RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 ERG28Q9UKR5 140 aa12.19□□□□□ -0.46
LINC00943-205ENST00000539315 A0A0J9YXY3 114 aa12.18□□□□□ -0.46
LINC00943-205ENST00000539315 SERTAD4-AS1Q5TG53 156 aa12.18□□□□□ -0.46
LINC00943-205ENST00000539315 PFN2P35080 140 aa12.17□□□□□ -0.46
LINC00943-205ENST00000539315 LINC00158P58513 81 aa12.17□□□□□ -0.46
LINC00943-205ENST00000539315 C9orf116Q5BN46 136 aaPredicted RBP12.17□□□□□ -0.46
LINC00943-205ENST00000539315 LOC107984640A0A0U1RRK4 108 aa12.15□□□□□ -0.46
LINC00943-205ENST00000539315 TIMM17BO60830 172 aa12.15□□□□□ -0.46
LINC00943-205ENST00000539315 SMIM13P0DJ93 91 aa12.15□□□□□ -0.46
LINC00943-205ENST00000539315 NDUFC2-KCTD14E9PQ53 114 aa12.14□□□□□ -0.47
LINC00943-205ENST00000539315 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
LINC00943-205ENST00000539315 A0A0U1RRA0 63 aa12.13□□□□□ -0.47
LINC00943-205ENST00000539315 TLX1NBP0CAT3 122 aa12.13□□□□□ -0.47
LINC00943-205ENST00000539315 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
LINC00943-205ENST00000539315 TMEM238C9JI98 176 aa12.12□□□□□ -0.47
LINC00943-205ENST00000539315 OXTP01178 125 aa12.12□□□□□ -0.47
LINC00943-205ENST00000539315 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
LINC00943-205ENST00000539315 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
LINC00943-205ENST00000539315 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
LINC00943-205ENST00000539315 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
LINC00943-205ENST00000539315 MIEN1Q9BRT3 115 aa12.1□□□□□ -0.47
LINC00943-205ENST00000539315 GAGE2BQ13066 116 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00943-205ENST00000539315 GAGE2EQ4V326 116 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 Q6ZVH6 145 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 MIR7-3HGQ8N6C7 128 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 HIGD1BQ9P298 99 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 GAGE2DQ9UEU5 116 aa12.09□□□□□ -0.47
LINC00943-205ENST00000539315 ADAMTSL4-AS1Q5T5F5 129 aa12.08□□□□□ -0.48
LINC00943-205ENST00000539315 Q6ZRP5 223 aa12.08□□□□□ -0.48
LINC00943-205ENST00000539315 COPS9Q8WXC6 57 aa12.07□□□□□ -0.48
LINC00943-205ENST00000539315 LITAFQ99732 161 aa12.07□□□□□ -0.48
LINC00943-205ENST00000539315 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
LINC00943-205ENST00000539315 PLA2G2DQ9UNK4 145 aa12.07□□□□□ -0.48
LINC00943-205ENST00000539315 DPH3Q96FX2 82 aa12.06□□□□□ -0.48
LINC00943-205ENST00000539315 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
LINC00943-205ENST00000539315 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
LINC00943-205ENST00000539315 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
LINC00943-205ENST00000539315 TP73-AS1Q9UF72 201 aa12.06□□□□□ -0.48
LINC00943-205ENST00000539315 PTTG1IPP53801 180 aa12.05□□□□□ -0.48
LINC00943-205ENST00000539315 DAND5Q8N907 189 aa12.05□□□□□ -0.48
LINC00943-205ENST00000539315 SND1-IT1Q9HBX3 110 aa12.05□□□□□ -0.48
LINC00943-205ENST00000539315 IFITM1P13164 125 aa12.04□□□□□ -0.48
LINC00943-205ENST00000539315 HNRNPA3P51991 378 aaKnown RBP12.04□□□□□ -0.48
LINC00943-205ENST00000539315 HIST1H4GQ99525 98 aa12.04□□□□□ -0.48
LINC00943-205ENST00000539315 A0A096LNI7 61 aa12.03□□□□□ -0.48
LINC00943-205ENST00000539315 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
LINC00943-205ENST00000539315 C2orf91Q6ZV80 131 aa12.03□□□□□ -0.48
LINC00943-205ENST00000539315 XAGE1AQ9HD64 81 aa12.03□□□□□ -0.48
LINC00943-205ENST00000539315 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
LINC00943-205ENST00000539315 TAL2Q16559 108 aa12.01□□□□□ -0.49
LINC00943-205ENST00000539315 LOC107984156A0A0G2JMH3 177 aa12□□□□□ -0.49
LINC00943-205ENST00000539315 NPC2P61916 151 aa12□□□□□ -0.49
LINC00943-205ENST00000539315 MUSTN1Q8IVN3 82 aa12□□□□□ -0.49
LINC00943-205ENST00000539315 ARL17AQ8IVW1 177 aa12□□□□□ -0.49
LINC00943-205ENST00000539315 TNXBP22105 4242 aa11.99□□□□□ -0.49
LINC00943-205ENST00000539315 RPL24P83731 157 aaKnown RBP11.99□□□□□ -0.49
LINC00943-205ENST00000539315 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
LINC00943-205ENST00000539315 RPL37AP61513 92 aaKnown RBP11.98□□□□□ -0.49
LINC00943-205ENST00000539315 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
LINC00943-205ENST00000539315 LRP2P98164 4655 aa11.98□□□□□ -0.49
LINC00943-205ENST00000539315 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
LINC00943-205ENST00000539315 MT1HL1P0DM35 61 aa11.96□□□□□ -0.49
LINC00943-205ENST00000539315 HSD52Q0P140 79 aa11.96□□□□□ -0.49
LINC00943-205ENST00000539315 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.49
LINC00943-205ENST00000539315 SOSTDC1Q6X4U4 206 aa11.95□□□□□ -0.5
LINC00943-205ENST00000539315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.95□□□□□ -0.5
LINC00943-205ENST00000539315 NDUFC2O95298 119 aa11.94□□□□□ -0.5
LINC00943-205ENST00000539315 DDTP30046 118 aa11.94□□□□□ -0.5
LINC00943-205ENST00000539315 RNF213Q63HN8 5207 aa11.94□□□□□ -0.5
LINC00943-205ENST00000539315 PANO1I0J062 215 aa11.93□□□□□ -0.5
LINC00943-205ENST00000539315 CTAG1AP78358 180 aa11.93□□□□□ -0.5
LINC00943-205ENST00000539315 CEND1Q8N111 149 aa11.93□□□□□ -0.5
LINC00943-205ENST00000539315 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
LINC00943-205ENST00000539315 NKAPP1Q8N9T2 125 aa11.92□□□□□ -0.5
LINC00943-205ENST00000539315 A0A1W2PNN7 141 aa11.91□□□□□ -0.5
LINC00943-205ENST00000539315 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
LINC00943-205ENST00000539315 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
LINC00943-205ENST00000539315 A0A087WYN8 130 aa11.9□□□□□ -0.5
LINC00943-205ENST00000539315 TMEM238LA0A1B0GVL6 79 aa11.9□□□□□ -0.5
LINC00943-205ENST00000539315 A6NJY4 79 aa11.9□□□□□ -0.5
LINC00943-205ENST00000539315 IGLV5-37A0A075B6J1 123 aa11.89□□□□□ -0.51
LINC00943-205ENST00000539315 A4D1N5 150 aa11.89□□□□□ -0.51
LINC00943-205ENST00000539315 VPREB1P12018 145 aa11.89□□□□□ -0.51
LINC00943-205ENST00000539315 LBHQ53QV2 105 aaPredicted RBP11.89□□□□□ -0.51
LINC00943-205ENST00000539315 PLAC8Q9NZF1 115 aa11.89□□□□□ -0.51
LINC00943-205ENST00000539315 C22orf24Q9Y442 160 aa11.89□□□□□ -0.51
LINC00943-205ENST00000539315 M0R143 59 aa11.88□□□□□ -0.51
LINC00943-205ENST00000539315 M0R378 163 aa11.88□□□□□ -0.51
LINC00943-205ENST00000539315 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
LINC00943-205ENST00000539315 PRR3P79522 188 aaKnown RBP11.87□□□□□ -0.51
LINC00943-205ENST00000539315 PCP4L1A6NKN8 68 aa11.85□□□□□ -0.51
LINC00943-205ENST00000539315 M0QXV9 152 aa11.85□□□□□ -0.51
LINC00943-205ENST00000539315 NCR3O14931 201 aa11.85□□□□□ -0.51
LINC00943-205ENST00000539315 KRTAP7-1Q8IUC3 87 aa11.85□□□□□ -0.51
LINC00943-205ENST00000539315 Q8NDZ9 215 aa11.85□□□□□ -0.51
LINC00943-205ENST00000539315 HINT1P49773 126 aaPredicted RBP11.84□□□□□ -0.51
LINC00943-205ENST00000539315 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
LINC00943-205ENST00000539315 BVES-AS1Q5T3Y7 98 aa11.84□□□□□ -0.51
LINC00943-205ENST00000539315 MRPL55Q7Z7F7 128 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms