RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 HIST1H2BLQ99880 126 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 SACSQ9NZJ4 4579 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 A0A087WYN8 130 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 J3QQQ9 107 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 SCGB1D1O95968 90 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 CHTF8P0CG12 524 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 C9orf116Q5BN46 136 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-212ENST00000539975 SPACA4Q8TDM5 124 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 ZNF625Q96I27 306 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-212ENST00000539975 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 ERG28Q9UKR5 140 aa4.13□□□□□ -1.75
SNHG1-212ENST00000539975 C5orf52A6NGY3 159 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 EPM2AB3EWF7 344 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 E9PLD3 99 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 SMR3BP02814 79 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-212ENST00000539975 XGP55808 180 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 HAMPP81172 84 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
SNHG1-212ENST00000539975 Q6ZRP5 223 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 NKAPP1Q8N9T2 125 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 MIEN1Q9BRT3 115 aa4.12□□□□□ -1.75
SNHG1-212ENST00000539975 TSTD3H0UI37 97 aa4.11□□□□□ -1.75
SNHG1-212ENST00000539975 SCGB1D4Q6XE38 83 aa4.11□□□□□ -1.75
SNHG1-212ENST00000539975 XAGE1AQ9HD64 81 aa4.11□□□□□ -1.75
SNHG1-212ENST00000539975 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
SNHG1-212ENST00000539975 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
SNHG1-212ENST00000539975 UBE2BP63146 152 aa4.1□□□□□ -1.75
SNHG1-212ENST00000539975 FAM19A5Q7Z5A7 132 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-212ENST00000539975 ATOH7Q8N100 152 aa4.1□□□□□ -1.75
SNHG1-212ENST00000539975 COPS9Q8WXC6 57 aa4.1□□□□□ -1.75
SNHG1-212ENST00000539975 ZNF815PA8K554 130 aa4.09□□□□□ -1.75
SNHG1-212ENST00000539975 PANO1I0J062 215 aa4.09□□□□□ -1.75
SNHG1-212ENST00000539975 M0QXV9 152 aa4.09□□□□□ -1.75
SNHG1-212ENST00000539975 SMIM13P0DJ93 91 aa4.09□□□□□ -1.75
SNHG1-212ENST00000539975 RPL37AP61513 92 aaKnown RBP4.09□□□□□ -1.75
SNHG1-212ENST00000539975 Q5VSD8 79 aa4.09□□□□□ -1.75
SNHG1-212ENST00000539975 A0A1W2PNN7 141 aa4.08□□□□□ -1.76
SNHG1-212ENST00000539975 MIR7-3HGQ8N6C7 128 aa4.08□□□□□ -1.76
SNHG1-212ENST00000539975 C14orf144Q96I85 54 aa4.08□□□□□ -1.76
SNHG1-212ENST00000539975 SND1-IT1Q9HBX3 110 aa4.08□□□□□ -1.76
SNHG1-212ENST00000539975 DNAH6Q9C0G6 4158 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 A0A1B0GV90 55 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 TMEM238C9JI98 176 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 C9orf129Q5T035 196 aaKnown RBP4.07□□□□□ -1.76
SNHG1-212ENST00000539975 MRPL55Q7Z7F7 128 aaKnown RBP4.07□□□□□ -1.76
SNHG1-212ENST00000539975 BOD1L2Q8IYS8 172 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 C22orf24Q9Y442 160 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
SNHG1-212ENST00000539975 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 DDTP30046 118 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 PHF5AQ7RTV0 110 aaKnown RBP4.06□□□□□ -1.76
SNHG1-212ENST00000539975 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 TP73-AS1Q9UF72 201 aa4.06□□□□□ -1.76
SNHG1-212ENST00000539975 IGKV2D-26A0A0A0MRZ7 120 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 GAGE10A6NGK3 116 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 M0R378 163 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 DLEU1O43261 78 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 TIMM17BO60830 172 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 INAFM2P0DMQ5 153 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 SRSF9Q13242 221 aaKnown RBP eCLIP4.05□□□□□ -1.76
SNHG1-212ENST00000539975 C1orf137Q5JT78 98 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 S100A7L2Q5SY68 101 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 Q6ZVH6 145 aa4.05□□□□□ -1.76
SNHG1-212ENST00000539975 A4D1N5 150 aa4.04□□□□□ -1.76
SNHG1-212ENST00000539975 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
SNHG1-212ENST00000539975 JOSD1Q15040 202 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-212ENST00000539975 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
SNHG1-212ENST00000539975 DAND5Q8N907 189 aa4.04□□□□□ -1.76
SNHG1-212ENST00000539975 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 IGLV5-37A0A075B6J1 123 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 IGKV2-28A0A075B6P5 120 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 IGKV2D-28P01615 120 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 IFITM1P13164 125 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 HINT1P49773 126 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-212ENST00000539975 NPC2P61916 151 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 SPATA45Q537H7 98 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 LINC00167Q96N53 147 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 PKD1P98161 4303 aa4.03□□□□□ -1.76
SNHG1-212ENST00000539975 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.77
SNHG1-212ENST00000539975 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 TRBV10-2A0A0K0K1G8 114 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 M0R143 59 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 NCR3O14931 201 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 NDUFC2O95298 119 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 VPREB1P12018 145 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 RPL28P46779 137 aaKnown RBP4.02□□□□□ -1.77
SNHG1-212ENST00000539975 UBE2AP49459 152 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
SNHG1-212ENST00000539975 REG3GQ6UW15 175 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 PCP2Q8IVA1 136 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 OR13C6PQ8NH95 151 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 LINC00308Q8TCZ7 52 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
SNHG1-212ENST00000539975 SPANXB1Q9NS25 103 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-212ENST00000539975 SPANXCQ9NY87 97 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms