RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 HIST1H4GQ99525 98 aa5.46□□□□□ -1.54
LPCAT3-208ENST00000538987 PRO1933Q9H354 126 aa5.46□□□□□ -1.54
LPCAT3-208ENST00000538987 UQCR10Q9UDW1 63 aa5.46□□□□□ -1.54
LPCAT3-208ENST00000538987 Q6ZSA8 131 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 Q6ZVH6 145 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 LITAFQ99732 161 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
LPCAT3-208ENST00000538987 M0QXV9 152 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 IFITM1P13164 125 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 SERTAD4-AS1Q5TG53 156 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 SPANXB1Q9NS25 103 aaPredicted RBP5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 PLAC8Q9NZF1 115 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 PLA2G2DQ9UNK4 145 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
LPCAT3-208ENST00000538987 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 TSTD3H0UI37 97 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 NCR3O14931 201 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 SMR3BP02814 79 aaPredicted RBP5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 XGP55808 180 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 UBE2BP63146 152 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 PRR3P79522 188 aaKnown RBP5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 LBHQ53QV2 105 aaPredicted RBP5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 LINC00518Q8N0U6 118 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 C7orf33Q8WU49 177 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 HIGD1BQ9P298 99 aa5.43□□□□□ -1.54
LPCAT3-208ENST00000538987 EIF4EBP3O60516 100 aaPredicted RBP5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 VPREB1P12018 145 aa5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 HNRNPA3P51991 378 aaKnown RBP5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 SOSTDC1Q6X4U4 206 aa5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 C2orf91Q6ZV80 131 aa5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
LPCAT3-208ENST00000538987 LOC107984156A0A0G2JMH3 177 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 RPL37AP8A6NKH3 93 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 M0R378 163 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 NDUFC2O95298 119 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 S100A7L2Q5SY68 101 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 ARL17AQ8IVW1 177 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 OR13C6PQ8NH95 151 aa5.41□□□□□ -1.54
LPCAT3-208ENST00000538987 IGLV5-37A0A075B6J1 123 aa5.4□□□□□ -1.54
LPCAT3-208ENST00000538987 TAL2Q16559 108 aa5.4□□□□□ -1.54
LPCAT3-208ENST00000538987 Q8NDZ9 215 aa5.4□□□□□ -1.54
LPCAT3-208ENST00000538987 LINC00167Q96N53 147 aa5.4□□□□□ -1.54
LPCAT3-208ENST00000538987 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 A4D1N5 150 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 A6NDN8 102 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 CEND1Q8N111 149 aa5.39□□□□□ -1.55
LPCAT3-208ENST00000538987 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 TRBV10-2A0A0K0K1G8 114 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 EPM2AB3EWF7 344 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 DDTP30046 118 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 HSD52Q0P140 79 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 LINC00528Q8N1L1 170 aa5.38□□□□□ -1.55
LPCAT3-208ENST00000538987 IGLV1-50A0A075B6I6 118 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 TRBV10-3A0A0K0K1G6 114 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 TMEM238LA0A1B0GVL6 79 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 A6NJY4 79 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 RPL37AP61513 92 aaKnown RBP5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 CTAG1AP78358 180 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 RAB37Q96AX2 223 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 PPDPFQ9H3Y8 114 aa5.37□□□□□ -1.55
LPCAT3-208ENST00000538987 DNAH5Q8TE73 4624 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 PKHD1P08F94 4074 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 C1orf137Q5JT78 98 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 TMEM126AQ9H061 195 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 CBY1Q9Y3M2 126 aa5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
LPCAT3-208ENST00000538987 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 PLA2G1BP04054 148 aaKnown RBP5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 HINT1P49773 126 aaPredicted RBP5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 PSORS1C2Q9UIG4 136 aa5.35□□□□□ -1.55
LPCAT3-208ENST00000538987 TRAV23DV6A0A075B6W5 121 aa5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 M0R143 59 aa5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 IGLV6-57P01721 117 aa5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 FXYD2P54710 66 aa5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 NHP2Q9NX24 153 aaKnown RBP5.34□□□□□ -1.55
LPCAT3-208ENST00000538987 LRP1BQ9NZR2 4599 aa5.34□□□□□ -1.56
LPCAT3-208ENST00000538987 ETDCA0A1B0GVM5 59 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 PCP4L1A6NKN8 68 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 H7C2G1 150 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 PRYO14603 147 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 CFC1BP0CG36 223 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 CFC1P0CG37 223 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 BVES-AS1Q5T3Y7 98 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 Q5VSD8 79 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 FAM19A1Q7Z5A9 133 aa5.33□□□□□ -1.56
LPCAT3-208ENST00000538987 BCE1O60756 84 aa5.32□□□□□ -1.56
LPCAT3-208ENST00000538987 RPL13AP40429 203 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms