RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 Q8NDZ9 215 aa5.91□□□□□ -1.46
UBE3B-208ENST00000538070 WFDC9Q8NEX5 89 aa5.91□□□□□ -1.46
UBE3B-208ENST00000538070 B5MCH6 92 aa5.9□□□□□ -1.46
UBE3B-208ENST00000538070 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.46
UBE3B-208ENST00000538070 H0YGX0 51 aa5.9□□□□□ -1.47
UBE3B-208ENST00000538070 TENM2Q9NT68 2774 aa5.89□□□□□ -1.47
UBE3B-208ENST00000538070 LAMTOR3Q9UHA4 124 aa5.89□□□□□ -1.47
UBE3B-208ENST00000538070 ESRGQ1W209 222 aa5.89□□□□□ -1.47
UBE3B-208ENST00000538070 TMEM126AQ9H061 195 aa5.89□□□□□ -1.47
UBE3B-208ENST00000538070 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
UBE3B-208ENST00000538070 NDUFV3P56181 108 aaKnown RBP5.88□□□□□ -1.47
UBE3B-208ENST00000538070 SDIM1Q6ZPB5 146 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 SMCR5Q8TEV8 140 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 C1orf43Q9BWL3 253 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 INAFM2P0DMQ5 153 aa5.88□□□□□ -1.47
UBE3B-208ENST00000538070 CXCL5P42830 114 aa5.87□□□□□ -1.47
UBE3B-208ENST00000538070 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
UBE3B-208ENST00000538070 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
UBE3B-208ENST00000538070 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
UBE3B-208ENST00000538070 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
UBE3B-208ENST00000538070 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
UBE3B-208ENST00000538070 Q6ZRU5 148 aa5.85□□□□□ -1.47
UBE3B-208ENST00000538070 Q8N814 137 aa5.85□□□□□ -1.47
UBE3B-208ENST00000538070 C5orf47Q569G3 176 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 Q6ZQY7 126 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 KLK5Q9Y337 293 aaPredicted RBP5.84□□□□□ -1.47
UBE3B-208ENST00000538070 ANK2Q01484 3957 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 A0A087WVE0 104 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 SEC61GP60059 68 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 DEFB105AQ8NG35 78 aa5.84□□□□□ -1.47
UBE3B-208ENST00000538070 LINC00846Q9NV44 126 aa5.84□□□□□ -1.48
UBE3B-208ENST00000538070 COX17Q14061 63 aa5.83□□□□□ -1.48
UBE3B-208ENST00000538070 hADV29S1A0JD25 119 aa5.83□□□□□ -1.48
UBE3B-208ENST00000538070 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
UBE3B-208ENST00000538070 PRR34Q9NV39 138 aa5.82□□□□□ -1.48
UBE3B-208ENST00000538070 LINC00643Q86TS7 51 aa5.81□□□□□ -1.48
UBE3B-208ENST00000538070 PPDPFQ9H3Y8 114 aa5.81□□□□□ -1.48
UBE3B-208ENST00000538070 RPL37AP8A6NKH3 93 aa5.81□□□□□ -1.48
UBE3B-208ENST00000538070 ACYP1P07311 99 aa5.81□□□□□ -1.48
UBE3B-208ENST00000538070 TRAV23DV6A0A075B6W5 121 aa5.81□□□□□ -1.48
UBE3B-208ENST00000538070 FAM240AA0A1B0GVK7 77 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 CASC10Q5T4H9 136 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 HAMPP81172 84 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 TMEM256-PLSCR3K7ERE1 68 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 NKAPP1Q8N9T2 125 aa5.8□□□□□ -1.48
UBE3B-208ENST00000538070 NDUFC2O95298 119 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 SYCNQ0VAF6 134 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 LINC00575Q6W349 94 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 LINC01561Q8N1V8 128 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 ZNF73O43830 326 aaPredicted RBP5.79□□□□□ -1.48
UBE3B-208ENST00000538070 SCXQ7RTU7 201 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
UBE3B-208ENST00000538070 RBM3P98179 157 aaKnown RBP5.78□□□□□ -1.48
UBE3B-208ENST00000538070 Q6ZRP5 223 aa5.78□□□□□ -1.48
UBE3B-208ENST00000538070 COX7BP24311 80 aa5.78□□□□□ -1.48
UBE3B-208ENST00000538070 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 M0R2N4 97 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 LINC01600Q96MT4 127 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 DSCR8Q96T75 97 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
UBE3B-208ENST00000538070 FAM19A5Q7Z5A7 132 aaPredicted RBP5.76□□□□□ -1.49
UBE3B-208ENST00000538070 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.76□□□□□ -1.49
UBE3B-208ENST00000538070 USP17L23D6RBM5 183 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 JMJD7-PLA2G4BH0Y9G9 81 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 WIPF1O43516 503 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 UBE2DNLQ8IWF7 75 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 TRAV10A0A0B4J240 114 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 NDUFC2-KCTD14E9PQ53 114 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 K7EIL1 84 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 PSCAO43653 123 aa5.76□□□□□ -1.49
UBE3B-208ENST00000538070 A0A1B0GX51 115 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 CCKP06307 115 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 EGFEM1PQ0D2K5 195 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 C9orf153Q5TBE3 101 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 UBL5Q9BZL1 73 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 IGLV6-57P01721 117 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 Q6Q795 121 aa5.75□□□□□ -1.49
UBE3B-208ENST00000538070 TRBV7-7A0A0K0K1E9 115 aa5.74□□□□□ -1.49
UBE3B-208ENST00000538070 LINC01556Q5JQF7 62 aa5.74□□□□□ -1.49
UBE3B-208ENST00000538070 C3orf22Q8N5N4 141 aa5.74□□□□□ -1.49
UBE3B-208ENST00000538070 VPREB1P12018 145 aa5.74□□□□□ -1.49
UBE3B-208ENST00000538070 M0R378 163 aa5.73□□□□□ -1.49
UBE3B-208ENST00000538070 DPH3Q96FX2 82 aa5.73□□□□□ -1.49
UBE3B-208ENST00000538070 F8WDY8 70 aa5.73□□□□□ -1.49
UBE3B-208ENST00000538070 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
UBE3B-208ENST00000538070 H3BNG1 76 aa5.71□□□□□ -1.49
UBE3B-208ENST00000538070 C3orf84H3BNL1 204 aa5.71□□□□□ -1.49
UBE3B-208ENST00000538070 C7orf33Q8WU49 177 aa5.71□□□□□ -1.5
UBE3B-208ENST00000538070 UBE2BP63146 152 aa5.71□□□□□ -1.5
UBE3B-208ENST00000538070 GVQW2A0A096LPI5 108 aaPredicted RBP5.7□□□□□ -1.5
UBE3B-208ENST00000538070 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
UBE3B-208ENST00000538070 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms