RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
LTBR-207ENST00000539925 H3BT86 120 aa11.34□□□□□ -0.59
LTBR-207ENST00000539925 DNAH9Q9NYC9 4486 aa11.34□□□□□ -0.59
LTBR-207ENST00000539925 CBY1Q9Y3M2 126 aa11.33□□□□□ -0.6
LTBR-207ENST00000539925 ETDBQ3ZM63 59 aa11.33□□□□□ -0.6
LTBR-207ENST00000539925 TEN1Q86WV5 123 aa11.33□□□□□ -0.6
LTBR-207ENST00000539925 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
LTBR-207ENST00000539925 CLEC2BQ92478 149 aa11.33□□□□□ -0.6
LTBR-207ENST00000539925 USP17L23D6RBM5 183 aa11.32□□□□□ -0.6
LTBR-207ENST00000539925 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
LTBR-207ENST00000539925 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
LTBR-207ENST00000539925 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
LTBR-207ENST00000539925 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
LTBR-207ENST00000539925 A0A1B0GX51 115 aa11.29□□□□□ -0.6
LTBR-207ENST00000539925 SNCGO76070 127 aa11.29□□□□□ -0.6
LTBR-207ENST00000539925 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
LTBR-207ENST00000539925 PPDPFLQ8WWR9 84 aa11.28□□□□□ -0.6
LTBR-207ENST00000539925 NCR3O14931 201 aa11.27□□□□□ -0.61
LTBR-207ENST00000539925 DNAL4O96015 105 aa11.26□□□□□ -0.61
LTBR-207ENST00000539925 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
LTBR-207ENST00000539925 PSCAO43653 123 aa11.25□□□□□ -0.61
LTBR-207ENST00000539925 XAGE1AQ9HD64 81 aa11.25□□□□□ -0.61
LTBR-207ENST00000539925 M0R378 163 aa11.24□□□□□ -0.61
LTBR-207ENST00000539925 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
LTBR-207ENST00000539925 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
LTBR-207ENST00000539925 VPREB1P12018 145 aa11.23□□□□□ -0.61
LTBR-207ENST00000539925 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
LTBR-207ENST00000539925 Q6ZRP5 223 aa11.23□□□□□ -0.61
LTBR-207ENST00000539925 PLA2G2DQ9UNK4 145 aa11.23□□□□□ -0.61
LTBR-207ENST00000539925 Q8NDZ9 215 aa11.22□□□□□ -0.61
LTBR-207ENST00000539925 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
LTBR-207ENST00000539925 GAGE2EQ4V326 116 aa11.21□□□□□ -0.61
LTBR-207ENST00000539925 CASC10Q5T4H9 136 aa11.21□□□□□ -0.61
LTBR-207ENST00000539925 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.61
LTBR-207ENST00000539925 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
LTBR-207ENST00000539925 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
LTBR-207ENST00000539925 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
LTBR-207ENST00000539925 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
LTBR-207ENST00000539925 BAALC-AS2P0C853 105 aa11.19□□□□□ -0.62
LTBR-207ENST00000539925 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
LTBR-207ENST00000539925 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
LTBR-207ENST00000539925 SLPIP03973 132 aa11.18□□□□□ -0.62
LTBR-207ENST00000539925 C6orf99Q4VX62 202 aa11.18□□□□□ -0.62
LTBR-207ENST00000539925 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
LTBR-207ENST00000539925 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 A0A087WYN8 130 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 H3BQ85 93 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 LECT2O14960 151 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 NKAPP1Q8N9T2 125 aa11.17□□□□□ -0.62
LTBR-207ENST00000539925 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
LTBR-207ENST00000539925 C9orf129Q5T035 196 aaKnown RBP11.16□□□□□ -0.62
LTBR-207ENST00000539925 DYNC2H1Q8NCM8 4307 aaKnown RBP11.16□□□□□ -0.62
LTBR-207ENST00000539925 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
LTBR-207ENST00000539925 ORMDL1Q9P0S3 153 aa11.14□□□□□ -0.63
LTBR-207ENST00000539925 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
LTBR-207ENST00000539925 GHRHP01286 108 aa11.14□□□□□ -0.63
LTBR-207ENST00000539925 Q8N814 137 aa11.14□□□□□ -0.63
LTBR-207ENST00000539925 LINC00575Q6W349 94 aa11.13□□□□□ -0.63
LTBR-207ENST00000539925 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
LTBR-207ENST00000539925 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
LTBR-207ENST00000539925 hADV29S1A0JD25 119 aa11.1□□□□□ -0.63
LTBR-207ENST00000539925 TMEM256-PLSCR3K7ERE1 68 aa11.1□□□□□ -0.63
LTBR-207ENST00000539925 GAGE2BQ13066 116 aa11.1□□□□□ -0.63
LTBR-207ENST00000539925 DNHD1Q96M86 4753 aa11.09□□□□□ -0.63
LTBR-207ENST00000539925 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
LTBR-207ENST00000539925 COX7BP24311 80 aa11.09□□□□□ -0.63
LTBR-207ENST00000539925 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
LTBR-207ENST00000539925 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
LTBR-207ENST00000539925 Q6ZRN7 208 aaPredicted RBP11.08□□□□□ -0.64
LTBR-207ENST00000539925 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
LTBR-207ENST00000539925 FAM240AA0A1B0GVK7 77 aa11.07□□□□□ -0.64
LTBR-207ENST00000539925 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
LTBR-207ENST00000539925 SERTAD4-AS1Q5TG53 156 aa11.07□□□□□ -0.64
LTBR-207ENST00000539925 C7orf33Q8WU49 177 aa11.07□□□□□ -0.64
LTBR-207ENST00000539925 DNAH1Q9P2D7 4330 aa11.07□□□□□ -0.64
LTBR-207ENST00000539925 PRKDCP78527 4128 aaKnown RBP11.06□□□□□ -0.64
LTBR-207ENST00000539925 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
LTBR-207ENST00000539925 PRYO14603 147 aa11.05□□□□□ -0.64
LTBR-207ENST00000539925 ACYP1P07311 99 aa11.04□□□□□ -0.64
LTBR-207ENST00000539925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.04□□□□□ -0.64
LTBR-207ENST00000539925 JMJD7-PLA2G4BH0Y9G9 81 aa11.04□□□□□ -0.64
LTBR-207ENST00000539925 Q6ZR54 194 aa11.04□□□□□ -0.64
LTBR-207ENST00000539925 LINC00474Q9P2X8 69 aa11.04□□□□□ -0.64
LTBR-207ENST00000539925 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
LTBR-207ENST00000539925 C9orf163Q8N9P6 203 aa11.03□□□□□ -0.64
LTBR-207ENST00000539925 C22orf24Q9Y442 160 aa11.03□□□□□ -0.64
LTBR-207ENST00000539925 OBSCN-AS1Q96MR7 158 aa11.02□□□□□ -0.64
LTBR-207ENST00000539925 IGLV1-50A0A075B6I6 118 aa11.01□□□□□ -0.65
LTBR-207ENST00000539925 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
LTBR-207ENST00000539925 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
LTBR-207ENST00000539925 A0A096LNI7 61 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 C3orf84H3BNL1 204 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 M0R2N4 97 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 SPRR1AP35321 89 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 FAM19A5Q7Z5A7 132 aaPredicted RBP10.98□□□□□ -0.65
LTBR-207ENST00000539925 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 DHRS4-AS1Q9P1J3 65 aa10.98□□□□□ -0.65
LTBR-207ENST00000539925 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms