFQ99732 161 aa10.44□□□□□ -0.74
UBC-208ENST00000540700 PKHD1L1Q86WI1 4243 aa10.44□□□□□ -0.74
UBC-208ENST00000540700 PHF5AQ7RTV0 110 aaKnown RBP10.42□□□□□ -0.74
UBC-208ENST00000540700 RNF213Q63HN8 5207 aa10.42□□□□□ -0.74
UBC-208ENST00000540700 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
UBC-208ENST00000540700 EIF4EBP3O60516 100 aaPredicted RBP10.41□□□□□ -0.74
UBC-208ENST00000540700 OXTP01178 125 aa10.41□□□□□ -0.74
UBC-208ENST00000540700 KRTAP11-1Q8IUC1 163 aa10.41□□□□□ -0.74
UBC-208ENST00000540700 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
UBC-208ENST00000540700 PAM16Q9Y3D7 125 aa10.4□□□□□ -0.74
UBC-208ENST00000540700 LOC105371267A0A1B0GV96 52 aa10.38□□□□□ -0.75
UBC-208ENST00000540700 M0QXV9 152 aa10.38□□□□□ -0.75
UBC-208ENST00000540700 VPREB1P12018 145 aa10.38□□□□□ -0.75
UBC-208ENST00000540700 KRTAP10-4P60372 401 aaPredicted RBP10.38□□□□□ -0.75
UBC-208ENST00000540700 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
UBC-208ENST00000540700 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
UBC-208ENST00000540700 LINC00587B1AMM8 73 aa10.37□□□□□ -0.75
UBC-208ENST00000540700 TIMM17BO60830 172 aa10.37□□□□□ -0.75
UBC-208ENST00000540700 IGLV5-37A0A075B6J1 123 aa10.36□□□□□ -0.75
UBC-208ENST00000540700 NPC2P61916 151 aa10.36□□□□□ -0.75
UBC-208ENST00000540700 VAMP8Q9BV40 100 aa10.36□□□□□ -0.75
UBC-208ENST00000540700 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
UBC-208ENST00000540700 COX8AP10176 69 aa10.35□□□□□ -0.75
UBC-208ENST00000540700 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
UBC-208ENST00000540700 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
UBC-208ENST00000540700 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
UBC-208ENST00000540700 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
UBC-208ENST00000540700 C14orf144Q96I85 54 aa10.34□□□□□ -0.75
UBC-208ENST00000540700 LRP2P98164 4655 aa10.33□□□□□ -0.76
UBC-208ENST00000540700 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
UBC-208ENST00000540700 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
UBC-208ENST00000540700 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
UBC-208ENST00000540700 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
UBC-208ENST00000540700 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
UBC-208ENST00000540700 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
UBC-208ENST00000540700 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
UBC-208ENST00000540700 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
UBC-208ENST00000540700 NCR3O14931 201 aa10.29□□□□□ -0.76
UBC-208ENST00000540700 DLEU1O43261 78 aa10.29□□□□□ -0.76
UBC-208ENST00000540700 PSORS1C2Q9UIG4 136 aa10.29□□□□□ -0.76
UBC-208ENST00000540700 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
UBC-208ENST00000540700 TMEM238C9JI98 176 aa10.28□□□□□ -0.76
UBC-208ENST00000540700 HNRNPA3P51991 378 aaKnown RBP10.28□□□□□ -0.76
UBC-208ENST00000540700 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
UBC-208ENST00000540700 C2orf91Q6ZV80 131 aa10.28□□□□□ -0.76
UBC-208ENST00000540700 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
UBC-208ENST00000540700 UBE2BP63146 152 aa10.26□□□□□ -0.77
UBC-208ENST00000540700 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
UBC-208ENST00000540700 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
UBC-208ENST00000540700 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
UBC-208ENST00000540700 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
UBC-208ENST00000540700 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
UBC-208ENST00000540700 SLC25A34Q6PIV7 304 aa10.25□□□□□ -0.77
UBC-208ENST00000540700 MIEN1Q9BRT3 115 aa10.25□□□□□ -0.77
UBC-208ENST00000540700 IGLV1-50A0A075B6I6 118 aa10.24□□□□□ -0.77
UBC-208ENST00000540700 M0R378 163 aa10.24□□□□□ -0.77
UBC-208ENST00000540700 NDUFC2O95298 119 aa10.24□□□□□ -0.77
UBC-208ENST00000540700 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
UBC-208ENST00000540700 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
UBC-208ENST00000540700 IFITM1P13164 125 aa10.22□□□□□ -0.77
UBC-208ENST00000540700 Q6ZVH6 145 aa10.22□□□□□ -0.77
UBC-208ENST00000540700 TRBV10-3A0A0K0K1G6 114 aa10.21□□□□□ -0.77
UBC-208ENST00000540700 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
UBC-208ENST00000540700 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
UBC-208ENST00000540700 HIGD1BQ9P298 99 aa10.21□□□□□ -0.77
UBC-208ENST00000540700 MT1HL1P0DM35 61 aa10.2□□□□□ -0.78
UBC-208ENST00000540700 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
UBC-208ENST00000540700 S100A12P80511 92 aa10.19□□□□□ -0.78
UBC-208ENST00000540700 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
UBC-208ENST00000540700 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
UBC-208ENST00000540700 PRO1933Q9H354 126 aa10.18□□□□□ -0.78
UBC-208ENST00000540700 TNXBP22105 4242 aa10.17□□□□□ -0.78
UBC-208ENST00000540700 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
UBC-208ENST00000540700 DDTP30046 118 aa10.17□□□□□ -0.78
UBC-208ENST00000540700 HIST1H4GQ99525 98 aa10.17□□□□□ -0.78
UBC-208ENST00000540700 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
UBC-208ENST00000540700 KCNQ1DNQ9H478 68 aa10.16□□□□□ -0.78
UBC-208ENST00000540700 A4D1N5 150 aa10.15□□□□□ -0.78
UBC-208ENST00000540700 BCE1O60756 84 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms